Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 RPS27P12-201ENST00000464146 258 ntBASIC8.55□□□□□ -1.04
RNF40O75150 AC105910.1-201ENST00000482585 483 ntBASIC8.55□□□□□ -1.04
RNF40O75150 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC8.55□□□□□ -1.04
RNF40O75150 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC8.55□□□□□ -1.04
RNF40O75150 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC8.55□□□□□ -1.04
RNF40O75150 NIFKP7-201ENST00000503365 834 ntBASIC8.55□□□□□ -1.04
RNF40O75150 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC8.55□□□□□ -1.04
RNF40O75150 BTF3P13-201ENST00000513224 490 ntBASIC8.55□□□□□ -1.04
RNF40O75150 AC017037.2-201ENST00000513850 890 ntBASIC8.55□□□□□ -1.04
RNF40O75150 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC8.55□□□□□ -1.04
RNF40O75150 RNU6-1225P-201ENST00000516336 65 ntBASIC8.55□□□□□ -1.04
RNF40O75150 AC090707.1-201ENST00000528795 396 ntTSL 2 BASIC8.55□□□□□ -1.04
RNF40O75150 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC8.55□□□□□ -1.04
RNF40O75150 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC8.55□□□□□ -1.04
RNF40O75150 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC8.55□□□□□ -1.04
RNF40O75150 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC8.55□□□□□ -1.04
RNF40O75150 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC8.55□□□□□ -1.04
RNF40O75150 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC8.55□□□□□ -1.04
RNF40O75150 AC093249.1-201ENST00000567049 203 ntBASIC8.55□□□□□ -1.04
RNF40O75150 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC8.55□□□□□ -1.04
RNF40O75150 TAPT1-AS1-203ENST00000573950 510 ntTSL 3 BASIC8.55□□□□□ -1.04
RNF40O75150 LRRC75A-AS1-220ENST00000579473 585 ntTSL 4 BASIC8.55□□□□□ -1.04
RNF40O75150 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC8.55□□□□□ -1.04
RNF40O75150 MIR4682-201ENST00000580643 80 ntBASIC8.55□□□□□ -1.04
RNF40O75150 AC060766.2-201ENST00000588235 334 ntBASIC8.55□□□□□ -1.04
RNF40O75150 AC007998.3-202ENST00000591141 697 ntTSL 3 BASIC8.55□□□□□ -1.04
RNF40O75150 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC8.55□□□□□ -1.04
RNF40O75150 AC022916.3-201ENST00000592961 742 ntBASIC8.55□□□□□ -1.04
RNF40O75150 AC007621.1-201ENST00000604544 437 ntBASIC8.55□□□□□ -1.04
RNF40O75150 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC8.55□□□□□ -1.04
RNF40O75150 AC103974.2-201ENST00000611319 778 ntBASIC8.55□□□□□ -1.04
RNF40O75150 LINC01002-216ENST00000632351 572 ntTSL 5 BASIC8.55□□□□□ -1.04
RNF40O75150 MIR3120-201ENST00000636555 81 ntBASIC8.55□□□□□ -1.04
RNF40O75150 PTK2-240ENST00000522684 4955 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
RNF40O75150 LARP1BP1-201ENST00000506036 1359 ntBASIC8.55□□□□□ -1.04
RNF40O75150 NCOA4-201ENST00000578454 2307 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
RNF40O75150 RAB27B-201ENST00000262094 7281 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
RNF40O75150 RBBP5-201ENST00000264515 4404 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
RNF40O75150 SERPINA11-201ENST00000334708 1476 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
RNF40O75150 AL049844.3-201ENST00000454207 1496 ntAPPRIS P1 TSL 2 BASIC8.55□□□□□ -1.04
RNF40O75150 TIMM21-204ENST00000580087 2524 ntTSL 5 BASIC8.55□□□□□ -1.04
RNF40O75150 SLC30A8-205ENST00000519688 5242 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
RNF40O75150 CPB1-208ENST00000491148 1773 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
RNF40O75150 OSGEPL1-207ENST00000522700 1779 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
RNF40O75150 IPP-202ENST00000396478 3113 ntAPPRIS P1 TSL 2 BASIC8.55□□□□□ -1.04
RNF40O75150 CNOT7-201ENST00000361272 6913 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
RNF40O75150 FAM13A-AS1-202ENST00000511543 2453 ntTSL 2 BASIC8.55□□□□□ -1.04
RNF40O75150 KCNMB2-204ENST00000432997 2552 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
RNF40O75150 SCIN-209ENST00000519209 2660 ntTSL 2 BASIC8.55□□□□□ -1.04
RNF40O75150 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
RNF40O75150 PCDH18-205ENST00000511115 1331 ntTSL 2 BASIC8.54□□□□□ -1.04
RNF40O75150 LINC01720-201ENST00000413356 2216 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
RNF40O75150 LINC01206-202ENST00000474045 2240 ntTSL 5 BASIC8.54□□□□□ -1.04
RNF40O75150 MAP3K8-202ENST00000375321 2518 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
RNF40O75150 RNF214-204ENST00000530849 2846 ntTSL 5 BASIC8.54□□□□□ -1.04
RNF40O75150 FSTL5-203ENST00000427802 2920 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
RNF40O75150 MED13L-201ENST00000281928 14234 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
RNF40O75150 IFT74-204ENST00000443698 2163 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
RNF40O75150 HTR2A-201ENST00000378688 4835 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
RNF40O75150 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC8.54□□□□□ -1.04
RNF40O75150 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC8.54□□□□□ -1.04
RNF40O75150 PPIH-201ENST00000304979 752 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
RNF40O75150 CTH-201ENST00000346806 1196 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
RNF40O75150 SNORA4.3-201ENST00000365564 137 ntBASIC8.54□□□□□ -1.04
RNF40O75150 CST13P-201ENST00000376992 428 ntBASIC8.54□□□□□ -1.04
RNF40O75150 RNU6-1103P-201ENST00000384150 107 ntBASIC8.54□□□□□ -1.04
RNF40O75150 AL121977.1-201ENST00000401636 979 ntBASIC8.54□□□□□ -1.04
RNF40O75150 RPS24P12-201ENST00000402084 394 ntBASIC8.54□□□□□ -1.04
RNF40O75150 AC098592.2-201ENST00000413158 265 ntBASIC8.54□□□□□ -1.04
RNF40O75150 VDAC1P2-201ENST00000423609 850 ntBASIC8.54□□□□□ -1.04
RNF40O75150 AL356583.2-201ENST00000426536 280 ntBASIC8.54□□□□□ -1.04
RNF40O75150 AL031963.2-201ENST00000433761 398 ntTSL 2 BASIC8.54□□□□□ -1.04
RNF40O75150 LINC00578-201ENST00000439009 542 ntTSL 4 BASIC8.54□□□□□ -1.04
RNF40O75150 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC8.54□□□□□ -1.04
RNF40O75150 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC8.54□□□□□ -1.04
RNF40O75150 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC8.54□□□□□ -1.04
RNF40O75150 AC069213.3-201ENST00000454858 474 ntBASIC8.54□□□□□ -1.04
RNF40O75150 AC117395.1-201ENST00000487390 403 ntBASIC8.54□□□□□ -1.04
RNF40O75150 RN7SL314P-201ENST00000490735 292 ntBASIC8.54□□□□□ -1.04
RNF40O75150 AC093278.1-201ENST00000494700 600 ntBASIC8.54□□□□□ -1.04
RNF40O75150 LEMD1-208ENST00000495594 637 ntTSL 3 BASIC8.54□□□□□ -1.04
RNF40O75150 SNORA19.2-201ENST00000516013 114 ntBASIC8.54□□□□□ -1.04
RNF40O75150 AC124067.1-201ENST00000517897 169 ntTSL 3 BASIC8.54□□□□□ -1.04
RNF40O75150 AC083967.1-201ENST00000522354 515 ntTSL 3 BASIC8.54□□□□□ -1.04
RNF40O75150 OR6C73P-201ENST00000546432 358 ntBASIC8.54□□□□□ -1.04
RNF40O75150 AC137768.1-201ENST00000549998 553 ntBASIC8.54□□□□□ -1.04
RNF40O75150 IGHV1OR15-4-201ENST00000560037 348 ntBASIC8.54□□□□□ -1.04
RNF40O75150 TEX46-202ENST00000566855 510 ntAPPRIS P2 TSL 2 BASIC8.54□□□□□ -1.04
RNF40O75150 RN7SL619P-201ENST00000581753 258 ntBASIC8.54□□□□□ -1.04
RNF40O75150 TTN-AS1-215ENST00000585451 949 ntTSL 5 BASIC8.54□□□□□ -1.04
RNF40O75150 ADGRF5P1-202ENST00000590130 980 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
RNF40O75150 AL512605.2-201ENST00000592972 256 ntBASIC8.54□□□□□ -1.04
RNF40O75150 AC004257.1-201ENST00000593588 277 ntTSL 5 BASIC8.54□□□□□ -1.04
RNF40O75150 RPL12P25-202ENST00000598100 674 ntBASIC8.54□□□□□ -1.04
RNF40O75150 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC8.54□□□□□ -1.04
RNF40O75150 YTHDF2P1-201ENST00000604759 1271 ntBASIC8.54□□□□□ -1.04
RNF40O75150 AC015922.4-201ENST00000612568 690 ntBASIC8.54□□□□□ -1.04
RNF40O75150 MIR6723-201ENST00000621981 89 ntBASIC8.54□□□□□ -1.04
RNF40O75150 AC134981.1-201ENST00000628076 348 ntBASIC8.54□□□□□ -1.04
RNF40O75150 ZNF410-225ENST00000639051 936 ntTSL 5 BASIC8.54□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms