Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 AC092111.2-201ENST00000611627 1414 ntBASIC4.83□□□□□ -1.64
CCDC71LQ8N9Z2 RMST-209ENST00000639542 3269 ntTSL 5 BASIC4.83□□□□□ -1.64
CCDC71LQ8N9Z2 RPL11P4-201ENST00000332269 436 ntBASIC4.83□□□□□ -1.64
CCDC71LQ8N9Z2 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
CCDC71LQ8N9Z2 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
CCDC71LQ8N9Z2 SNRPEP6-201ENST00000407465 277 ntBASIC4.83□□□□□ -1.64
CCDC71LQ8N9Z2 NFU1P1-201ENST00000413128 774 ntBASIC4.83□□□□□ -1.64
CCDC71LQ8N9Z2 AC104823.1-201ENST00000413290 989 ntTSL 2 BASIC4.83□□□□□ -1.64
CCDC71LQ8N9Z2 AC079809.1-201ENST00000415468 276 ntBASIC4.83□□□□□ -1.64
CCDC71LQ8N9Z2 VN1R3-201ENST00000418822 919 ntBASIC4.83□□□□□ -1.64
CCDC71LQ8N9Z2 CLCN3P1-201ENST00000423965 1017 ntBASIC4.83□□□□□ -1.64
CCDC71LQ8N9Z2 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC4.83□□□□□ -1.64
CCDC71LQ8N9Z2 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC4.83□□□□□ -1.64
CCDC71LQ8N9Z2 AL136231.1-201ENST00000429407 730 ntBASIC4.83□□□□□ -1.64
CCDC71LQ8N9Z2 AC015983.1-201ENST00000441577 373 ntBASIC4.83□□□□□ -1.64
CCDC71LQ8N9Z2 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC4.83□□□□□ -1.64
CCDC71LQ8N9Z2 TRMT2B-AS1-201ENST00000443801 205 ntTSL 5 BASIC4.83□□□□□ -1.64
CCDC71LQ8N9Z2 RPS23P9-201ENST00000448848 438 ntBASIC4.83□□□□□ -1.64
CCDC71LQ8N9Z2 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC4.83□□□□□ -1.64
CCDC71LQ8N9Z2 AC002553.3-201ENST00000453002 341 ntBASIC4.83□□□□□ -1.64
CCDC71LQ8N9Z2 AL354872.1-201ENST00000456361 967 ntBASIC4.83□□□□□ -1.64
CCDC71LQ8N9Z2 SNORD125-201ENST00000459538 96 ntBASIC4.83□□□□□ -1.64
CCDC71LQ8N9Z2 PSAT1P4-201ENST00000466500 526 ntBASIC4.83□□□□□ -1.64
CCDC71LQ8N9Z2 RN7SL655P-201ENST00000486087 298 ntBASIC4.83□□□□□ -1.64
CCDC71LQ8N9Z2 AC105384.2-201ENST00000508433 640 ntBASIC4.83□□□□□ -1.64
CCDC71LQ8N9Z2 LDHAP1-201ENST00000509421 992 ntBASIC4.83□□□□□ -1.64
CCDC71LQ8N9Z2 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
CCDC71LQ8N9Z2 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC4.83□□□□□ -1.64
CCDC71LQ8N9Z2 AC015468.2-201ENST00000519605 550 ntTSL 3 BASIC4.83□□□□□ -1.64
CCDC71LQ8N9Z2 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC4.83□□□□□ -1.64
CCDC71LQ8N9Z2 AC083973.1-201ENST00000523459 590 ntTSL 2 BASIC4.83□□□□□ -1.64
CCDC71LQ8N9Z2 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CCDC71LQ8N9Z2 AC110056.1-201ENST00000525759 911 ntBASIC4.83□□□□□ -1.64
CCDC71LQ8N9Z2 PSMC1P8-201ENST00000536820 1296 ntBASIC4.83□□□□□ -1.64
CCDC71LQ8N9Z2 TDGP1-201ENST00000543961 1229 ntBASIC4.83□□□□□ -1.64
CCDC71LQ8N9Z2 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC4.83□□□□□ -1.64
CCDC71LQ8N9Z2 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC4.83□□□□□ -1.64
CCDC71LQ8N9Z2 AC234775.3-201ENST00000564612 656 ntBASIC4.83□□□□□ -1.64
CCDC71LQ8N9Z2 AC006120.1-201ENST00000579375 546 ntBASIC4.83□□□□□ -1.64
CCDC71LQ8N9Z2 MIR378H-201ENST00000579966 83 ntBASIC4.83□□□□□ -1.64
CCDC71LQ8N9Z2 MIR4732-201ENST00000581873 76 ntBASIC4.83□□□□□ -1.64
CCDC71LQ8N9Z2 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC4.83□□□□□ -1.64
CCDC71LQ8N9Z2 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC4.83□□□□□ -1.64
CCDC71LQ8N9Z2 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC4.83□□□□□ -1.64
CCDC71LQ8N9Z2 AP000654.1-201ENST00000602510 1192 ntTSL 5 BASIC4.83□□□□□ -1.64
CCDC71LQ8N9Z2 AL390877.1-201ENST00000605704 214 ntBASIC4.83□□□□□ -1.64
CCDC71LQ8N9Z2 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC4.83□□□□□ -1.64
CCDC71LQ8N9Z2 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC4.83□□□□□ -1.64
CCDC71LQ8N9Z2 AC073488.3-201ENST00000631611 778 ntBASIC4.83□□□□□ -1.64
CCDC71LQ8N9Z2 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CCDC71LQ8N9Z2 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
CCDC71LQ8N9Z2 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
CCDC71LQ8N9Z2 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC4.83□□□□□ -1.64
CCDC71LQ8N9Z2 AC093909.5-201ENST00000621839 1799 ntBASIC4.83□□□□□ -1.64
CCDC71LQ8N9Z2 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC4.83□□□□□ -1.64
CCDC71LQ8N9Z2 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
CCDC71LQ8N9Z2 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC4.83□□□□□ -1.64
CCDC71LQ8N9Z2 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
CCDC71LQ8N9Z2 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
CCDC71LQ8N9Z2 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CCDC71LQ8N9Z2 MTCO1P28-201ENST00000574177 1528 ntBASIC4.82□□□□□ -1.64
CCDC71LQ8N9Z2 AP001029.2-203ENST00000589795 4910 ntBASIC4.82□□□□□ -1.64
CCDC71LQ8N9Z2 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC4.82□□□□□ -1.64
CCDC71LQ8N9Z2 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
CCDC71LQ8N9Z2 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC4.82□□□□□ -1.64
CCDC71LQ8N9Z2 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC4.82□□□□□ -1.64
CCDC71LQ8N9Z2 EEF1A1P33-201ENST00000554413 1362 ntBASIC4.82□□□□□ -1.64
CCDC71LQ8N9Z2 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC4.82□□□□□ -1.64
CCDC71LQ8N9Z2 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CCDC71LQ8N9Z2 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
CCDC71LQ8N9Z2 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
CCDC71LQ8N9Z2 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
CCDC71LQ8N9Z2 S100A7-202ENST00000368723 479 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CCDC71LQ8N9Z2 AL139805.1-201ENST00000407837 289 ntBASIC4.82□□□□□ -1.64
CCDC71LQ8N9Z2 MIR1266-201ENST00000408125 84 ntBASIC4.82□□□□□ -1.64
CCDC71LQ8N9Z2 UBTFL2-201ENST00000411859 1191 ntBASIC4.82□□□□□ -1.64
CCDC71LQ8N9Z2 OR52N3P-201ENST00000413417 934 ntBASIC4.82□□□□□ -1.64
CCDC71LQ8N9Z2 AL691447.1-201ENST00000419456 387 ntBASIC4.82□□□□□ -1.64
CCDC71LQ8N9Z2 AC006509.1-201ENST00000420788 634 ntBASIC4.82□□□□□ -1.64
CCDC71LQ8N9Z2 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CCDC71LQ8N9Z2 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC4.82□□□□□ -1.64
CCDC71LQ8N9Z2 AL445928.1-201ENST00000435545 222 ntBASIC4.82□□□□□ -1.64
CCDC71LQ8N9Z2 AC007278.2-201ENST00000436582 1200 ntTSL 3 BASIC4.82□□□□□ -1.64
CCDC71LQ8N9Z2 AL359265.1-201ENST00000440296 795 ntBASIC4.82□□□□□ -1.64
CCDC71LQ8N9Z2 AC023141.8-201ENST00000442554 208 ntBASIC4.82□□□□□ -1.64
CCDC71LQ8N9Z2 RPS7P3-201ENST00000443360 580 ntBASIC4.82□□□□□ -1.64
CCDC71LQ8N9Z2 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC4.82□□□□□ -1.64
CCDC71LQ8N9Z2 AL929410.2-201ENST00000451170 189 ntBASIC4.82□□□□□ -1.64
CCDC71LQ8N9Z2 AL034369.1-201ENST00000453808 477 ntBASIC4.82□□□□□ -1.64
CCDC71LQ8N9Z2 CAMTA1-205ENST00000467404 546 ntTSL 3 BASIC4.82□□□□□ -1.64
CCDC71LQ8N9Z2 AC008629.2-201ENST00000503783 483 ntBASIC4.82□□□□□ -1.64
CCDC71LQ8N9Z2 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC4.82□□□□□ -1.64
CCDC71LQ8N9Z2 AC021146.10-201ENST00000515628 706 ntBASIC4.82□□□□□ -1.64
CCDC71LQ8N9Z2 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC4.82□□□□□ -1.64
CCDC71LQ8N9Z2 LRTOMT-217ENST00000539587 428 ntTSL 2 BASIC4.82□□□□□ -1.64
CCDC71LQ8N9Z2 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC4.82□□□□□ -1.64
CCDC71LQ8N9Z2 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC4.82□□□□□ -1.64
CCDC71LQ8N9Z2 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC4.82□□□□□ -1.64
CCDC71LQ8N9Z2 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC4.82□□□□□ -1.64
CCDC71LQ8N9Z2 MTND2P17-201ENST00000550281 688 ntBASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms