Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 RNA5SP394-201ENST00000364216 119 ntBASIC5.5□□□□□ -1.53
CCDC88CQ9P219 DNAJA1P3-201ENST00000399417 1194 ntBASIC5.5□□□□□ -1.53
CCDC88CQ9P219 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC5.5□□□□□ -1.53
CCDC88CQ9P219 AK4P4-201ENST00000419465 646 ntBASIC5.5□□□□□ -1.53
CCDC88CQ9P219 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.5□□□□□ -1.53
CCDC88CQ9P219 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC5.5□□□□□ -1.53
CCDC88CQ9P219 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC5.5□□□□□ -1.53
CCDC88CQ9P219 AL731534.1-201ENST00000434711 269 ntBASIC5.5□□□□□ -1.53
CCDC88CQ9P219 TUBB4BP6-201ENST00000437576 479 ntBASIC5.5□□□□□ -1.53
CCDC88CQ9P219 AC006335.2-201ENST00000437993 330 ntBASIC5.5□□□□□ -1.53
CCDC88CQ9P219 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC5.5□□□□□ -1.53
CCDC88CQ9P219 AL390119.1-201ENST00000440329 312 ntBASIC5.5□□□□□ -1.53
CCDC88CQ9P219 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC5.5□□□□□ -1.53
CCDC88CQ9P219 RN7SL515P-201ENST00000463999 297 ntBASIC5.5□□□□□ -1.53
CCDC88CQ9P219 PDCL3P4-201ENST00000489621 720 ntBASIC5.5□□□□□ -1.53
CCDC88CQ9P219 AC021146.10-201ENST00000515628 706 ntBASIC5.5□□□□□ -1.53
CCDC88CQ9P219 SNORA43.3-201ENST00000517240 103 ntBASIC5.5□□□□□ -1.53
CCDC88CQ9P219 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC5.5□□□□□ -1.53
CCDC88CQ9P219 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC5.5□□□□□ -1.53
CCDC88CQ9P219 MYL6-213ENST00000549017 502 ntTSL 3 BASIC5.5□□□□□ -1.53
CCDC88CQ9P219 NPM1P42-201ENST00000560329 862 ntBASIC5.5□□□□□ -1.53
CCDC88CQ9P219 MIR4311-201ENST00000580794 100 ntBASIC5.5□□□□□ -1.53
CCDC88CQ9P219 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC5.5□□□□□ -1.53
CCDC88CQ9P219 AL352984.2-202ENST00000613699 155 ntBASIC5.5□□□□□ -1.53
CCDC88CQ9P219 AL357153.4-201ENST00000620487 1016 ntBASIC5.5□□□□□ -1.53
CCDC88CQ9P219 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CCDC88CQ9P219 CIR1P2-201ENST00000514821 1342 ntBASIC5.5□□□□□ -1.53
CCDC88CQ9P219 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CCDC88CQ9P219 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
CCDC88CQ9P219 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
CCDC88CQ9P219 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
CCDC88CQ9P219 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CCDC88CQ9P219 RNA5SP284-201ENST00000384547 118 ntBASIC5.49□□□□□ -1.53
CCDC88CQ9P219 RNA5SP178-201ENST00000410380 128 ntBASIC5.49□□□□□ -1.53
CCDC88CQ9P219 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC5.49□□□□□ -1.53
CCDC88CQ9P219 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC5.49□□□□□ -1.53
CCDC88CQ9P219 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC5.49□□□□□ -1.53
CCDC88CQ9P219 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC5.49□□□□□ -1.53
CCDC88CQ9P219 AL022331.1-201ENST00000429025 477 ntBASIC5.49□□□□□ -1.53
CCDC88CQ9P219 USP24P1-201ENST00000433802 779 ntBASIC5.49□□□□□ -1.53
CCDC88CQ9P219 AC242426.1-201ENST00000435270 960 ntBASIC5.49□□□□□ -1.53
CCDC88CQ9P219 SEPT14P12-201ENST00000442280 560 ntBASIC5.49□□□□□ -1.53
CCDC88CQ9P219 GAS5-218ENST00000448718 565 ntTSL 2 BASIC5.49□□□□□ -1.53
CCDC88CQ9P219 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CCDC88CQ9P219 SNORA70.20-201ENST00000516848 126 ntBASIC5.49□□□□□ -1.53
CCDC88CQ9P219 OR7E158P-201ENST00000524483 910 ntBASIC5.49□□□□□ -1.53
CCDC88CQ9P219 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC5.49□□□□□ -1.53
CCDC88CQ9P219 AC005244.1-201ENST00000582566 339 ntBASIC5.49□□□□□ -1.53
CCDC88CQ9P219 AP001267.4-201ENST00000602598 545 ntBASIC5.49□□□□□ -1.53
CCDC88CQ9P219 AL138960.1-201ENST00000613838 513 ntBASIC5.49□□□□□ -1.53
CCDC88CQ9P219 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CCDC88CQ9P219 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.49□□□□□ -1.53
CCDC88CQ9P219 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CCDC88CQ9P219 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
CCDC88CQ9P219 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.49□□□□□ -1.53
CCDC88CQ9P219 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
CCDC88CQ9P219 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC5.49□□□□□ -1.53
CCDC88CQ9P219 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CCDC88CQ9P219 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
CCDC88CQ9P219 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CCDC88CQ9P219 AC005005.4-201ENST00000623789 16698 ntBASIC5.49□□□□□ -1.53
CCDC88CQ9P219 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CCDC88CQ9P219 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC5.49□□□□□ -1.53
CCDC88CQ9P219 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.48□□□□□ -1.53
CCDC88CQ9P219 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.48□□□□□ -1.53
CCDC88CQ9P219 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CCDC88CQ9P219 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC5.48□□□□□ -1.53
CCDC88CQ9P219 BPHL-201ENST00000380368 797 ntTSL 5 BASIC5.48□□□□□ -1.53
CCDC88CQ9P219 SNORA16A-201ENST00000384342 137 ntBASIC5.48□□□□□ -1.53
CCDC88CQ9P219 OR3A2-201ENST00000408891 1076 ntBASIC5.48□□□□□ -1.53
CCDC88CQ9P219 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
CCDC88CQ9P219 Z68694.1-201ENST00000413929 841 ntBASIC5.48□□□□□ -1.53
CCDC88CQ9P219 BMS1P13-201ENST00000417301 885 ntBASIC5.48□□□□□ -1.53
CCDC88CQ9P219 AC021876.1-201ENST00000425959 359 ntBASIC5.48□□□□□ -1.53
CCDC88CQ9P219 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC5.48□□□□□ -1.53
CCDC88CQ9P219 AC073410.1-201ENST00000435125 589 ntBASIC5.48□□□□□ -1.53
CCDC88CQ9P219 AL512637.1-201ENST00000439523 1231 ntBASIC5.48□□□□□ -1.53
CCDC88CQ9P219 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC5.48□□□□□ -1.53
CCDC88CQ9P219 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
CCDC88CQ9P219 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC5.48□□□□□ -1.53
CCDC88CQ9P219 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CCDC88CQ9P219 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC5.48□□□□□ -1.53
CCDC88CQ9P219 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC5.48□□□□□ -1.53
CCDC88CQ9P219 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC5.48□□□□□ -1.53
CCDC88CQ9P219 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC5.48□□□□□ -1.53
CCDC88CQ9P219 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC5.48□□□□□ -1.53
CCDC88CQ9P219 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC5.48□□□□□ -1.53
CCDC88CQ9P219 GARSP1-201ENST00000570895 719 ntBASIC5.48□□□□□ -1.53
CCDC88CQ9P219 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC5.48□□□□□ -1.53
CCDC88CQ9P219 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC5.48□□□□□ -1.53
CCDC88CQ9P219 AL049840.6-201ENST00000604583 345 ntBASIC5.48□□□□□ -1.53
CCDC88CQ9P219 AC009237.12-201ENST00000604755 742 ntBASIC5.48□□□□□ -1.53
CCDC88CQ9P219 AC069234.4-201ENST00000621276 412 ntBASIC5.48□□□□□ -1.53
CCDC88CQ9P219 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC5.48□□□□□ -1.53
CCDC88CQ9P219 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC5.48□□□□□ -1.53
CCDC88CQ9P219 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CCDC88CQ9P219 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
CCDC88CQ9P219 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
CCDC88CQ9P219 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC5.48□□□□□ -1.53
CCDC88CQ9P219 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms