Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC6.75□□□□□ -1.33
SHROOM1Q2M3G4 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC6.75□□□□□ -1.33
SHROOM1Q2M3G4 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
SHROOM1Q2M3G4 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC6.75□□□□□ -1.33
SHROOM1Q2M3G4 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
SHROOM1Q2M3G4 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
SHROOM1Q2M3G4 SNORA58B-201ENST00000364259 136 ntBASIC6.75□□□□□ -1.33
SHROOM1Q2M3G4 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
SHROOM1Q2M3G4 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC6.75□□□□□ -1.33
SHROOM1Q2M3G4 NENFP1-201ENST00000419476 466 ntBASIC6.75□□□□□ -1.33
SHROOM1Q2M3G4 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC6.75□□□□□ -1.33
SHROOM1Q2M3G4 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC6.75□□□□□ -1.33
SHROOM1Q2M3G4 AC015983.1-201ENST00000441577 373 ntBASIC6.75□□□□□ -1.33
SHROOM1Q2M3G4 AC019185.1-201ENST00000442718 389 ntBASIC6.75□□□□□ -1.33
SHROOM1Q2M3G4 CT45A11P-201ENST00000448043 1134 ntBASIC6.75□□□□□ -1.33
SHROOM1Q2M3G4 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC6.75□□□□□ -1.33
SHROOM1Q2M3G4 AC007386.1-201ENST00000455212 582 ntBASIC6.75□□□□□ -1.33
SHROOM1Q2M3G4 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC6.75□□□□□ -1.33
SHROOM1Q2M3G4 OARD1-211ENST00000480585 829 ntTSL 3 BASIC6.75□□□□□ -1.33
SHROOM1Q2M3G4 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC6.75□□□□□ -1.33
SHROOM1Q2M3G4 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC6.75□□□□□ -1.33
SHROOM1Q2M3G4 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC6.75□□□□□ -1.33
SHROOM1Q2M3G4 CYP4F27P-201ENST00000514557 494 ntBASIC6.75□□□□□ -1.33
SHROOM1Q2M3G4 RNA5SP34-201ENST00000516887 130 ntBASIC6.75□□□□□ -1.33
SHROOM1Q2M3G4 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC6.75□□□□□ -1.33
SHROOM1Q2M3G4 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC6.75□□□□□ -1.33
SHROOM1Q2M3G4 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC6.75□□□□□ -1.33
SHROOM1Q2M3G4 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC6.75□□□□□ -1.33
SHROOM1Q2M3G4 FKBP1AP1-201ENST00000594588 318 ntBASIC6.75□□□□□ -1.33
SHROOM1Q2M3G4 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
SHROOM1Q2M3G4 IMMP1LP3-201ENST00000604197 224 ntBASIC6.75□□□□□ -1.33
SHROOM1Q2M3G4 AC016769.4-201ENST00000616893 535 ntBASIC6.75□□□□□ -1.33
SHROOM1Q2M3G4 AP000432.2-201ENST00000624164 2048 ntBASIC6.75□□□□□ -1.33
SHROOM1Q2M3G4 CYP4Z2P-201ENST00000423332 1512 ntBASIC6.75□□□□□ -1.33
SHROOM1Q2M3G4 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC6.75□□□□□ -1.33
SHROOM1Q2M3G4 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
SHROOM1Q2M3G4 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
SHROOM1Q2M3G4 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
SHROOM1Q2M3G4 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC6.74□□□□□ -1.33
SHROOM1Q2M3G4 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC6.74□□□□□ -1.33
SHROOM1Q2M3G4 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
SHROOM1Q2M3G4 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC6.74□□□□□ -1.33
SHROOM1Q2M3G4 AC010401.2-201ENST00000575137 4934 ntBASIC6.74□□□□□ -1.33
SHROOM1Q2M3G4 AC093297.3-201ENST00000607056 2517 ntBASIC6.74□□□□□ -1.33
SHROOM1Q2M3G4 AL161756.3-201ENST00000641216 2071 ntBASIC6.74□□□□□ -1.33
SHROOM1Q2M3G4 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
SHROOM1Q2M3G4 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
SHROOM1Q2M3G4 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC6.74□□□□□ -1.33
SHROOM1Q2M3G4 NME1P1-201ENST00000420914 382 ntBASIC6.74□□□□□ -1.33
SHROOM1Q2M3G4 EIF4A1P7-201ENST00000421800 1220 ntBASIC6.74□□□□□ -1.33
SHROOM1Q2M3G4 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC6.74□□□□□ -1.33
SHROOM1Q2M3G4 HCG14-201ENST00000444986 413 ntTSL 2 BASIC6.74□□□□□ -1.33
SHROOM1Q2M3G4 RPS4XP1-201ENST00000482189 787 ntBASIC6.74□□□□□ -1.33
SHROOM1Q2M3G4 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC6.74□□□□□ -1.33
SHROOM1Q2M3G4 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC6.74□□□□□ -1.33
SHROOM1Q2M3G4 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC6.74□□□□□ -1.33
SHROOM1Q2M3G4 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC6.74□□□□□ -1.33
SHROOM1Q2M3G4 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
SHROOM1Q2M3G4 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC6.74□□□□□ -1.33
SHROOM1Q2M3G4 MFSD8-239ENST00000641590 2479 ntBASIC6.74□□□□□ -1.33
SHROOM1Q2M3G4 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC6.74□□□□□ -1.33
SHROOM1Q2M3G4 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
SHROOM1Q2M3G4 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
SHROOM1Q2M3G4 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC6.74□□□□□ -1.33
SHROOM1Q2M3G4 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC6.74□□□□□ -1.33
SHROOM1Q2M3G4 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC6.73□□□□□ -1.33
SHROOM1Q2M3G4 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
SHROOM1Q2M3G4 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
SHROOM1Q2M3G4 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
SHROOM1Q2M3G4 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC6.73□□□□□ -1.33
SHROOM1Q2M3G4 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
SHROOM1Q2M3G4 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
SHROOM1Q2M3G4 AL161912.4-201ENST00000623889 2468 ntBASIC6.73□□□□□ -1.33
SHROOM1Q2M3G4 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
SHROOM1Q2M3G4 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
SHROOM1Q2M3G4 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
SHROOM1Q2M3G4 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
SHROOM1Q2M3G4 RNA5SP30-201ENST00000365552 115 ntBASIC6.73□□□□□ -1.33
SHROOM1Q2M3G4 NIFKP3-201ENST00000417799 865 ntBASIC6.73□□□□□ -1.33
SHROOM1Q2M3G4 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC6.73□□□□□ -1.33
SHROOM1Q2M3G4 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC6.73□□□□□ -1.33
SHROOM1Q2M3G4 AC007394.1-201ENST00000421941 531 ntBASIC6.73□□□□□ -1.33
SHROOM1Q2M3G4 AL133173.1-201ENST00000423458 397 ntBASIC6.73□□□□□ -1.33
SHROOM1Q2M3G4 AC016027.5-201ENST00000427227 210 ntBASIC6.73□□□□□ -1.33
SHROOM1Q2M3G4 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC6.73□□□□□ -1.33
SHROOM1Q2M3G4 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC6.73□□□□□ -1.33
SHROOM1Q2M3G4 RN7SL727P-201ENST00000482164 296 ntBASIC6.73□□□□□ -1.33
SHROOM1Q2M3G4 RPS3AP15-201ENST00000483874 781 ntBASIC6.73□□□□□ -1.33
SHROOM1Q2M3G4 AC096754.1-201ENST00000508904 818 ntBASIC6.73□□□□□ -1.33
SHROOM1Q2M3G4 AC008429.4-201ENST00000521201 182 ntBASIC6.73□□□□□ -1.33
SHROOM1Q2M3G4 OR4A42P-201ENST00000531397 938 ntBASIC6.73□□□□□ -1.33
SHROOM1Q2M3G4 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC6.73□□□□□ -1.33
SHROOM1Q2M3G4 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC6.73□□□□□ -1.33
SHROOM1Q2M3G4 AL355974.3-201ENST00000617383 467 ntBASIC6.73□□□□□ -1.33
SHROOM1Q2M3G4 AC005840.5-201ENST00000619166 599 ntBASIC6.73□□□□□ -1.33
SHROOM1Q2M3G4 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC6.73□□□□□ -1.33
SHROOM1Q2M3G4 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
SHROOM1Q2M3G4 CPS1-IT1-201ENST00000628368 2306 ntBASIC6.73□□□□□ -1.33
SHROOM1Q2M3G4 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
SHROOM1Q2M3G4 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms