| PTPN2 | P17706 | PYGO1-202 | ENST00000563719 | 2653 nt | APPRIS P1 TSL 5 BASIC | 6.31 | □□□□□ -1.4 | | |
| PTPN2 | P17706 | DAAM1-202 | ENST00000395125 | 5806 nt | APPRIS P3 TSL 1 (best) BASIC | 6.31 | □□□□□ -1.4 | | |
| PTPN2 | P17706 | CERS3-203 | ENST00000538112 | 1856 nt | APPRIS P1 TSL 1 (best) BASIC | 6.31 | □□□□□ -1.4 | | |
| PTPN2 | P17706 | CD200R1-201 | ENST00000295863 | 1692 nt | TSL 2 BASIC | 6.31 | □□□□□ -1.4 | | |
| PTPN2 | P17706 | CLASP2-205 | ENST00000461133 | 4814 nt | TSL 5 BASIC | 6.31 | □□□□□ -1.4 | | |
| PTPN2 | P17706 | MRPS36-201 | ENST00000256441 | 1286 nt | APPRIS P1 TSL 1 (best) BASIC | 6.31 | □□□□□ -1.4 | | |
| PTPN2 | P17706 | SSX5-202 | ENST00000347757 | 1261 nt | APPRIS ALT2 TSL 5 BASIC | 6.31 | □□□□□ -1.4 | | |
| PTPN2 | P17706 | MIR375-201 | ENST00000362103 | 64 nt | BASIC | 6.31 | □□□□□ -1.4 | | |
| PTPN2 | P17706 | SSX5-203 | ENST00000376923 | 1208 nt | APPRIS ALT2 TSL 5 BASIC | 6.31 | □□□□□ -1.4 | | |
| PTPN2 | P17706 | SMARCA2-207 | ENST00000382186 | 955 nt | TSL 3 BASIC | 6.31 | □□□□□ -1.4 | | |
| PTPN2 | P17706 | RNU6-891P-201 | ENST00000384280 | 111 nt | BASIC | 6.31 | □□□□□ -1.4 | | |
| PTPN2 | P17706 | AL136116.2-201 | ENST00000404020 | 785 nt | BASIC | 6.31 | □□□□□ -1.4 | | |
| PTPN2 | P17706 | CPB2-AS1-201 | ENST00000415033 | 747 nt | TSL 3 BASIC | 6.31 | □□□□□ -1.4 | | |
| PTPN2 | P17706 | AL121776.1-201 | ENST00000429337 | 372 nt | BASIC | 6.31 | □□□□□ -1.4 | | |
| PTPN2 | P17706 | SLC6A13-202 | ENST00000436453 | 1101 nt | TSL 1 (best) BASIC | 6.31 | □□□□□ -1.4 | | |
| PTPN2 | P17706 | RPL23AP60-201 | ENST00000450011 | 454 nt | BASIC | 6.31 | □□□□□ -1.4 | | |
| PTPN2 | P17706 | AC104849.1-201 | ENST00000462623 | 405 nt | BASIC | 6.31 | □□□□□ -1.4 | | |
| PTPN2 | P17706 | RPSAP39-201 | ENST00000467439 | 883 nt | BASIC | 6.31 | □□□□□ -1.4 | | |
| PTPN2 | P17706 | AK5-208 | ENST00000478255 | 556 nt | TSL 2 BASIC | 6.31 | □□□□□ -1.4 | | |
| PTPN2 | P17706 | AC245041.2-201 | ENST00000479781 | 376 nt | TSL 5 BASIC | 6.31 | □□□□□ -1.4 | | |
| PTPN2 | P17706 | LINC02503-201 | ENST00000510505 | 812 nt | TSL 2 BASIC | 6.31 | □□□□□ -1.4 | | |
| PTPN2 | P17706 | AC017091.1-202 | ENST00000510941 | 504 nt | TSL 3 BASIC | 6.31 | □□□□□ -1.4 | | |
| PTPN2 | P17706 | AC011389.1-203 | ENST00000513790 | 573 nt | TSL 4 BASIC | 6.31 | □□□□□ -1.4 | | |
| PTPN2 | P17706 | CYCSP22-201 | ENST00000517555 | 339 nt | BASIC | 6.31 | □□□□□ -1.4 | | |
| PTPN2 | P17706 | AC097173.2-201 | ENST00000518701 | 474 nt | TSL 3 BASIC | 6.31 | □□□□□ -1.4 | | |
| PTPN2 | P17706 | IGHVIII-67-4-201 | ENST00000524281 | 296 nt | BASIC | 6.31 | □□□□□ -1.4 | | |
| PTPN2 | P17706 | AC130364.2-201 | ENST00000528639 | 604 nt | BASIC | 6.31 | □□□□□ -1.4 | | |
| PTPN2 | P17706 | OR6M2P-201 | ENST00000529831 | 871 nt | BASIC | 6.31 | □□□□□ -1.4 | | |
| PTPN2 | P17706 | AP002754.2-201 | ENST00000542121 | 462 nt | TSL 5 BASIC | 6.31 | □□□□□ -1.4 | | |
| PTPN2 | P17706 | LINC02552-203 | ENST00000545630 | 583 nt | TSL 2 BASIC | 6.31 | □□□□□ -1.4 | | |
| PTPN2 | P17706 | AL390816.1-201 | ENST00000553990 | 322 nt | TSL 3 BASIC | 6.31 | □□□□□ -1.4 | | |
| PTPN2 | P17706 | AC006530.1-201 | ENST00000555980 | 571 nt | BASIC | 6.31 | □□□□□ -1.4 | | |
| PTPN2 | P17706 | AC099850.2-201 | ENST00000577660 | 557 nt | APPRIS P1 TSL 3 BASIC | 6.31 | □□□□□ -1.4 | | |
| PTPN2 | P17706 | AC091151.1-201 | ENST00000587369 | 726 nt | TSL 1 (best) BASIC | 6.31 | □□□□□ -1.4 | | |
| PTPN2 | P17706 | AC007620.3-201 | ENST00000608131 | 497 nt | BASIC | 6.31 | □□□□□ -1.4 | | |
| PTPN2 | P17706 | RNA5SP440-201 | ENST00000612665 | 119 nt | BASIC | 6.31 | □□□□□ -1.4 | | |
| PTPN2 | P17706 | AC004477.3-201 | ENST00000614061 | 590 nt | BASIC | 6.31 | □□□□□ -1.4 | | |
| PTPN2 | P17706 | AP003400.6-201 | ENST00000624698 | 740 nt | BASIC | 6.31 | □□□□□ -1.4 | | |
| PTPN2 | P17706 | IGLV10-54-202 | ENST00000640991 | 351 nt | TSL 5 BASIC | 6.31 | □□□□□ -1.4 | | |
| PTPN2 | P17706 | AC116667.2-201 | ENST00000641075 | 823 nt | BASIC | 6.31 | □□□□□ -1.4 | | |
| PTPN2 | P17706 | OR2M3-202 | ENST00000641626 | 9913 nt | APPRIS P1 BASIC | 6.31 | □□□□□ -1.4 | | |
| PTPN2 | P17706 | IKZF3-210 | ENST00000377958 | 1837 nt | TSL 1 (best) BASIC | 6.31 | □□□□□ -1.4 | | |
| PTPN2 | P17706 | DNHD1-212 | ENST00000527990 | 14298 nt | APPRIS P1 TSL 5 BASIC | 6.31 | □□□□□ -1.4 | | |
| PTPN2 | P17706 | CACNA1E-204 | ENST00000367567 | 14757 nt | APPRIS ALT2 TSL 5 BASIC | 6.31 | □□□□□ -1.4 | | |
| PTPN2 | P17706 | CASC8-203 | ENST00000502082 | 1420 nt | TSL 1 (best) BASIC | 6.31 | □□□□□ -1.4 | | |
| PTPN2 | P17706 | NCOR1-201 | ENST00000268712 | 10720 nt | APPRIS P1 TSL 1 (best) BASIC | 6.31 | □□□□□ -1.4 | | |
| PTPN2 | P17706 | LGI1-212 | ENST00000630184 | 2936 nt | TSL 2 BASIC | 6.31 | □□□□□ -1.4 | | |
| PTPN2 | P17706 | LINC01378-201 | ENST00000422145 | 2516 nt | TSL 3 BASIC | 6.31 | □□□□□ -1.4 | | |
| PTPN2 | P17706 | RIMS1-205 | ENST00000414192 | 1787 nt | TSL 2 BASIC | 6.31 | □□□□□ -1.4 | | |
| PTPN2 | P17706 | SLC35F5-213 | ENST00000638402 | 1554 nt | TSL 5 BASIC | 6.31 | □□□□□ -1.4 | | |
| PTPN2 | P17706 | OR7D2-202 | ENST00000641288 | 3248 nt | APPRIS P1 BASIC | 6.31 | □□□□□ -1.4 | | |
| PTPN2 | P17706 | AC016907.2-203 | ENST00000455424 | 3563 nt | TSL 3 BASIC | 6.31 | □□□□□ -1.4 | | |
| PTPN2 | P17706 | FBXO38-218 | ENST00000513826 | 3585 nt | TSL 1 (best) BASIC | 6.31 | □□□□□ -1.4 | | |
| PTPN2 | P17706 | AC087516.2-201 | ENST00000558963 | 3042 nt | TSL 3 BASIC | 6.31 | □□□□□ -1.4 | | |
| PTPN2 | P17706 | DTNA-206 | ENST00000399121 | 6490 nt | APPRIS ALT2 TSL 1 (best) BASIC | 6.31 | □□□□□ -1.4 | | |
| PTPN2 | P17706 | ZNF283-203 | ENST00000588797 | 2428 nt | TSL 2 BASIC | 6.3 | □□□□□ -1.4 | | |
| PTPN2 | P17706 | AC093671.1-201 | ENST00000624981 | 2929 nt | BASIC | 6.3 | □□□□□ -1.4 | | |
| PTPN2 | P17706 | MNS1-201 | ENST00000260453 | 2023 nt | APPRIS P1 TSL 1 (best) BASIC | 6.3 | □□□□□ -1.4 | | |
| PTPN2 | P17706 | KIAA0232-201 | ENST00000307659 | 7841 nt | APPRIS P1 TSL 1 (best) BASIC | 6.3 | □□□□□ -1.4 | | |
| PTPN2 | P17706 | KIAA0586-203 | ENST00000423743 | 5339 nt | APPRIS ALT2 TSL 1 (best) BASIC | 6.3 | □□□□□ -1.4 | | |
| PTPN2 | P17706 | SETDB2-205 | ENST00000611815 | 5313 nt | APPRIS ALT2 TSL 5 BASIC | 6.3 | □□□□□ -1.4 | | |
| PTPN2 | P17706 | LINC00939-201 | ENST00000502479 | 4972 nt | TSL 1 (best) BASIC | 6.3 | □□□□□ -1.4 | | |
| PTPN2 | P17706 | MUC5B-204 | ENST00000529681 | 17911 nt | APPRIS P1 TSL 5 BASIC | 6.3 | □□□□□ -1.4 | | |
| PTPN2 | P17706 | CEACAM1-203 | ENST00000352591 | 3170 nt | TSL 1 (best) BASIC | 6.3 | □□□□□ -1.4 | | |
| PTPN2 | P17706 | ZNF610-208 | ENST00000613461 | 1643 nt | APPRIS ALT2 TSL 1 (best) BASIC | 6.3 | □□□□□ -1.4 | | |
| PTPN2 | P17706 | UQCR10-201 | ENST00000330029 | 916 nt | APPRIS P1 TSL 1 (best) BASIC | 6.3 | □□□□□ -1.4 | | |
| PTPN2 | P17706 | KRTAP23-1-201 | ENST00000334160 | 211 nt | APPRIS P1 BASIC | 6.3 | □□□□□ -1.4 | | |
| PTPN2 | P17706 | AL513325.1-201 | ENST00000417716 | 1034 nt | BASIC | 6.3 | □□□□□ -1.4 | | |
| PTPN2 | P17706 | CASP5-203 | ENST00000418434 | 1023 nt | TSL 5 BASIC | 6.3 | □□□□□ -1.4 | | |
| PTPN2 | P17706 | RPL34P3-201 | ENST00000421454 | 338 nt | BASIC | 6.3 | □□□□□ -1.4 | | |
| PTPN2 | P17706 | LINC00383-201 | ENST00000433664 | 817 nt | TSL 3 BASIC | 6.3 | □□□□□ -1.4 | | |
| PTPN2 | P17706 | AC003991.1-210 | ENST00000434733 | 1048 nt | TSL 3 BASIC | 6.3 | □□□□□ -1.4 | | |
| PTPN2 | P17706 | AL445238.1-201 | ENST00000450029 | 712 nt | TSL 2 BASIC | 6.3 | □□□□□ -1.4 | | |
| PTPN2 | P17706 | AC089999.1-201 | ENST00000460336 | 374 nt | BASIC | 6.3 | □□□□□ -1.4 | | |
| PTPN2 | P17706 | B4GALT4-AS1-201 | ENST00000470790 | 544 nt | TSL 5 BASIC | 6.3 | □□□□□ -1.4 | | |
| PTPN2 | P17706 | RN7SL177P-201 | ENST00000476596 | 299 nt | BASIC | 6.3 | □□□□□ -1.4 | | |
| PTPN2 | P17706 | RN7SL57P-201 | ENST00000493687 | 290 nt | BASIC | 6.3 | □□□□□ -1.4 | | |
| PTPN2 | P17706 | SNORA70.20-201 | ENST00000516848 | 126 nt | BASIC | 6.3 | □□□□□ -1.4 | | |
| PTPN2 | P17706 | AP001208.1-201 | ENST00000518612 | 408 nt | TSL 3 BASIC | 6.3 | □□□□□ -1.4 | | |
| PTPN2 | P17706 | EIF5AL1-201 | ENST00000520547 | 3840 nt | APPRIS P1 BASIC | 6.3 | □□□□□ -1.4 | | |
| PTPN2 | P17706 | KCTD9P6-201 | ENST00000522306 | 950 nt | BASIC | 6.3 | □□□□□ -1.4 | | |
| PTPN2 | P17706 | AC013652.1-202 | ENST00000561058 | 570 nt | TSL 4 BASIC | 6.3 | □□□□□ -1.4 | | |
| PTPN2 | P17706 | TMEM159-205 | ENST00000572599 | 713 nt | APPRIS P1 TSL 5 BASIC | 6.3 | □□□□□ -1.4 | | |
| PTPN2 | P17706 | RNU4ATAC-201 | ENST00000580972 | 127 nt | BASIC | 6.3 | □□□□□ -1.4 | | |
| PTPN2 | P17706 | AC008109.1-201 | ENST00000583163 | 826 nt | TSL 2 BASIC | 6.3 | □□□□□ -1.4 | | |
| PTPN2 | P17706 | AC008770.4-201 | ENST00000586394 | 468 nt | TSL 3 BASIC | 6.3 | □□□□□ -1.4 | | |
| PTPN2 | P17706 | AC008794.2-201 | ENST00000587779 | 293 nt | TSL 2 BASIC | 6.3 | □□□□□ -1.4 | | |
| PTPN2 | P17706 | AL021918.2-201 | ENST00000613415 | 194 nt | BASIC | 6.3 | □□□□□ -1.4 | | |
| PTPN2 | P17706 | AC022467.1-201 | ENST00000614738 | 749 nt | BASIC | 6.3 | □□□□□ -1.4 | | |
| PTPN2 | P17706 | LINC02033-201 | ENST00000623207 | 971 nt | TSL 2 BASIC | 6.3 | □□□□□ -1.4 | | |
| PTPN2 | P17706 | PCBP1-AS1-282 | ENST00000625783 | 826 nt | TSL 5 BASIC | 6.3 | □□□□□ -1.4 | | |
| PTPN2 | P17706 | MIR193BHG-214 | ENST00000641765 | 509 nt | BASIC | 6.3 | □□□□□ -1.4 | | |
| PTPN2 | P17706 | ZPLD1-201 | ENST00000306176 | 3619 nt | TSL 1 (best) BASIC | 6.3 | □□□□□ -1.4 | | |
| PTPN2 | P17706 | AC011604.2-201 | ENST00000381541 | 2268 nt | APPRIS ALT2 TSL 2 BASIC | 6.3 | □□□□□ -1.4 | | |
| PTPN2 | P17706 | RBM44-206 | ENST00000611254 | 1427 nt | TSL 2 BASIC | 6.3 | □□□□□ -1.4 | | |
| PTPN2 | P17706 | PHEX-AS1-201 | ENST00000424650 | 1906 nt | TSL 2 BASIC | 6.3 | □□□□□ -1.4 | | |
| PTPN2 | P17706 | ZNF735-201 | ENST00000429565 | 1570 nt | APPRIS P1 TSL 5 BASIC | 6.3 | □□□□□ -1.4 | | |
| PTPN2 | P17706 | AC011369.2-201 | ENST00000624423 | 1567 nt | BASIC | 6.3 | □□□□□ -1.4 | | |
| PTPN2 | P17706 | FAM205A-201 | ENST00000378788 | 4225 nt | APPRIS P1 TSL 2 BASIC | 6.3 | □□□□□ -1.4 | | |
| PTPN2 | P17706 | TOR1AIP1-202 | ENST00000435319 | 3397 nt | APPRIS ALT2 TSL 1 (best) BASIC | 6.3 | □□□□□ -1.4 | | |