Protein–RNA interactions for Protein: P16410

CTLA4, Cytotoxic T-lymphocyte protein 4, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTLA4P16410 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC5.04□□□□□ -1.6
CTLA4P16410 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.04□□□□□ -1.6
CTLA4P16410 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC5.04□□□□□ -1.6
CTLA4P16410 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC5.04□□□□□ -1.6
CTLA4P16410 COX6CP7-201ENST00000597056 208 ntBASIC5.04□□□□□ -1.6
CTLA4P16410 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC5.04□□□□□ -1.6
CTLA4P16410 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC5.04□□□□□ -1.6
CTLA4P16410 AL352984.2-201ENST00000611153 546 ntBASIC5.04□□□□□ -1.6
CTLA4P16410 AC090607.5-201ENST00000615692 224 ntBASIC5.04□□□□□ -1.6
CTLA4P16410 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.04□□□□□ -1.6
CTLA4P16410 AC005899.7-201ENST00000618199 588 ntBASIC5.04□□□□□ -1.6
CTLA4P16410 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CTLA4P16410 AC073593.1-201ENST00000624500 411 ntBASIC5.04□□□□□ -1.6
CTLA4P16410 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
CTLA4P16410 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.04□□□□□ -1.6
CTLA4P16410 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CTLA4P16410 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.04□□□□□ -1.6
CTLA4P16410 AL137058.3-201ENST00000624531 3099 ntBASIC5.04□□□□□ -1.6
CTLA4P16410 IFIT1P1-201ENST00000400497 1449 ntBASIC5.04□□□□□ -1.6
CTLA4P16410 BX284613.1-201ENST00000452221 1641 ntBASIC5.04□□□□□ -1.6
CTLA4P16410 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
CTLA4P16410 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
CTLA4P16410 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CTLA4P16410 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
CTLA4P16410 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
CTLA4P16410 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CTLA4P16410 AL034546.1-201ENST00000623740 3693 ntBASIC5.03□□□□□ -1.6
CTLA4P16410 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
CTLA4P16410 SLC9B1P1-201ENST00000331172 1337 ntBASIC5.03□□□□□ -1.6
CTLA4P16410 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CTLA4P16410 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CTLA4P16410 CASC19-260ENST00000641828 2001 ntBASIC5.03□□□□□ -1.6
CTLA4P16410 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.03□□□□□ -1.6
CTLA4P16410 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CTLA4P16410 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
CTLA4P16410 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
CTLA4P16410 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.03□□□□□ -1.6
CTLA4P16410 AL158827.1-201ENST00000416300 391 ntBASIC5.03□□□□□ -1.6
CTLA4P16410 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.03□□□□□ -1.6
CTLA4P16410 AK4P4-201ENST00000419465 646 ntBASIC5.03□□□□□ -1.6
CTLA4P16410 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC5.03□□□□□ -1.6
CTLA4P16410 TMEM183AP1-205ENST00000432739 290 ntBASIC5.03□□□□□ -1.6
CTLA4P16410 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CTLA4P16410 AC110602.1-201ENST00000437414 318 ntBASIC5.03□□□□□ -1.6
CTLA4P16410 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.03□□□□□ -1.6
CTLA4P16410 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC5.03□□□□□ -1.6
CTLA4P16410 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC5.03□□□□□ -1.6
CTLA4P16410 AC019084.1-201ENST00000457337 432 ntBASIC5.03□□□□□ -1.6
CTLA4P16410 SNORD125-201ENST00000459538 96 ntBASIC5.03□□□□□ -1.6
CTLA4P16410 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC5.03□□□□□ -1.6
CTLA4P16410 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC5.03□□□□□ -1.6
CTLA4P16410 AP000648.1-201ENST00000529682 397 ntBASIC5.03□□□□□ -1.6
CTLA4P16410 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.03□□□□□ -1.6
CTLA4P16410 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC5.03□□□□□ -1.6
CTLA4P16410 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC5.03□□□□□ -1.6
CTLA4P16410 HSPE1P2-201ENST00000554777 306 ntBASIC5.03□□□□□ -1.6
CTLA4P16410 AC005899.5-201ENST00000584721 552 ntTSL 5 BASIC5.03□□□□□ -1.6
CTLA4P16410 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CTLA4P16410 AL031601.1-201ENST00000605702 394 ntBASIC5.03□□□□□ -1.6
CTLA4P16410 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CTLA4P16410 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC5.03□□□□□ -1.6
CTLA4P16410 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC5.03□□□□□ -1.6
CTLA4P16410 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC5.03□□□□□ -1.6
CTLA4P16410 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CTLA4P16410 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC5.03□□□□□ -1.6
CTLA4P16410 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.03□□□□□ -1.6
CTLA4P16410 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.03□□□□□ -1.6
CTLA4P16410 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.03□□□□□ -1.6
CTLA4P16410 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC5.03□□□□□ -1.6
CTLA4P16410 GTF2IP4-201ENST00000453092 2054 ntBASIC5.03□□□□□ -1.6
CTLA4P16410 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.03□□□□□ -1.6
CTLA4P16410 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.03□□□□□ -1.6
CTLA4P16410 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC5.02□□□□□ -1.61
CTLA4P16410 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CTLA4P16410 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC5.02□□□□□ -1.61
CTLA4P16410 PWAR1-201ENST00000624188 2414 ntBASIC5.02□□□□□ -1.61
CTLA4P16410 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CTLA4P16410 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CTLA4P16410 OR4F13P-202ENST00000560066 2054 ntBASIC5.02□□□□□ -1.61
CTLA4P16410 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CTLA4P16410 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CTLA4P16410 RNA5SP30-201ENST00000365552 115 ntBASIC5.02□□□□□ -1.61
CTLA4P16410 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.02□□□□□ -1.61
CTLA4P16410 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CTLA4P16410 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
CTLA4P16410 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
CTLA4P16410 RPS6P23-201ENST00000413224 722 ntBASIC5.02□□□□□ -1.61
CTLA4P16410 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.02□□□□□ -1.61
CTLA4P16410 NENFP1-201ENST00000419476 466 ntBASIC5.02□□□□□ -1.61
CTLA4P16410 LDHAP2-201ENST00000437325 985 ntBASIC5.02□□□□□ -1.61
CTLA4P16410 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC5.02□□□□□ -1.61
CTLA4P16410 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CTLA4P16410 AL359839.1-201ENST00000451975 1160 ntBASIC5.02□□□□□ -1.61
CTLA4P16410 RN7SL168P-201ENST00000463821 279 ntBASIC5.02□□□□□ -1.61
CTLA4P16410 RN7SL170P-201ENST00000487098 295 ntBASIC5.02□□□□□ -1.61
CTLA4P16410 MAL2-207ENST00000522828 603 ntTSL 3 BASIC5.02□□□□□ -1.61
CTLA4P16410 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC5.02□□□□□ -1.61
CTLA4P16410 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC5.02□□□□□ -1.61
CTLA4P16410 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.02□□□□□ -1.61
CTLA4P16410 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms