Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 NIFKP3-201ENST00000417799 865 ntBASIC6.14□□□□□ -1.43
BRCC3P46736 AC019205.1-201ENST00000421830 730 ntBASIC6.14□□□□□ -1.43
BRCC3P46736 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC6.14□□□□□ -1.43
BRCC3P46736 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC6.14□□□□□ -1.43
BRCC3P46736 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
BRCC3P46736 AL390119.1-201ENST00000440329 312 ntBASIC6.14□□□□□ -1.43
BRCC3P46736 AC006539.1-201ENST00000481419 501 ntBASIC6.14□□□□□ -1.43
BRCC3P46736 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC6.14□□□□□ -1.43
BRCC3P46736 AC073610.1-201ENST00000489971 396 ntBASIC6.14□□□□□ -1.43
BRCC3P46736 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
BRCC3P46736 KATNBL1P4-201ENST00000503545 918 ntBASIC6.14□□□□□ -1.43
BRCC3P46736 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC6.14□□□□□ -1.43
BRCC3P46736 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC6.14□□□□□ -1.43
BRCC3P46736 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC6.14□□□□□ -1.43
BRCC3P46736 AP003080.1-202ENST00000526526 915 ntBASIC6.14□□□□□ -1.43
BRCC3P46736 AC090022.1-201ENST00000546569 311 ntBASIC6.14□□□□□ -1.43
BRCC3P46736 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC6.14□□□□□ -1.43
BRCC3P46736 DPPA3P2-202ENST00000557188 1219 ntBASIC6.14□□□□□ -1.43
BRCC3P46736 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC6.14□□□□□ -1.43
BRCC3P46736 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC6.14□□□□□ -1.43
BRCC3P46736 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC6.14□□□□□ -1.43
BRCC3P46736 AC005899.7-201ENST00000618199 588 ntBASIC6.14□□□□□ -1.43
BRCC3P46736 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
BRCC3P46736 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC6.14□□□□□ -1.43
BRCC3P46736 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC6.14□□□□□ -1.43
BRCC3P46736 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
BRCC3P46736 AC114876.1-201ENST00000490962 1366 ntBASIC6.14□□□□□ -1.43
BRCC3P46736 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
BRCC3P46736 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
BRCC3P46736 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC6.14□□□□□ -1.43
BRCC3P46736 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
BRCC3P46736 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
BRCC3P46736 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
BRCC3P46736 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC6.14□□□□□ -1.43
BRCC3P46736 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
BRCC3P46736 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC6.14□□□□□ -1.43
BRCC3P46736 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC6.13□□□□□ -1.43
BRCC3P46736 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC6.13□□□□□ -1.43
BRCC3P46736 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
BRCC3P46736 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
BRCC3P46736 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
BRCC3P46736 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC6.13□□□□□ -1.43
BRCC3P46736 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC6.13□□□□□ -1.43
BRCC3P46736 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC6.13□□□□□ -1.43
BRCC3P46736 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
BRCC3P46736 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
BRCC3P46736 RN7SKP160-201ENST00000363804 340 ntBASIC6.13□□□□□ -1.43
BRCC3P46736 RN7SKP124-201ENST00000364730 341 ntBASIC6.13□□□□□ -1.43
BRCC3P46736 RNA5SP131-201ENST00000365452 119 ntBASIC6.13□□□□□ -1.43
BRCC3P46736 AL121835.1-201ENST00000404250 354 ntBASIC6.13□□□□□ -1.43
BRCC3P46736 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC6.13□□□□□ -1.43
BRCC3P46736 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC6.13□□□□□ -1.43
BRCC3P46736 BX510359.3-201ENST00000422168 306 ntBASIC6.13□□□□□ -1.43
BRCC3P46736 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC6.13□□□□□ -1.43
BRCC3P46736 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC6.13□□□□□ -1.43
BRCC3P46736 LDHAP2-201ENST00000437325 985 ntBASIC6.13□□□□□ -1.43
BRCC3P46736 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC6.13□□□□□ -1.43
BRCC3P46736 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC6.13□□□□□ -1.43
BRCC3P46736 SLC25A51P1-201ENST00000468432 871 ntBASIC6.13□□□□□ -1.43
BRCC3P46736 RPS4XP14-201ENST00000493072 781 ntBASIC6.13□□□□□ -1.43
BRCC3P46736 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC6.13□□□□□ -1.43
BRCC3P46736 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC6.13□□□□□ -1.43
BRCC3P46736 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC6.13□□□□□ -1.43
BRCC3P46736 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC6.13□□□□□ -1.43
BRCC3P46736 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC6.13□□□□□ -1.43
BRCC3P46736 HSPE1P2-201ENST00000554777 306 ntBASIC6.13□□□□□ -1.43
BRCC3P46736 AC007225.2-201ENST00000562529 256 ntBASIC6.13□□□□□ -1.43
BRCC3P46736 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC6.13□□□□□ -1.43
BRCC3P46736 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
BRCC3P46736 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC6.13□□□□□ -1.43
BRCC3P46736 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC6.13□□□□□ -1.43
BRCC3P46736 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC6.13□□□□□ -1.43
BRCC3P46736 NR1H5P-201ENST00000452683 1377 ntBASIC6.13□□□□□ -1.43
BRCC3P46736 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC6.13□□□□□ -1.43
BRCC3P46736 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
BRCC3P46736 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
BRCC3P46736 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
BRCC3P46736 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC6.13□□□□□ -1.43
BRCC3P46736 AC005224.3-201ENST00000584683 2140 ntBASIC6.13□□□□□ -1.43
BRCC3P46736 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
BRCC3P46736 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
BRCC3P46736 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
BRCC3P46736 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
BRCC3P46736 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
BRCC3P46736 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
BRCC3P46736 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
BRCC3P46736 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
BRCC3P46736 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC6.12□□□□□ -1.43
BRCC3P46736 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
BRCC3P46736 HSPD1P8-201ENST00000400121 1658 ntBASIC6.12□□□□□ -1.43
BRCC3P46736 RPL7P58-201ENST00000402913 758 ntBASIC6.12□□□□□ -1.43
BRCC3P46736 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC6.12□□□□□ -1.43
BRCC3P46736 AC113412.1-201ENST00000425840 504 ntBASIC6.12□□□□□ -1.43
BRCC3P46736 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC6.12□□□□□ -1.43
BRCC3P46736 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
BRCC3P46736 OR7E116P-201ENST00000448529 957 ntBASIC6.12□□□□□ -1.43
BRCC3P46736 NPM1P19-201ENST00000450070 712 ntBASIC6.12□□□□□ -1.43
BRCC3P46736 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC6.12□□□□□ -1.43
BRCC3P46736 AC117409.1-201ENST00000470499 1310 ntBASIC6.12□□□□□ -1.43
BRCC3P46736 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms