Protein–RNA interactions for Protein: P23560

BDNF, Brain-derived neurotrophic factor, humanhuman

Predictions only

Length 247 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BDNFP23560 AC119674.1-213ENST00000641177 1386 ntBASIC6.48□□□□□ -1.37
BDNFP23560 AC010329.1-201ENST00000593903 8328 ntBASIC6.48□□□□□ -1.37
BDNFP23560 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC6.48□□□□□ -1.37
BDNFP23560 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
BDNFP23560 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
BDNFP23560 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
BDNFP23560 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
BDNFP23560 AL096829.1-201ENST00000413677 457 ntBASIC6.48□□□□□ -1.37
BDNFP23560 RNF19BPX-201ENST00000426224 625 ntBASIC6.48□□□□□ -1.37
BDNFP23560 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
BDNFP23560 AC093716.1-201ENST00000435923 377 ntBASIC6.48□□□□□ -1.37
BDNFP23560 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC6.48□□□□□ -1.37
BDNFP23560 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC6.48□□□□□ -1.37
BDNFP23560 FTLP8-201ENST00000446770 267 ntBASIC6.48□□□□□ -1.37
BDNFP23560 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
BDNFP23560 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC6.48□□□□□ -1.37
BDNFP23560 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC6.48□□□□□ -1.37
BDNFP23560 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
BDNFP23560 IGHV3-63-201ENST00000518422 341 ntBASIC6.48□□□□□ -1.37
BDNFP23560 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC6.48□□□□□ -1.37
BDNFP23560 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC6.48□□□□□ -1.37
BDNFP23560 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC6.48□□□□□ -1.37
BDNFP23560 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC6.48□□□□□ -1.37
BDNFP23560 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC6.48□□□□□ -1.37
BDNFP23560 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC6.48□□□□□ -1.37
BDNFP23560 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC6.48□□□□□ -1.37
BDNFP23560 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC6.48□□□□□ -1.37
BDNFP23560 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC6.48□□□□□ -1.37
BDNFP23560 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC6.48□□□□□ -1.37
BDNFP23560 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC6.48□□□□□ -1.37
BDNFP23560 AC011497.2-201ENST00000600255 639 ntBASIC6.48□□□□□ -1.37
BDNFP23560 AC067773.1-201ENST00000603284 1094 ntBASIC6.48□□□□□ -1.37
BDNFP23560 AC034236.3-201ENST00000605999 461 ntBASIC6.48□□□□□ -1.37
BDNFP23560 AC141002.1-201ENST00000607025 279 ntBASIC6.48□□□□□ -1.37
BDNFP23560 AL021368.3-201ENST00000607119 578 ntBASIC6.48□□□□□ -1.37
BDNFP23560 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
BDNFP23560 AC024884.1-201ENST00000620583 399 ntBASIC6.48□□□□□ -1.37
BDNFP23560 AC021422.1-201ENST00000621212 473 ntBASIC6.48□□□□□ -1.37
BDNFP23560 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC6.48□□□□□ -1.37
BDNFP23560 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC6.48□□□□□ -1.37
BDNFP23560 AC119674.1-220ENST00000641502 1048 ntBASIC6.48□□□□□ -1.37
BDNFP23560 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
BDNFP23560 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
BDNFP23560 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
BDNFP23560 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC6.48□□□□□ -1.37
BDNFP23560 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
BDNFP23560 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC6.48□□□□□ -1.37
BDNFP23560 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
BDNFP23560 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
BDNFP23560 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
BDNFP23560 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC6.47□□□□□ -1.37
BDNFP23560 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
BDNFP23560 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
BDNFP23560 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC6.47□□□□□ -1.37
BDNFP23560 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC6.47□□□□□ -1.37
BDNFP23560 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
BDNFP23560 HSPA8P17-201ENST00000427029 1382 ntBASIC6.47□□□□□ -1.37
BDNFP23560 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
BDNFP23560 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC6.47□□□□□ -1.37
BDNFP23560 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC6.47□□□□□ -1.37
BDNFP23560 BRAFP1-201ENST00000445336 2703 ntBASIC6.47□□□□□ -1.37
BDNFP23560 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC6.47□□□□□ -1.37
BDNFP23560 OR2W4P-201ENST00000406496 926 ntBASIC6.47□□□□□ -1.37
BDNFP23560 HSD17B7P1-201ENST00000412419 1017 ntBASIC6.47□□□□□ -1.37
BDNFP23560 AC245096.1-201ENST00000413104 546 ntBASIC6.47□□□□□ -1.37
BDNFP23560 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC6.47□□□□□ -1.37
BDNFP23560 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
BDNFP23560 MTCO1P57-201ENST00000432182 261 ntBASIC6.47□□□□□ -1.37
BDNFP23560 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
BDNFP23560 AL022237.1-201ENST00000446663 358 ntBASIC6.47□□□□□ -1.37
BDNFP23560 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC6.47□□□□□ -1.37
BDNFP23560 CALM1P2-201ENST00000452941 448 ntBASIC6.47□□□□□ -1.37
BDNFP23560 AC103563.5-201ENST00000455643 364 ntBASIC6.47□□□□□ -1.37
BDNFP23560 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
BDNFP23560 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC6.47□□□□□ -1.37
BDNFP23560 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC6.47□□□□□ -1.37
BDNFP23560 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC6.47□□□□□ -1.37
BDNFP23560 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC6.47□□□□□ -1.37
BDNFP23560 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC6.47□□□□□ -1.37
BDNFP23560 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC6.47□□□□□ -1.37
BDNFP23560 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC6.47□□□□□ -1.37
BDNFP23560 AC078878.1-201ENST00000539832 958 ntBASIC6.47□□□□□ -1.37
BDNFP23560 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC6.47□□□□□ -1.37
BDNFP23560 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC6.47□□□□□ -1.37
BDNFP23560 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC6.47□□□□□ -1.37
BDNFP23560 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC6.47□□□□□ -1.37
BDNFP23560 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC6.47□□□□□ -1.37
BDNFP23560 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC6.47□□□□□ -1.37
BDNFP23560 AL645933.2-201ENST00000606743 1207 ntBASIC6.47□□□□□ -1.37
BDNFP23560 AC023813.4-201ENST00000607580 580 ntBASIC6.47□□□□□ -1.37
BDNFP23560 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC6.47□□□□□ -1.37
BDNFP23560 AL031658.2-201ENST00000616850 651 ntBASIC6.47□□□□□ -1.37
BDNFP23560 AF117829.2-201ENST00000619538 361 ntBASIC6.47□□□□□ -1.37
BDNFP23560 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC6.47□□□□□ -1.37
BDNFP23560 AC022400.9-201ENST00000623633 273 ntBASIC6.47□□□□□ -1.37
BDNFP23560 AC003992.1-201ENST00000635364 557 ntBASIC6.47□□□□□ -1.37
BDNFP23560 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC6.47□□□□□ -1.37
BDNFP23560 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
BDNFP23560 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
BDNFP23560 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms