Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 MAPK10-350ENST00000641777 965 ntBASIC6.15□□□□□ -1.42
LHX1P48742 MFSD8-219ENST00000641228 2559 ntBASIC6.15□□□□□ -1.42
LHX1P48742 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
LHX1P48742 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
LHX1P48742 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC6.15□□□□□ -1.43
LHX1P48742 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
LHX1P48742 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.43
LHX1P48742 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.43
LHX1P48742 CPS1-IT1-201ENST00000628368 2306 ntBASIC6.15□□□□□ -1.43
LHX1P48742 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
LHX1P48742 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC6.15□□□□□ -1.43
LHX1P48742 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC6.15□□□□□ -1.43
LHX1P48742 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC6.15□□□□□ -1.43
LHX1P48742 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC6.15□□□□□ -1.43
LHX1P48742 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC6.14□□□□□ -1.43
LHX1P48742 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
LHX1P48742 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC6.14□□□□□ -1.43
LHX1P48742 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
LHX1P48742 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
LHX1P48742 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC6.14□□□□□ -1.43
LHX1P48742 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
LHX1P48742 AL159987.1-201ENST00000347911 293 ntBASIC6.14□□□□□ -1.43
LHX1P48742 RNA5SP46-201ENST00000362370 120 ntBASIC6.14□□□□□ -1.43
LHX1P48742 RNU1-59P-201ENST00000364829 162 ntBASIC6.14□□□□□ -1.43
LHX1P48742 HIST1H3PS1-201ENST00000404612 417 ntBASIC6.14□□□□□ -1.43
LHX1P48742 OR2W4P-201ENST00000406496 926 ntBASIC6.14□□□□□ -1.43
LHX1P48742 RN7SKP286-201ENST00000410894 299 ntBASIC6.14□□□□□ -1.43
LHX1P48742 RN7SKP293-201ENST00000411389 296 ntBASIC6.14□□□□□ -1.43
LHX1P48742 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC6.14□□□□□ -1.43
LHX1P48742 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC6.14□□□□□ -1.43
LHX1P48742 RPS3AP38-201ENST00000435889 763 ntBASIC6.14□□□□□ -1.43
LHX1P48742 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC6.14□□□□□ -1.43
LHX1P48742 SUMO2P3-201ENST00000438311 288 ntBASIC6.14□□□□□ -1.43
LHX1P48742 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC6.14□□□□□ -1.43
LHX1P48742 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
LHX1P48742 AL451063.1-201ENST00000450164 1133 ntBASIC6.14□□□□□ -1.43
LHX1P48742 AC004129.2-201ENST00000457229 287 ntBASIC6.14□□□□□ -1.43
LHX1P48742 RPL32P33-201ENST00000487023 394 ntBASIC6.14□□□□□ -1.43
LHX1P48742 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC6.14□□□□□ -1.43
LHX1P48742 AP000926.3-201ENST00000497201 299 ntBASIC6.14□□□□□ -1.43
LHX1P48742 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC6.14□□□□□ -1.43
LHX1P48742 AC105384.2-201ENST00000508433 640 ntBASIC6.14□□□□□ -1.43
LHX1P48742 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC6.14□□□□□ -1.43
LHX1P48742 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC6.14□□□□□ -1.43
LHX1P48742 MYL6-213ENST00000549017 502 ntTSL 3 BASIC6.14□□□□□ -1.43
LHX1P48742 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC6.14□□□□□ -1.43
LHX1P48742 DPPA2P4-201ENST00000563717 878 ntBASIC6.14□□□□□ -1.43
LHX1P48742 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC6.14□□□□□ -1.43
LHX1P48742 RNA5SP440-201ENST00000612665 119 ntBASIC6.14□□□□□ -1.43
LHX1P48742 RN7SL787P-201ENST00000613000 284 ntBASIC6.14□□□□□ -1.43
LHX1P48742 U1.25-201ENST00000614085 162 ntBASIC6.14□□□□□ -1.43
LHX1P48742 U1.34-201ENST00000618578 162 ntBASIC6.14□□□□□ -1.43
LHX1P48742 U1.31-201ENST00000620022 160 ntBASIC6.14□□□□□ -1.43
LHX1P48742 AC002044.3-201ENST00000623314 541 ntBASIC6.14□□□□□ -1.43
LHX1P48742 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC6.14□□□□□ -1.43
LHX1P48742 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
LHX1P48742 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC6.14□□□□□ -1.43
LHX1P48742 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC6.14□□□□□ -1.43
LHX1P48742 AC233968.1-201ENST00000611212 1300 ntBASIC6.14□□□□□ -1.43
LHX1P48742 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
LHX1P48742 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC6.14□□□□□ -1.43
LHX1P48742 IMMTP1-201ENST00000435590 2219 ntBASIC6.14□□□□□ -1.43
LHX1P48742 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
LHX1P48742 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC6.14□□□□□ -1.43
LHX1P48742 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
LHX1P48742 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC6.14□□□□□ -1.43
LHX1P48742 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC6.14□□□□□ -1.43
LHX1P48742 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC6.14□□□□□ -1.43
LHX1P48742 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC6.13□□□□□ -1.43
LHX1P48742 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
LHX1P48742 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC6.13□□□□□ -1.43
LHX1P48742 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC6.13□□□□□ -1.43
LHX1P48742 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC6.13□□□□□ -1.43
LHX1P48742 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
LHX1P48742 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
LHX1P48742 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
LHX1P48742 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
LHX1P48742 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
LHX1P48742 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
LHX1P48742 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC6.13□□□□□ -1.43
LHX1P48742 MIR323A-201ENST00000362199 86 ntBASIC6.13□□□□□ -1.43
LHX1P48742 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC6.13□□□□□ -1.43
LHX1P48742 AL512422.1-201ENST00000407033 553 ntBASIC6.13□□□□□ -1.43
LHX1P48742 RN7SKP206-201ENST00000410823 293 ntBASIC6.13□□□□□ -1.43
LHX1P48742 BMS1P17-202ENST00000416720 316 ntBASIC6.13□□□□□ -1.43
LHX1P48742 NIFKP3-201ENST00000417799 865 ntBASIC6.13□□□□□ -1.43
LHX1P48742 VN1R21P-201ENST00000426703 765 ntBASIC6.13□□□□□ -1.43
LHX1P48742 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC6.13□□□□□ -1.43
LHX1P48742 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC6.13□□□□□ -1.43
LHX1P48742 Z84478.1-201ENST00000438230 1219 ntBASIC6.13□□□□□ -1.43
LHX1P48742 AC002504.1-201ENST00000438281 691 ntBASIC6.13□□□□□ -1.43
LHX1P48742 AL391987.1-201ENST00000441025 200 ntBASIC6.13□□□□□ -1.43
LHX1P48742 OR7E116P-201ENST00000448529 957 ntBASIC6.13□□□□□ -1.43
LHX1P48742 YWHAEP1-201ENST00000453697 763 ntBASIC6.13□□□□□ -1.43
LHX1P48742 RPS3AP15-201ENST00000483874 781 ntBASIC6.13□□□□□ -1.43
LHX1P48742 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC6.13□□□□□ -1.43
LHX1P48742 AC109481.1-201ENST00000509173 282 ntBASIC6.13□□□□□ -1.43
LHX1P48742 SSX6-203ENST00000509958 336 ntTSL 3 BASIC6.13□□□□□ -1.43
LHX1P48742 SNORA43.3-201ENST00000517240 103 ntBASIC6.13□□□□□ -1.43
LHX1P48742 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 154.5 ms