Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC6.15□□□□□ -1.42
CHRNA3P32297 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC6.15□□□□□ -1.42
CHRNA3P32297 OTX2-203ENST00000554559 715 ntTSL 5 BASIC6.15□□□□□ -1.42
CHRNA3P32297 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC6.15□□□□□ -1.42
CHRNA3P32297 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC6.15□□□□□ -1.42
CHRNA3P32297 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC6.15□□□□□ -1.42
CHRNA3P32297 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC6.15□□□□□ -1.42
CHRNA3P32297 AC015712.7-201ENST00000615211 635 ntBASIC6.15□□□□□ -1.42
CHRNA3P32297 AC005618.4-201ENST00000625053 554 ntBASIC6.15□□□□□ -1.42
CHRNA3P32297 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC6.15□□□□□ -1.42
CHRNA3P32297 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC6.15□□□□□ -1.42
CHRNA3P32297 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.43
CHRNA3P32297 NLRP3P1-201ENST00000622303 1785 ntBASIC6.15□□□□□ -1.43
CHRNA3P32297 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC6.15□□□□□ -1.43
CHRNA3P32297 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC6.15□□□□□ -1.43
CHRNA3P32297 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC6.15□□□□□ -1.43
CHRNA3P32297 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.43
CHRNA3P32297 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
CHRNA3P32297 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CHRNA3P32297 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CHRNA3P32297 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC6.14□□□□□ -1.43
CHRNA3P32297 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CHRNA3P32297 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CHRNA3P32297 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC6.14□□□□□ -1.43
CHRNA3P32297 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC6.14□□□□□ -1.43
CHRNA3P32297 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CHRNA3P32297 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CHRNA3P32297 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
CHRNA3P32297 RNA5SP477-201ENST00000362639 119 ntBASIC6.14□□□□□ -1.43
CHRNA3P32297 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
CHRNA3P32297 HMGN1P20-201ENST00000411849 300 ntBASIC6.14□□□□□ -1.43
CHRNA3P32297 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC6.14□□□□□ -1.43
CHRNA3P32297 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC6.14□□□□□ -1.43
CHRNA3P32297 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CHRNA3P32297 TEX41-206ENST00000432608 661 ntTSL 3 BASIC6.14□□□□□ -1.43
CHRNA3P32297 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC6.14□□□□□ -1.43
CHRNA3P32297 AC242426.1-201ENST00000435270 960 ntBASIC6.14□□□□□ -1.43
CHRNA3P32297 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC6.14□□□□□ -1.43
CHRNA3P32297 AL358876.1-201ENST00000453364 1075 ntBASIC6.14□□□□□ -1.43
CHRNA3P32297 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC6.14□□□□□ -1.43
CHRNA3P32297 OR7E157P-201ENST00000494376 911 ntBASIC6.14□□□□□ -1.43
CHRNA3P32297 AC006499.4-201ENST00000510947 694 ntBASIC6.14□□□□□ -1.43
CHRNA3P32297 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC6.14□□□□□ -1.43
CHRNA3P32297 MIR2117-201ENST00000516780 80 ntBASIC6.14□□□□□ -1.43
CHRNA3P32297 AC060775.1-201ENST00000518241 520 ntBASIC6.14□□□□□ -1.43
CHRNA3P32297 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC6.14□□□□□ -1.43
CHRNA3P32297 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
CHRNA3P32297 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC6.14□□□□□ -1.43
CHRNA3P32297 AC084824.2-201ENST00000548906 345 ntBASIC6.14□□□□□ -1.43
CHRNA3P32297 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC6.14□□□□□ -1.43
CHRNA3P32297 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC6.14□□□□□ -1.43
CHRNA3P32297 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC6.14□□□□□ -1.43
CHRNA3P32297 AC005244.1-201ENST00000582566 339 ntBASIC6.14□□□□□ -1.43
CHRNA3P32297 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC6.14□□□□□ -1.43
CHRNA3P32297 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC6.14□□□□□ -1.43
CHRNA3P32297 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC6.14□□□□□ -1.43
CHRNA3P32297 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC6.14□□□□□ -1.43
CHRNA3P32297 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC6.14□□□□□ -1.43
CHRNA3P32297 AL136228.1-201ENST00000622221 319 ntBASIC6.14□□□□□ -1.43
CHRNA3P32297 AL357562.1-201ENST00000624911 609 ntBASIC6.14□□□□□ -1.43
CHRNA3P32297 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC6.14□□□□□ -1.43
CHRNA3P32297 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CHRNA3P32297 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
CHRNA3P32297 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC6.14□□□□□ -1.43
CHRNA3P32297 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CHRNA3P32297 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
CHRNA3P32297 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
CHRNA3P32297 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CHRNA3P32297 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CHRNA3P32297 AC023490.2-201ENST00000359859 470 ntBASIC6.13□□□□□ -1.43
CHRNA3P32297 RNA5SP273-201ENST00000362484 113 ntBASIC6.13□□□□□ -1.43
CHRNA3P32297 GAS5-202ENST00000414075 413 ntTSL 2 BASIC6.13□□□□□ -1.43
CHRNA3P32297 IPPKP1-201ENST00000422501 768 ntBASIC6.13□□□□□ -1.43
CHRNA3P32297 NPM1P48-201ENST00000436002 853 ntBASIC6.13□□□□□ -1.43
CHRNA3P32297 HLA-DPA3-207ENST00000454398 229 ntBASIC6.13□□□□□ -1.43
CHRNA3P32297 AC108751.3-201ENST00000461814 1020 ntBASIC6.13□□□□□ -1.43
CHRNA3P32297 GOLGA5P1-201ENST00000507317 980 ntBASIC6.13□□□□□ -1.43
CHRNA3P32297 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
CHRNA3P32297 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC6.13□□□□□ -1.43
CHRNA3P32297 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC6.13□□□□□ -1.43
CHRNA3P32297 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC6.13□□□□□ -1.43
CHRNA3P32297 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC6.13□□□□□ -1.43
CHRNA3P32297 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC6.13□□□□□ -1.43
CHRNA3P32297 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC6.13□□□□□ -1.43
CHRNA3P32297 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CHRNA3P32297 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC6.13□□□□□ -1.43
CHRNA3P32297 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC6.13□□□□□ -1.43
CHRNA3P32297 AC129915.3-201ENST00000634128 948 ntBASIC6.13□□□□□ -1.43
CHRNA3P32297 AL391117.1-201ENST00000640003 1186 ntTSL 5 BASIC6.13□□□□□ -1.43
CHRNA3P32297 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC6.13□□□□□ -1.43
CHRNA3P32297 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CHRNA3P32297 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC6.13□□□□□ -1.43
CHRNA3P32297 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CHRNA3P32297 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CHRNA3P32297 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CHRNA3P32297 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CHRNA3P32297 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CHRNA3P32297 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC6.13□□□□□ -1.43
CHRNA3P32297 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
CHRNA3P32297 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms