Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 ZNF264-201ENST00000263095 12163 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
PRKDCP78527 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC3.89□□□□□ -1.79
PRKDCP78527 SNORD46.1-201ENST00000364139 104 ntBASIC3.89□□□□□ -1.79
PRKDCP78527 MIR640-201ENST00000385086 96 ntBASIC3.89□□□□□ -1.79
PRKDCP78527 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
PRKDCP78527 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC3.89□□□□□ -1.79
PRKDCP78527 BZW1P1-201ENST00000454901 1240 ntBASIC3.89□□□□□ -1.79
PRKDCP78527 RPL7L1P3-201ENST00000455249 689 ntBASIC3.89□□□□□ -1.79
PRKDCP78527 snoU13.1-201ENST00000459157 104 ntBASIC3.89□□□□□ -1.79
PRKDCP78527 PRICKLE2-AS1-201ENST00000482609 6505 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
PRKDCP78527 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC3.89□□□□□ -1.79
PRKDCP78527 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
PRKDCP78527 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC3.89□□□□□ -1.79
PRKDCP78527 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC3.89□□□□□ -1.79
PRKDCP78527 VN1R85P-201ENST00000601587 426 ntBASIC3.89□□□□□ -1.79
PRKDCP78527 AC093765.1-201ENST00000603758 881 ntBASIC3.89□□□□□ -1.79
PRKDCP78527 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC3.89□□□□□ -1.79
PRKDCP78527 ATG2B-202ENST00000359933 13684 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
PRKDCP78527 MAN1A2-201ENST00000356554 8576 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
PRKDCP78527 ZC3H11B-202ENST00000636126 4432 ntAPPRIS ALT1 TSL 2 BASIC3.89□□□□□ -1.79
PRKDCP78527 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC3.89□□□□□ -1.79
PRKDCP78527 AC025569.1-202ENST00000548687 5903 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
PRKDCP78527 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
PRKDCP78527 PPIP5K1-203ENST00000360135 5559 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
PRKDCP78527 SHC4-202ENST00000396535 2799 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
PRKDCP78527 AC097063.1-201ENST00000426714 1797 ntBASIC3.89□□□□□ -1.79
PRKDCP78527 RNU1-64P-201ENST00000365443 163 ntBASIC3.89□□□□□ -1.79
PRKDCP78527 RPL31-204ENST00000409038 817 ntTSL 2 BASIC3.89□□□□□ -1.79
PRKDCP78527 RNA5SP487-201ENST00000410186 122 ntBASIC3.89□□□□□ -1.79
PRKDCP78527 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
PRKDCP78527 TXNP5-201ENST00000441043 315 ntBASIC3.89□□□□□ -1.79
PRKDCP78527 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC3.89□□□□□ -1.79
PRKDCP78527 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
PRKDCP78527 AC010618.1-201ENST00000469924 477 ntBASIC3.89□□□□□ -1.79
PRKDCP78527 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC3.89□□□□□ -1.79
PRKDCP78527 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC3.89□□□□□ -1.79
PRKDCP78527 AP005403.1-201ENST00000579720 229 ntBASIC3.89□□□□□ -1.79
PRKDCP78527 AC090607.5-201ENST00000615692 224 ntBASIC3.89□□□□□ -1.79
PRKDCP78527 AC006133.1-201ENST00000617106 264 ntBASIC3.89□□□□□ -1.79
PRKDCP78527 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC3.89□□□□□ -1.79
PRKDCP78527 AP002991.2-201ENST00000623807 2801 ntBASIC3.89□□□□□ -1.79
PRKDCP78527 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC3.88□□□□□ -1.79
PRKDCP78527 AP004607.3-201ENST00000530354 3915 ntBASIC3.88□□□□□ -1.79
PRKDCP78527 ZAN-206ENST00000618565 8651 ntAPPRIS P4 TSL 5 BASIC3.88□□□□□ -1.79
PRKDCP78527 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
PRKDCP78527 AC114876.1-201ENST00000490962 1366 ntBASIC3.88□□□□□ -1.79
PRKDCP78527 SLC30A8-201ENST00000427715 5430 ntTSL 2 BASIC3.88□□□□□ -1.79
PRKDCP78527 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC3.88□□□□□ -1.79
PRKDCP78527 MAST4-201ENST00000261569 7664 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
PRKDCP78527 LPIN1-207ENST00000425416 5582 ntTSL 2 BASIC3.88□□□□□ -1.79
PRKDCP78527 AC100858.3-201ENST00000533516 1605 ntTSL 5 BASIC3.88□□□□□ -1.79
PRKDCP78527 ZNF521-214ENST00000584787 4327 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
PRKDCP78527 DAB1-206ENST00000414851 5168 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
PRKDCP78527 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
PRKDCP78527 AC015977.1-201ENST00000418887 292 ntBASIC3.88□□□□□ -1.79
PRKDCP78527 RAD23BP1-201ENST00000421404 1227 ntBASIC3.88□□□□□ -1.79
PRKDCP78527 TMEM183AP1-205ENST00000432739 290 ntBASIC3.88□□□□□ -1.79
PRKDCP78527 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC3.88□□□□□ -1.79
PRKDCP78527 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC3.88□□□□□ -1.79
PRKDCP78527 OR52A4P-201ENST00000472867 958 ntBASIC3.88□□□□□ -1.79
PRKDCP78527 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC3.88□□□□□ -1.79
PRKDCP78527 TCL6_3.1-201ENST00000619064 137 ntBASIC3.88□□□□□ -1.79
PRKDCP78527 AC099494.2-201ENST00000623371 978 ntBASIC3.88□□□□□ -1.79
PRKDCP78527 ZNRD1ASP-221ENST00000637794 1074 ntBASIC3.88□□□□□ -1.79
PRKDCP78527 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
PRKDCP78527 AL353795.3-201ENST00000624351 5702 ntBASIC3.88□□□□□ -1.79
PRKDCP78527 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
PRKDCP78527 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC3.88□□□□□ -1.79
PRKDCP78527 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC3.88□□□□□ -1.79
PRKDCP78527 KARSP3-201ENST00000571212 1504 ntBASIC3.88□□□□□ -1.79
PRKDCP78527 DOCK11-201ENST00000276202 6625 ntAPPRIS P2 TSL 1 (best) BASIC3.88□□□□□ -1.79
PRKDCP78527 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC3.88□□□□□ -1.79
PRKDCP78527 KIAA0368-202ENST00000338205 7078 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
PRKDCP78527 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC3.88□□□□□ -1.79
PRKDCP78527 MBP-206ENST00000397863 4800 ntTSL 3 BASIC3.88□□□□□ -1.79
PRKDCP78527 AL137100.1-201ENST00000556703 1620 ntBASIC3.88□□□□□ -1.79
PRKDCP78527 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC3.88□□□□□ -1.79
PRKDCP78527 TNS3-201ENST00000311160 7618 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
PRKDCP78527 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC3.88□□□□□ -1.79
PRKDCP78527 ZNF776-201ENST00000317178 5292 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
PRKDCP78527 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC3.88□□□□□ -1.79
PRKDCP78527 AL731556.1-201ENST00000394628 3711 ntBASIC3.88□□□□□ -1.79
PRKDCP78527 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
PRKDCP78527 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
PRKDCP78527 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC3.88□□□□□ -1.79
PRKDCP78527 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC3.88□□□□□ -1.79
PRKDCP78527 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC3.88□□□□□ -1.79
PRKDCP78527 CASC6-201ENST00000437768 733 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
PRKDCP78527 GAPDHP25-201ENST00000447061 1001 ntBASIC3.88□□□□□ -1.79
PRKDCP78527 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC3.88□□□□□ -1.79
PRKDCP78527 MTCO1P1-201ENST00000624263 1081 ntBASIC3.88□□□□□ -1.79
PRKDCP78527 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC3.88□□□□□ -1.79
PRKDCP78527 OR4D9-202ENST00000641278 6063 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
PRKDCP78527 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
PRKDCP78527 PTBP3-205ENST00000374257 7240 ntAPPRIS ALT1 TSL 2 BASIC3.88□□□□□ -1.79
PRKDCP78527 TENM2-207ENST00000520394 8034 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
PRKDCP78527 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
PRKDCP78527 AC078842.2-201ENST00000447529 1835 ntTSL 2 BASIC3.88□□□□□ -1.79
PRKDCP78527 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
PRKDCP78527 AP001324.1-201ENST00000428553 399 ntBASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms