Protein–RNA interactions for Protein: Q6UXH8

CCBE1, Collagen and calcium-binding EGF domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 406 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1Q6UXH8 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CCBE1Q6UXH8 AC010132.4-201ENST00000569883 1368 ntBASIC5.42□□□□□ -1.54
CCBE1Q6UXH8 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.42□□□□□ -1.54
CCBE1Q6UXH8 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.42□□□□□ -1.54
CCBE1Q6UXH8 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.42□□□□□ -1.54
CCBE1Q6UXH8 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
CCBE1Q6UXH8 LZIC-203ENST00000400903 1405 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CCBE1Q6UXH8 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.42□□□□□ -1.54
CCBE1Q6UXH8 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CCBE1Q6UXH8 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.42□□□□□ -1.54
CCBE1Q6UXH8 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CCBE1Q6UXH8 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CCBE1Q6UXH8 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CCBE1Q6UXH8 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
CCBE1Q6UXH8 RNA5SP474-201ENST00000391234 90 ntBASIC5.42□□□□□ -1.54
CCBE1Q6UXH8 UBBP1-201ENST00000392399 473 ntBASIC5.42□□□□□ -1.54
CCBE1Q6UXH8 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.42□□□□□ -1.54
CCBE1Q6UXH8 RN7SKP38-201ENST00000410782 309 ntBASIC5.42□□□□□ -1.54
CCBE1Q6UXH8 RNA5SP155-201ENST00000411154 129 ntBASIC5.42□□□□□ -1.54
CCBE1Q6UXH8 AL691447.1-201ENST00000419456 387 ntBASIC5.42□□□□□ -1.54
CCBE1Q6UXH8 AL596268.1-201ENST00000427910 1048 ntBASIC5.42□□□□□ -1.54
CCBE1Q6UXH8 AL354893.1-201ENST00000433735 348 ntBASIC5.42□□□□□ -1.54
CCBE1Q6UXH8 AC003989.1-201ENST00000434569 565 ntBASIC5.42□□□□□ -1.54
CCBE1Q6UXH8 AC092601.1-201ENST00000444526 383 ntBASIC5.42□□□□□ -1.54
CCBE1Q6UXH8 OSBPL10-AS1-206ENST00000447181 575 ntTSL 4 BASIC5.42□□□□□ -1.54
CCBE1Q6UXH8 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC5.42□□□□□ -1.54
CCBE1Q6UXH8 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC5.42□□□□□ -1.54
CCBE1Q6UXH8 AC002456.2-201ENST00000509356 380 ntBASIC5.42□□□□□ -1.54
CCBE1Q6UXH8 TOMM22P4-201ENST00000511318 336 ntBASIC5.42□□□□□ -1.54
CCBE1Q6UXH8 RNA5SP318-201ENST00000516352 92 ntBASIC5.42□□□□□ -1.54
CCBE1Q6UXH8 RNA5SP400-201ENST00000517155 111 ntBASIC5.42□□□□□ -1.54
CCBE1Q6UXH8 TMEM97P2-201ENST00000517841 403 ntBASIC5.42□□□□□ -1.54
CCBE1Q6UXH8 TBCA-209ENST00000522370 435 ntTSL 3 BASIC5.42□□□□□ -1.54
CCBE1Q6UXH8 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC5.42□□□□□ -1.54
CCBE1Q6UXH8 AP004609.2-201ENST00000532177 190 ntBASIC5.42□□□□□ -1.54
CCBE1Q6UXH8 OR4A43P-201ENST00000532938 908 ntBASIC5.42□□□□□ -1.54
CCBE1Q6UXH8 AC020611.2-201ENST00000535594 671 ntTSL 3 BASIC5.42□□□□□ -1.54
CCBE1Q6UXH8 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC5.42□□□□□ -1.54
CCBE1Q6UXH8 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.42□□□□□ -1.54
CCBE1Q6UXH8 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC5.42□□□□□ -1.54
CCBE1Q6UXH8 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC5.42□□□□□ -1.54
CCBE1Q6UXH8 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.42□□□□□ -1.54
CCBE1Q6UXH8 AC023421.2-202ENST00000586213 547 ntTSL 3 BASIC5.42□□□□□ -1.54
CCBE1Q6UXH8 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.42□□□□□ -1.54
CCBE1Q6UXH8 AC011500.1-201ENST00000601963 469 ntBASIC5.42□□□□□ -1.54
CCBE1Q6UXH8 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC5.42□□□□□ -1.54
CCBE1Q6UXH8 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CCBE1Q6UXH8 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC5.42□□□□□ -1.54
CCBE1Q6UXH8 MIR6729-201ENST00000618194 65 ntBASIC5.42□□□□□ -1.54
CCBE1Q6UXH8 AC096708.4-201ENST00000620563 552 ntBASIC5.42□□□□□ -1.54
CCBE1Q6UXH8 VIPR1-AS1-221ENST00000626992 602 ntTSL 5 BASIC5.42□□□□□ -1.54
CCBE1Q6UXH8 CLUHP10-201ENST00000631979 980 ntBASIC5.42□□□□□ -1.54
CCBE1Q6UXH8 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.42□□□□□ -1.54
CCBE1Q6UXH8 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.42□□□□□ -1.54
CCBE1Q6UXH8 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CCBE1Q6UXH8 TCF12-213ENST00000559703 1544 ntTSL 5 BASIC5.42□□□□□ -1.54
CCBE1Q6UXH8 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC5.42□□□□□ -1.54
CCBE1Q6UXH8 AC009962.1-201ENST00000567327 3813 ntBASIC5.42□□□□□ -1.54
CCBE1Q6UXH8 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CCBE1Q6UXH8 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC5.42□□□□□ -1.54
CCBE1Q6UXH8 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC5.42□□□□□ -1.54
CCBE1Q6UXH8 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CCBE1Q6UXH8 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CCBE1Q6UXH8 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC5.41□□□□□ -1.54
CCBE1Q6UXH8 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CCBE1Q6UXH8 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.41□□□□□ -1.54
CCBE1Q6UXH8 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CCBE1Q6UXH8 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CCBE1Q6UXH8 AP001541.1-201ENST00000623322 1904 ntBASIC5.41□□□□□ -1.54
CCBE1Q6UXH8 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CCBE1Q6UXH8 OR13F1-201ENST00000334726 960 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
CCBE1Q6UXH8 RNU6-1331P-201ENST00000363658 106 ntBASIC5.41□□□□□ -1.54
CCBE1Q6UXH8 MIR433-201ENST00000384837 93 ntBASIC5.41□□□□□ -1.54
CCBE1Q6UXH8 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC5.41□□□□□ -1.54
CCBE1Q6UXH8 AC079809.1-201ENST00000415468 276 ntBASIC5.41□□□□□ -1.54
CCBE1Q6UXH8 METTL15P3-201ENST00000415522 1221 ntBASIC5.41□□□□□ -1.54
CCBE1Q6UXH8 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.41□□□□□ -1.54
CCBE1Q6UXH8 AC073136.2-201ENST00000417282 849 ntBASIC5.41□□□□□ -1.54
CCBE1Q6UXH8 AC079807.1-201ENST00000429993 481 ntBASIC5.41□□□□□ -1.54
CCBE1Q6UXH8 KCTD9P1-201ENST00000430462 1167 ntBASIC5.41□□□□□ -1.54
CCBE1Q6UXH8 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC5.41□□□□□ -1.54
CCBE1Q6UXH8 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC5.41□□□□□ -1.54
CCBE1Q6UXH8 ATP6V1G1P4-201ENST00000438388 335 ntBASIC5.41□□□□□ -1.54
CCBE1Q6UXH8 MTND6P18-201ENST00000439477 513 ntBASIC5.41□□□□□ -1.54
CCBE1Q6UXH8 RPSAP40-201ENST00000442343 891 ntBASIC5.41□□□□□ -1.54
CCBE1Q6UXH8 PFN1P11-201ENST00000445829 389 ntBASIC5.41□□□□□ -1.54
CCBE1Q6UXH8 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC5.41□□□□□ -1.54
CCBE1Q6UXH8 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC5.41□□□□□ -1.54
CCBE1Q6UXH8 CCNJP1-201ENST00000450600 1149 ntBASIC5.41□□□□□ -1.54
CCBE1Q6UXH8 AC144530.1-201ENST00000452862 555 ntBASIC5.41□□□□□ -1.54
CCBE1Q6UXH8 AC099670.1-201ENST00000455141 783 ntBASIC5.41□□□□□ -1.54
CCBE1Q6UXH8 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC5.41□□□□□ -1.54
CCBE1Q6UXH8 AC104339.1-201ENST00000465478 348 ntBASIC5.41□□□□□ -1.54
CCBE1Q6UXH8 AC114324.2-202ENST00000503812 134 ntBASIC5.41□□□□□ -1.54
CCBE1Q6UXH8 AC109588.1-201ENST00000507759 726 ntTSL 3 BASIC5.41□□□□□ -1.54
CCBE1Q6UXH8 AC010634.1-201ENST00000513925 540 ntTSL 3 BASIC5.41□□□□□ -1.54
CCBE1Q6UXH8 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC5.41□□□□□ -1.54
CCBE1Q6UXH8 PVT1-214ENST00000522875 922 ntTSL 5 BASIC5.41□□□□□ -1.54
CCBE1Q6UXH8 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC5.41□□□□□ -1.54
CCBE1Q6UXH8 SNRPCP6-201ENST00000528310 210 ntBASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms