Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
LIG1P18858 MLXIP-203ENST00000377037 805 ntTSL 5 BASIC7.7□□□□□ -1.18
LIG1P18858 RNA5SP176-201ENST00000390956 110 ntBASIC7.7□□□□□ -1.18
LIG1P18858 AL021331.1-201ENST00000402817 582 ntBASIC7.7□□□□□ -1.18
LIG1P18858 FCF1P5-201ENST00000406490 482 ntBASIC7.7□□□□□ -1.18
LIG1P18858 NUCB1-AS1-201ENST00000416432 433 ntTSL 2 BASIC7.7□□□□□ -1.18
LIG1P18858 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC7.7□□□□□ -1.18
LIG1P18858 NME1P1-201ENST00000420914 382 ntBASIC7.7□□□□□ -1.18
LIG1P18858 AC007365.2-201ENST00000428806 458 ntBASIC7.7□□□□□ -1.18
LIG1P18858 PUDPP2-201ENST00000431423 643 ntBASIC7.7□□□□□ -1.18
LIG1P18858 MTCO1P43-201ENST00000431831 488 ntBASIC7.7□□□□□ -1.18
LIG1P18858 TPTE2P6-202ENST00000445572 1007 ntBASIC7.7□□□□□ -1.18
LIG1P18858 AC026391.1-201ENST00000450677 537 ntTSL 3 BASIC7.7□□□□□ -1.18
LIG1P18858 AL157896.1-201ENST00000451617 790 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
LIG1P18858 NPM1P13-201ENST00000452663 865 ntBASIC7.7□□□□□ -1.18
LIG1P18858 MEF2AP1-201ENST00000454867 863 ntBASIC7.7□□□□□ -1.18
LIG1P18858 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC7.7□□□□□ -1.18
LIG1P18858 STARD13-IT1-201ENST00000456087 452 ntTSL 5 BASIC7.7□□□□□ -1.18
LIG1P18858 BX323845.2-201ENST00000458382 234 ntBASIC7.7□□□□□ -1.18
LIG1P18858 AC099328.2-201ENST00000465347 455 ntTSL 3 BASIC7.7□□□□□ -1.18
LIG1P18858 RCHY1-206ENST00000507014 650 ntTSL 3 BASIC7.7□□□□□ -1.18
LIG1P18858 AC111000.2-201ENST00000507775 550 ntBASIC7.7□□□□□ -1.18
LIG1P18858 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC7.7□□□□□ -1.18
LIG1P18858 DCAF13P2-201ENST00000514188 555 ntBASIC7.7□□□□□ -1.18
LIG1P18858 NPM1P52-201ENST00000518264 846 ntBASIC7.7□□□□□ -1.18
LIG1P18858 AP000426.1-201ENST00000518749 361 ntTSL 3 BASIC7.7□□□□□ -1.18
LIG1P18858 MTND2P26-201ENST00000528255 1029 ntBASIC7.7□□□□□ -1.18
LIG1P18858 CYB5AP5-201ENST00000549779 389 ntBASIC7.7□□□□□ -1.18
LIG1P18858 GNG2-208ENST00000554875 430 ntTSL 5 BASIC7.7□□□□□ -1.18
LIG1P18858 LINC02308-201ENST00000555001 637 ntTSL 2 BASIC7.7□□□□□ -1.18
LIG1P18858 AC092868.3-201ENST00000560515 784 ntBASIC7.7□□□□□ -1.18
LIG1P18858 AC018767.3-201ENST00000564185 481 ntTSL 3 BASIC7.7□□□□□ -1.18
LIG1P18858 AL161457.2-206ENST00000592778 802 ntTSL 5 BASIC7.7□□□□□ -1.18
LIG1P18858 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC7.7□□□□□ -1.18
LIG1P18858 AC004908.1-201ENST00000606572 541 ntBASIC7.7□□□□□ -1.18
LIG1P18858 AC007349.4-201ENST00000608114 532 ntBASIC7.7□□□□□ -1.18
LIG1P18858 5S_rRNA.23-201ENST00000612086 102 ntBASIC7.7□□□□□ -1.18
LIG1P18858 AL355073.2-201ENST00000612106 557 ntBASIC7.7□□□□□ -1.18
LIG1P18858 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC7.7□□□□□ -1.18
LIG1P18858 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC7.7□□□□□ -1.18
LIG1P18858 Metazoa_SRP.81-201ENST00000618466 316 ntBASIC7.7□□□□□ -1.18
LIG1P18858 AP000550.3-201ENST00000637734 379 ntBASIC7.7□□□□□ -1.18
LIG1P18858 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC7.7□□□□□ -1.18
LIG1P18858 AC008432.1-201ENST00000615912 1320 ntBASIC7.7□□□□□ -1.18
LIG1P18858 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC7.7□□□□□ -1.18
LIG1P18858 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
LIG1P18858 TTTY10-202ENST00000455084 1628 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
LIG1P18858 AP002370.1-201ENST00000528055 1602 ntBASIC7.7□□□□□ -1.18
LIG1P18858 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
LIG1P18858 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC7.7□□□□□ -1.18
LIG1P18858 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
LIG1P18858 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC7.7□□□□□ -1.18
LIG1P18858 SCRN1-202ENST00000409497 1732 ntAPPRIS P1 TSL 2 BASIC7.69□□□□□ -1.18
LIG1P18858 CACNB4-223ENST00000636380 1756 ntTSL 5 BASIC7.69□□□□□ -1.18
LIG1P18858 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC7.69□□□□□ -1.18
LIG1P18858 AC102941.1-201ENST00000567616 1537 ntBASIC7.69□□□□□ -1.18
LIG1P18858 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
LIG1P18858 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
LIG1P18858 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
LIG1P18858 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
LIG1P18858 KYNU-203ENST00000409512 1576 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
LIG1P18858 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC7.69□□□□□ -1.18
LIG1P18858 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
LIG1P18858 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC7.69□□□□□ -1.18
LIG1P18858 SMPX-201ENST00000379494 938 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
LIG1P18858 RNU6-481P-201ENST00000384194 107 ntBASIC7.69□□□□□ -1.18
LIG1P18858 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC7.69□□□□□ -1.18
LIG1P18858 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC7.69□□□□□ -1.18
LIG1P18858 RPL6-202ENST00000424576 1074 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
LIG1P18858 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC7.69□□□□□ -1.18
LIG1P18858 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC7.69□□□□□ -1.18
LIG1P18858 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC7.69□□□□□ -1.18
LIG1P18858 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC7.69□□□□□ -1.18
LIG1P18858 AL031667.1-201ENST00000440222 725 ntBASIC7.69□□□□□ -1.18
LIG1P18858 MTND4P25-201ENST00000441039 533 ntBASIC7.69□□□□□ -1.18
LIG1P18858 AC073072.2-201ENST00000447425 348 ntBASIC7.69□□□□□ -1.18
LIG1P18858 RPL31P20-201ENST00000449593 360 ntBASIC7.69□□□□□ -1.18
LIG1P18858 AL354872.1-201ENST00000456361 967 ntBASIC7.69□□□□□ -1.18
LIG1P18858 RPL6P9-201ENST00000466502 859 ntBASIC7.69□□□□□ -1.18
LIG1P18858 UCK2-206ENST00000470820 1083 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
LIG1P18858 STRADBP1-201ENST00000478954 1281 ntBASIC7.69□□□□□ -1.18
LIG1P18858 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC7.69□□□□□ -1.18
LIG1P18858 RPL23AP80-201ENST00000495605 424 ntBASIC7.69□□□□□ -1.18
LIG1P18858 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC7.69□□□□□ -1.18
LIG1P18858 SUMO2P4-201ENST00000504193 276 ntBASIC7.69□□□□□ -1.18
LIG1P18858 MGST2-204ENST00000506797 634 ntTSL 2 BASIC7.69□□□□□ -1.18
LIG1P18858 AC093770.1-201ENST00000511559 571 ntBASIC7.69□□□□□ -1.18
LIG1P18858 IGKV2D-38-201ENST00000518423 240 ntBASIC7.69□□□□□ -1.18
LIG1P18858 OR4A2P-201ENST00000527276 913 ntBASIC7.69□□□□□ -1.18
LIG1P18858 AC004923.2-201ENST00000529649 369 ntBASIC7.69□□□□□ -1.18
LIG1P18858 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC7.69□□□□□ -1.18
LIG1P18858 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
LIG1P18858 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC7.69□□□□□ -1.18
LIG1P18858 COPZ1-218ENST00000553231 551 ntTSL 5 BASIC7.69□□□□□ -1.18
LIG1P18858 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC7.69□□□□□ -1.18
LIG1P18858 WDR45BP1-201ENST00000583470 1029 ntBASIC7.69□□□□□ -1.18
LIG1P18858 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC7.69□□□□□ -1.18
LIG1P18858 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC7.69□□□□□ -1.18
LIG1P18858 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC7.69□□□□□ -1.18
LIG1P18858 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC7.69□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 117.9 ms