Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 AC008945.1-201ENST00000505144 499 ntBASIC6.72□□□□□ -1.33
HDAC6Q9UBN7 AC147055.1-201ENST00000509261 750 ntBASIC6.72□□□□□ -1.33
HDAC6Q9UBN7 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC6.72□□□□□ -1.33
HDAC6Q9UBN7 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
HDAC6Q9UBN7 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC6.72□□□□□ -1.33
HDAC6Q9UBN7 DPPA3P2-202ENST00000557188 1219 ntBASIC6.72□□□□□ -1.33
HDAC6Q9UBN7 AL356801.1-201ENST00000559320 294 ntBASIC6.72□□□□□ -1.33
HDAC6Q9UBN7 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC6.72□□□□□ -1.33
HDAC6Q9UBN7 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC6.72□□□□□ -1.33
HDAC6Q9UBN7 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC6.72□□□□□ -1.33
HDAC6Q9UBN7 AF117829.2-201ENST00000619538 361 ntBASIC6.72□□□□□ -1.33
HDAC6Q9UBN7 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC6.72□□□□□ -1.33
HDAC6Q9UBN7 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
HDAC6Q9UBN7 ING3-204ENST00000431467 1447 ntTSL 2 BASIC6.72□□□□□ -1.33
HDAC6Q9UBN7 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
HDAC6Q9UBN7 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
HDAC6Q9UBN7 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC6.72□□□□□ -1.33
HDAC6Q9UBN7 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC6.72□□□□□ -1.33
HDAC6Q9UBN7 OR13C1P-202ENST00000641378 2919 ntBASIC6.72□□□□□ -1.33
HDAC6Q9UBN7 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC6.72□□□□□ -1.33
HDAC6Q9UBN7 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC6.72□□□□□ -1.33
HDAC6Q9UBN7 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
HDAC6Q9UBN7 AC096921.2-201ENST00000561507 1916 ntBASIC6.72□□□□□ -1.33
HDAC6Q9UBN7 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC6.71□□□□□ -1.33
HDAC6Q9UBN7 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
HDAC6Q9UBN7 AC090220.1-201ENST00000593078 1699 ntBASIC6.71□□□□□ -1.33
HDAC6Q9UBN7 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
HDAC6Q9UBN7 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC6.71□□□□□ -1.33
HDAC6Q9UBN7 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
HDAC6Q9UBN7 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.34
HDAC6Q9UBN7 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
HDAC6Q9UBN7 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
HDAC6Q9UBN7 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
HDAC6Q9UBN7 SNRPEP6-201ENST00000407465 277 ntBASIC6.71□□□□□ -1.34
HDAC6Q9UBN7 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC6.71□□□□□ -1.34
HDAC6Q9UBN7 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC6.71□□□□□ -1.34
HDAC6Q9UBN7 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC6.71□□□□□ -1.34
HDAC6Q9UBN7 AC015977.1-201ENST00000418887 292 ntBASIC6.71□□□□□ -1.34
HDAC6Q9UBN7 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC6.71□□□□□ -1.34
HDAC6Q9UBN7 AC012497.1-201ENST00000429392 575 ntBASIC6.71□□□□□ -1.34
HDAC6Q9UBN7 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC6.71□□□□□ -1.34
HDAC6Q9UBN7 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC6.71□□□□□ -1.34
HDAC6Q9UBN7 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC6.71□□□□□ -1.34
HDAC6Q9UBN7 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC6.71□□□□□ -1.34
HDAC6Q9UBN7 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC6.71□□□□□ -1.34
HDAC6Q9UBN7 AL035690.1-201ENST00000490892 383 ntBASIC6.71□□□□□ -1.34
HDAC6Q9UBN7 RPS4XP14-201ENST00000493072 781 ntBASIC6.71□□□□□ -1.34
HDAC6Q9UBN7 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC6.71□□□□□ -1.34
HDAC6Q9UBN7 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC6.71□□□□□ -1.34
HDAC6Q9UBN7 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC6.71□□□□□ -1.34
HDAC6Q9UBN7 AC090022.1-201ENST00000546569 311 ntBASIC6.71□□□□□ -1.34
HDAC6Q9UBN7 MYL6-213ENST00000549017 502 ntTSL 3 BASIC6.71□□□□□ -1.34
HDAC6Q9UBN7 AC006530.1-201ENST00000555980 571 ntBASIC6.71□□□□□ -1.34
HDAC6Q9UBN7 HNRNPCP1-201ENST00000556181 766 ntBASIC6.71□□□□□ -1.34
HDAC6Q9UBN7 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC6.71□□□□□ -1.34
HDAC6Q9UBN7 NPM1P45-201ENST00000583151 559 ntBASIC6.71□□□□□ -1.34
HDAC6Q9UBN7 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
HDAC6Q9UBN7 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC6.71□□□□□ -1.34
HDAC6Q9UBN7 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
HDAC6Q9UBN7 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC6.71□□□□□ -1.34
HDAC6Q9UBN7 AC116667.2-201ENST00000641075 823 ntBASIC6.71□□□□□ -1.34
HDAC6Q9UBN7 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
HDAC6Q9UBN7 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
HDAC6Q9UBN7 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC6.71□□□□□ -1.34
HDAC6Q9UBN7 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
HDAC6Q9UBN7 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC6.71□□□□□ -1.34
HDAC6Q9UBN7 SELE-204ENST00000367776 3576 ntTSL 5 BASIC6.7□□□□□ -1.34
HDAC6Q9UBN7 SELE-205ENST00000367777 3576 ntTSL 5 BASIC6.7□□□□□ -1.34
HDAC6Q9UBN7 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC6.7□□□□□ -1.34
HDAC6Q9UBN7 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC6.7□□□□□ -1.34
HDAC6Q9UBN7 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
HDAC6Q9UBN7 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
HDAC6Q9UBN7 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC6.7□□□□□ -1.34
HDAC6Q9UBN7 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
HDAC6Q9UBN7 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
HDAC6Q9UBN7 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
HDAC6Q9UBN7 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC6.7□□□□□ -1.34
HDAC6Q9UBN7 RN7SKP186-201ENST00000365371 303 ntBASIC6.7□□□□□ -1.34
HDAC6Q9UBN7 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
HDAC6Q9UBN7 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC6.7□□□□□ -1.34
HDAC6Q9UBN7 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC6.7□□□□□ -1.34
HDAC6Q9UBN7 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
HDAC6Q9UBN7 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC6.7□□□□□ -1.34
HDAC6Q9UBN7 BMS1P10-201ENST00000443754 1120 ntBASIC6.7□□□□□ -1.34
HDAC6Q9UBN7 HCG14-201ENST00000444986 413 ntTSL 2 BASIC6.7□□□□□ -1.34
HDAC6Q9UBN7 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
HDAC6Q9UBN7 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC6.7□□□□□ -1.34
HDAC6Q9UBN7 AC007386.1-201ENST00000455212 582 ntBASIC6.7□□□□□ -1.34
HDAC6Q9UBN7 AC110749.1-201ENST00000462007 357 ntBASIC6.7□□□□□ -1.34
HDAC6Q9UBN7 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC6.7□□□□□ -1.34
HDAC6Q9UBN7 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC6.7□□□□□ -1.34
HDAC6Q9UBN7 AC093815.1-201ENST00000508637 280 ntBASIC6.7□□□□□ -1.34
HDAC6Q9UBN7 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
HDAC6Q9UBN7 SNORD116-30-201ENST00000516468 85 ntBASIC6.7□□□□□ -1.34
HDAC6Q9UBN7 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC6.7□□□□□ -1.34
HDAC6Q9UBN7 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC6.7□□□□□ -1.34
HDAC6Q9UBN7 OR56A7P-201ENST00000524865 941 ntBASIC6.7□□□□□ -1.34
HDAC6Q9UBN7 AC110056.1-201ENST00000525759 911 ntBASIC6.7□□□□□ -1.34
HDAC6Q9UBN7 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
HDAC6Q9UBN7 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC6.7□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 115.1 ms