Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 AC010082.1-201ENST00000411797 546 ntTSL 2 BASIC4.87□□□□□ -1.63
KCNIP3Q9Y2W7 RPL35AP31-201ENST00000418340 337 ntBASIC4.87□□□□□ -1.63
KCNIP3Q9Y2W7 AL360013.1-201ENST00000419031 858 ntBASIC4.87□□□□□ -1.63
KCNIP3Q9Y2W7 AL034379.1-201ENST00000423216 253 ntBASIC4.87□□□□□ -1.63
KCNIP3Q9Y2W7 ELOBP4-201ENST00000423418 296 ntBASIC4.87□□□□□ -1.63
KCNIP3Q9Y2W7 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC4.87□□□□□ -1.63
KCNIP3Q9Y2W7 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC4.87□□□□□ -1.63
KCNIP3Q9Y2W7 BMS1P11-201ENST00000442351 885 ntBASIC4.87□□□□□ -1.63
KCNIP3Q9Y2W7 MED28P3-201ENST00000444288 531 ntBASIC4.87□□□□□ -1.63
KCNIP3Q9Y2W7 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
KCNIP3Q9Y2W7 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC4.87□□□□□ -1.63
KCNIP3Q9Y2W7 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC4.87□□□□□ -1.63
KCNIP3Q9Y2W7 BMS1P9-201ENST00000457640 885 ntBASIC4.87□□□□□ -1.63
KCNIP3Q9Y2W7 RN7SL188P-201ENST00000469842 285 ntBASIC4.87□□□□□ -1.63
KCNIP3Q9Y2W7 AC006539.1-201ENST00000481419 501 ntBASIC4.87□□□□□ -1.63
KCNIP3Q9Y2W7 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC4.87□□□□□ -1.63
KCNIP3Q9Y2W7 RN7SL350P-201ENST00000492591 299 ntBASIC4.87□□□□□ -1.63
KCNIP3Q9Y2W7 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC4.87□□□□□ -1.63
KCNIP3Q9Y2W7 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC4.87□□□□□ -1.63
KCNIP3Q9Y2W7 RFPL4AP3-201ENST00000515267 345 ntBASIC4.87□□□□□ -1.63
KCNIP3Q9Y2W7 ARL6IP1P3-201ENST00000524544 560 ntBASIC4.87□□□□□ -1.63
KCNIP3Q9Y2W7 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC4.87□□□□□ -1.63
KCNIP3Q9Y2W7 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC4.87□□□□□ -1.63
KCNIP3Q9Y2W7 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC4.87□□□□□ -1.63
KCNIP3Q9Y2W7 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC4.87□□□□□ -1.63
KCNIP3Q9Y2W7 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC4.87□□□□□ -1.63
KCNIP3Q9Y2W7 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC4.87□□□□□ -1.63
KCNIP3Q9Y2W7 CHEK2P2-201ENST00000554701 672 ntBASIC4.87□□□□□ -1.63
KCNIP3Q9Y2W7 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC4.87□□□□□ -1.63
KCNIP3Q9Y2W7 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
KCNIP3Q9Y2W7 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC4.87□□□□□ -1.63
KCNIP3Q9Y2W7 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC4.87□□□□□ -1.63
KCNIP3Q9Y2W7 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC4.87□□□□□ -1.63
KCNIP3Q9Y2W7 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC4.87□□□□□ -1.63
KCNIP3Q9Y2W7 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC4.87□□□□□ -1.63
KCNIP3Q9Y2W7 CCL15-204ENST00000617897 1073 ntAPPRIS P2 TSL 1 (best) BASIC4.87□□□□□ -1.63
KCNIP3Q9Y2W7 AC103564.3-201ENST00000621194 220 ntBASIC4.87□□□□□ -1.63
KCNIP3Q9Y2W7 ATM-229ENST00000639953 587 ntTSL 5 BASIC4.87□□□□□ -1.63
KCNIP3Q9Y2W7 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC4.87□□□□□ -1.63
KCNIP3Q9Y2W7 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
KCNIP3Q9Y2W7 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
KCNIP3Q9Y2W7 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
KCNIP3Q9Y2W7 AC021242.1-201ENST00000507315 2035 ntBASIC4.87□□□□□ -1.63
KCNIP3Q9Y2W7 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
KCNIP3Q9Y2W7 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC4.87□□□□□ -1.63
KCNIP3Q9Y2W7 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC4.87□□□□□ -1.63
KCNIP3Q9Y2W7 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
KCNIP3Q9Y2W7 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
KCNIP3Q9Y2W7 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC4.86□□□□□ -1.63
KCNIP3Q9Y2W7 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
KCNIP3Q9Y2W7 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
KCNIP3Q9Y2W7 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
KCNIP3Q9Y2W7 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
KCNIP3Q9Y2W7 AC112255.1-201ENST00000624070 2493 ntBASIC4.86□□□□□ -1.63
KCNIP3Q9Y2W7 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
KCNIP3Q9Y2W7 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
KCNIP3Q9Y2W7 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
KCNIP3Q9Y2W7 AC004817.4-201ENST00000602396 3625 ntBASIC4.86□□□□□ -1.63
KCNIP3Q9Y2W7 KRTAP19-6-201ENST00000334046 330 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
KCNIP3Q9Y2W7 AC012358.1-201ENST00000366153 916 ntTSL 3 BASIC4.86□□□□□ -1.63
KCNIP3Q9Y2W7 XAGE3-202ENST00000375491 489 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
KCNIP3Q9Y2W7 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
KCNIP3Q9Y2W7 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC4.86□□□□□ -1.63
KCNIP3Q9Y2W7 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
KCNIP3Q9Y2W7 SNORA7A-201ENST00000384765 139 ntBASIC4.86□□□□□ -1.63
KCNIP3Q9Y2W7 RN7SKP117-201ENST00000410175 264 ntBASIC4.86□□□□□ -1.63
KCNIP3Q9Y2W7 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC4.86□□□□□ -1.63
KCNIP3Q9Y2W7 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC4.86□□□□□ -1.63
KCNIP3Q9Y2W7 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC4.86□□□□□ -1.63
KCNIP3Q9Y2W7 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC4.86□□□□□ -1.63
KCNIP3Q9Y2W7 RPS10P14-201ENST00000440748 502 ntBASIC4.86□□□□□ -1.63
KCNIP3Q9Y2W7 GAPDHP37-201ENST00000442317 968 ntBASIC4.86□□□□□ -1.63
KCNIP3Q9Y2W7 MTCO3P17-201ENST00000443775 513 ntBASIC4.86□□□□□ -1.63
KCNIP3Q9Y2W7 AL356133.1-201ENST00000444762 372 ntBASIC4.86□□□□□ -1.63
KCNIP3Q9Y2W7 AC097359.1-201ENST00000447946 463 ntBASIC4.86□□□□□ -1.63
KCNIP3Q9Y2W7 CBX1P2-201ENST00000453841 458 ntBASIC4.86□□□□□ -1.63
KCNIP3Q9Y2W7 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC4.86□□□□□ -1.63
KCNIP3Q9Y2W7 AC016687.1-201ENST00000482574 353 ntBASIC4.86□□□□□ -1.63
KCNIP3Q9Y2W7 RPL34P33-201ENST00000486062 334 ntBASIC4.86□□□□□ -1.63
KCNIP3Q9Y2W7 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC4.86□□□□□ -1.63
KCNIP3Q9Y2W7 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC4.86□□□□□ -1.63
KCNIP3Q9Y2W7 LDHAP1-201ENST00000509421 992 ntBASIC4.86□□□□□ -1.63
KCNIP3Q9Y2W7 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC4.86□□□□□ -1.63
KCNIP3Q9Y2W7 AC093664.1-201ENST00000511779 289 ntBASIC4.86□□□□□ -1.63
KCNIP3Q9Y2W7 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC4.86□□□□□ -1.63
KCNIP3Q9Y2W7 ODF1-202ENST00000518835 368 ntTSL 3 BASIC4.86□□□□□ -1.63
KCNIP3Q9Y2W7 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC4.86□□□□□ -1.63
KCNIP3Q9Y2W7 AC021269.1-201ENST00000526860 705 ntBASIC4.86□□□□□ -1.63
KCNIP3Q9Y2W7 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC4.86□□□□□ -1.63
KCNIP3Q9Y2W7 AC130364.2-201ENST00000528639 604 ntBASIC4.86□□□□□ -1.63
KCNIP3Q9Y2W7 BICD1-206ENST00000551086 423 ntTSL 3 BASIC4.86□□□□□ -1.63
KCNIP3Q9Y2W7 LSM3P2-201ENST00000551246 273 ntBASIC4.86□□□□□ -1.63
KCNIP3Q9Y2W7 AC016383.1-201ENST00000582700 714 ntTSL 3 BASIC4.86□□□□□ -1.63
KCNIP3Q9Y2W7 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC4.86□□□□□ -1.63
KCNIP3Q9Y2W7 AC012254.3-201ENST00000591183 2117 ntBASIC4.86□□□□□ -1.63
KCNIP3Q9Y2W7 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC4.86□□□□□ -1.63
KCNIP3Q9Y2W7 VN1R81P-201ENST00000602085 372 ntBASIC4.86□□□□□ -1.63
KCNIP3Q9Y2W7 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
KCNIP3Q9Y2W7 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC4.86□□□□□ -1.63
KCNIP3Q9Y2W7 MIR6133-201ENST00000617057 108 ntBASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms