Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 AC138761.5-201ENST00000433967 325 ntBASIC5.58□□□□□ -1.52
SLC28A1O00337 EIF5AP4-201ENST00000441206 465 ntBASIC5.58□□□□□ -1.52
SLC28A1O00337 OR7E116P-201ENST00000448529 957 ntBASIC5.58□□□□□ -1.52
SLC28A1O00337 BX276092.8-201ENST00000455722 250 ntBASIC5.58□□□□□ -1.52
SLC28A1O00337 Z83838.1-202ENST00000456225 839 ntBASIC5.58□□□□□ -1.52
SLC28A1O00337 MTCYBP14-201ENST00000457471 715 ntBASIC5.58□□□□□ -1.52
SLC28A1O00337 AC108751.3-201ENST00000461814 1020 ntBASIC5.58□□□□□ -1.52
SLC28A1O00337 AL157777.1-201ENST00000468100 304 ntBASIC5.58□□□□□ -1.52
SLC28A1O00337 AC098847.1-201ENST00000473094 348 ntBASIC5.58□□□□□ -1.52
SLC28A1O00337 MORF4L2P1-201ENST00000503761 858 ntBASIC5.58□□□□□ -1.52
SLC28A1O00337 GAPDHP71-201ENST00000511530 1003 ntBASIC5.58□□□□□ -1.52
SLC28A1O00337 AC040934.1-201ENST00000523101 513 ntTSL 2 BASIC5.58□□□□□ -1.52
SLC28A1O00337 GLYAT-203ENST00000529732 1070 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
SLC28A1O00337 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.58□□□□□ -1.52
SLC28A1O00337 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC5.58□□□□□ -1.52
SLC28A1O00337 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC5.58□□□□□ -1.52
SLC28A1O00337 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.58□□□□□ -1.52
SLC28A1O00337 AC091078.2-201ENST00000557145 559 ntBASIC5.58□□□□□ -1.52
SLC28A1O00337 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC5.58□□□□□ -1.52
SLC28A1O00337 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
SLC28A1O00337 TEX41-218ENST00000596540 882 ntTSL 5 BASIC5.58□□□□□ -1.52
SLC28A1O00337 AC011500.1-201ENST00000601963 469 ntBASIC5.58□□□□□ -1.52
SLC28A1O00337 RNU6-84P-201ENST00000607737 102 ntBASIC5.58□□□□□ -1.52
SLC28A1O00337 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SLC28A1O00337 uc_338.29-201ENST00000615099 168 ntBASIC5.58□□□□□ -1.52
SLC28A1O00337 AC245014.3-201ENST00000618589 347 ntBASIC5.58□□□□□ -1.52
SLC28A1O00337 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC5.58□□□□□ -1.52
SLC28A1O00337 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC5.58□□□□□ -1.52
SLC28A1O00337 AL136228.1-201ENST00000622221 319 ntBASIC5.58□□□□□ -1.52
SLC28A1O00337 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC5.58□□□□□ -1.52
SLC28A1O00337 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SLC28A1O00337 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC5.58□□□□□ -1.52
SLC28A1O00337 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC5.58□□□□□ -1.52
SLC28A1O00337 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC5.58□□□□□ -1.52
SLC28A1O00337 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SLC28A1O00337 PSG10P-201ENST00000501199 1500 ntBASIC5.58□□□□□ -1.52
SLC28A1O00337 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SLC28A1O00337 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SLC28A1O00337 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SLC28A1O00337 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SLC28A1O00337 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
SLC28A1O00337 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
SLC28A1O00337 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SLC28A1O00337 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.57□□□□□ -1.52
SLC28A1O00337 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SLC28A1O00337 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.57□□□□□ -1.52
SLC28A1O00337 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SLC28A1O00337 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SLC28A1O00337 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SLC28A1O00337 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SLC28A1O00337 MFSD8-219ENST00000641228 2559 ntBASIC5.57□□□□□ -1.52
SLC28A1O00337 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SLC28A1O00337 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC5.57□□□□□ -1.52
SLC28A1O00337 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC5.57□□□□□ -1.52
SLC28A1O00337 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC5.57□□□□□ -1.52
SLC28A1O00337 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC5.57□□□□□ -1.52
SLC28A1O00337 AL356968.2-201ENST00000412769 1257 ntBASIC5.57□□□□□ -1.52
SLC28A1O00337 RPL12P43-201ENST00000420608 499 ntBASIC5.57□□□□□ -1.52
SLC28A1O00337 GAPDHP75-201ENST00000433910 943 ntBASIC5.57□□□□□ -1.52
SLC28A1O00337 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SLC28A1O00337 AC099670.2-201ENST00000435130 321 ntBASIC5.57□□□□□ -1.52
SLC28A1O00337 RPL6P30-201ENST00000443382 862 ntBASIC5.57□□□□□ -1.52
SLC28A1O00337 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC5.57□□□□□ -1.52
SLC28A1O00337 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC5.57□□□□□ -1.52
SLC28A1O00337 AC106822.1-201ENST00000502647 526 ntBASIC5.57□□□□□ -1.52
SLC28A1O00337 AL158068.1-201ENST00000506116 616 ntBASIC5.57□□□□□ -1.52
SLC28A1O00337 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC5.57□□□□□ -1.52
SLC28A1O00337 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC5.57□□□□□ -1.52
SLC28A1O00337 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.57□□□□□ -1.52
SLC28A1O00337 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.57□□□□□ -1.52
SLC28A1O00337 AC084880.3-201ENST00000535921 541 ntTSL 4 BASIC5.57□□□□□ -1.52
SLC28A1O00337 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC5.57□□□□□ -1.52
SLC28A1O00337 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.57□□□□□ -1.52
SLC28A1O00337 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC5.57□□□□□ -1.52
SLC28A1O00337 AC121758.1-202ENST00000556917 658 ntBASIC5.57□□□□□ -1.52
SLC28A1O00337 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
SLC28A1O00337 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.57□□□□□ -1.52
SLC28A1O00337 APOC2-205ENST00000592257 444 ntTSL 3 BASIC5.57□□□□□ -1.52
SLC28A1O00337 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.57□□□□□ -1.52
SLC28A1O00337 AL583832.1-201ENST00000603227 784 ntBASIC5.57□□□□□ -1.52
SLC28A1O00337 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC5.57□□□□□ -1.52
SLC28A1O00337 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC5.57□□□□□ -1.52
SLC28A1O00337 AC004801.6-201ENST00000616571 978 ntBASIC5.57□□□□□ -1.52
SLC28A1O00337 MIR6721-201ENST00000617181 87 ntBASIC5.57□□□□□ -1.52
SLC28A1O00337 AL035661.1-201ENST00000620459 1144 ntBASIC5.57□□□□□ -1.52
SLC28A1O00337 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
SLC28A1O00337 OR11H2-202ENST00000641517 1085 ntBASIC5.57□□□□□ -1.52
SLC28A1O00337 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SLC28A1O00337 NAMPTP1-201ENST00000440465 2514 ntBASIC5.57□□□□□ -1.52
SLC28A1O00337 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SLC28A1O00337 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
SLC28A1O00337 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
SLC28A1O00337 C2CD6-201ENST00000286195 2104 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
SLC28A1O00337 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
SLC28A1O00337 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
SLC28A1O00337 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.57□□□□□ -1.52
SLC28A1O00337 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.57□□□□□ -1.52
SLC28A1O00337 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC5.56□□□□□ -1.52
SLC28A1O00337 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
SLC28A1O00337 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms