Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 GAPDHP62-201ENST00000515313 990 ntBASIC5.75□□□□□ -1.49
HLA-DQB2P05538 SNORD46.2-201ENST00000516021 102 ntBASIC5.75□□□□□ -1.49
HLA-DQB2P05538 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC5.75□□□□□ -1.49
HLA-DQB2P05538 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC5.75□□□□□ -1.49
HLA-DQB2P05538 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC5.75□□□□□ -1.49
HLA-DQB2P05538 AL138960.1-201ENST00000613838 513 ntBASIC5.75□□□□□ -1.49
HLA-DQB2P05538 AL390318.1-201ENST00000624564 687 ntBASIC5.75□□□□□ -1.49
HLA-DQB2P05538 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC5.75□□□□□ -1.49
HLA-DQB2P05538 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
HLA-DQB2P05538 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
HLA-DQB2P05538 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
HLA-DQB2P05538 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
HLA-DQB2P05538 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
HLA-DQB2P05538 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC5.75□□□□□ -1.49
HLA-DQB2P05538 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC5.75□□□□□ -1.49
HLA-DQB2P05538 SRRM1P3-201ENST00000426911 2678 ntBASIC5.75□□□□□ -1.49
HLA-DQB2P05538 UGT2B24P-201ENST00000514441 1597 ntBASIC5.75□□□□□ -1.49
HLA-DQB2P05538 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
HLA-DQB2P05538 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
HLA-DQB2P05538 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
HLA-DQB2P05538 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
HLA-DQB2P05538 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
HLA-DQB2P05538 AC068870.1-201ENST00000563737 2455 ntBASIC5.74□□□□□ -1.49
HLA-DQB2P05538 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
HLA-DQB2P05538 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
HLA-DQB2P05538 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
HLA-DQB2P05538 AC015689.2-201ENST00000528172 1738 ntBASIC5.74□□□□□ -1.49
HLA-DQB2P05538 AL034546.1-201ENST00000623740 3693 ntBASIC5.74□□□□□ -1.49
HLA-DQB2P05538 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
HLA-DQB2P05538 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
HLA-DQB2P05538 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.74□□□□□ -1.49
HLA-DQB2P05538 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
HLA-DQB2P05538 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
HLA-DQB2P05538 GAPDHP24-201ENST00000328713 983 ntBASIC5.74□□□□□ -1.49
HLA-DQB2P05538 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
HLA-DQB2P05538 AL121886.1-201ENST00000358609 435 ntBASIC5.74□□□□□ -1.49
HLA-DQB2P05538 RN7SKP292-201ENST00000365522 317 ntBASIC5.74□□□□□ -1.49
HLA-DQB2P05538 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
HLA-DQB2P05538 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
HLA-DQB2P05538 OOSP1-201ENST00000398992 1270 ntBASIC5.74□□□□□ -1.49
HLA-DQB2P05538 RMRPP5-201ENST00000411156 267 ntBASIC5.74□□□□□ -1.49
HLA-DQB2P05538 NME1P1-201ENST00000420914 382 ntBASIC5.74□□□□□ -1.49
HLA-DQB2P05538 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC5.74□□□□□ -1.49
HLA-DQB2P05538 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
HLA-DQB2P05538 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.74□□□□□ -1.49
HLA-DQB2P05538 TMEM183AP1-205ENST00000432739 290 ntBASIC5.74□□□□□ -1.49
HLA-DQB2P05538 SUMO2P3-201ENST00000438311 288 ntBASIC5.74□□□□□ -1.49
HLA-DQB2P05538 AC073109.1-201ENST00000445066 978 ntBASIC5.74□□□□□ -1.49
HLA-DQB2P05538 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC5.74□□□□□ -1.49
HLA-DQB2P05538 RPS23P9-201ENST00000448848 438 ntBASIC5.74□□□□□ -1.49
HLA-DQB2P05538 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC5.74□□□□□ -1.49
HLA-DQB2P05538 PSMA2P2-201ENST00000504319 686 ntBASIC5.74□□□□□ -1.49
HLA-DQB2P05538 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.74□□□□□ -1.49
HLA-DQB2P05538 RNU6-615P-201ENST00000516065 106 ntBASIC5.74□□□□□ -1.49
HLA-DQB2P05538 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC5.74□□□□□ -1.49
HLA-DQB2P05538 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.74□□□□□ -1.49
HLA-DQB2P05538 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC5.74□□□□□ -1.49
HLA-DQB2P05538 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.74□□□□□ -1.49
HLA-DQB2P05538 AP001496.3-201ENST00000580230 913 ntBASIC5.74□□□□□ -1.49
HLA-DQB2P05538 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC5.74□□□□□ -1.49
HLA-DQB2P05538 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC5.74□□□□□ -1.49
HLA-DQB2P05538 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.74□□□□□ -1.49
HLA-DQB2P05538 MIR193BHG-214ENST00000641765 509 ntBASIC5.74□□□□□ -1.49
HLA-DQB2P05538 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
HLA-DQB2P05538 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
HLA-DQB2P05538 AC104964.3-201ENST00000606115 2860 ntBASIC5.74□□□□□ -1.49
HLA-DQB2P05538 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC5.74□□□□□ -1.49
HLA-DQB2P05538 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
HLA-DQB2P05538 OR13C1P-202ENST00000641378 2919 ntBASIC5.74□□□□□ -1.49
HLA-DQB2P05538 AC232271.1-201ENST00000602455 2715 ntBASIC5.74□□□□□ -1.49
HLA-DQB2P05538 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.74□□□□□ -1.49
HLA-DQB2P05538 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.74□□□□□ -1.49
HLA-DQB2P05538 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
HLA-DQB2P05538 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
HLA-DQB2P05538 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
HLA-DQB2P05538 RPS2P45-201ENST00000469997 2057 ntBASIC5.73□□□□□ -1.49
HLA-DQB2P05538 HSPD1P7-201ENST00000447985 1686 ntBASIC5.73□□□□□ -1.49
HLA-DQB2P05538 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
HLA-DQB2P05538 MSL3P1-202ENST00000440028 1468 ntBASIC5.73□□□□□ -1.49
HLA-DQB2P05538 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.73□□□□□ -1.49
HLA-DQB2P05538 AC123769.1-201ENST00000530992 3192 ntBASIC5.73□□□□□ -1.49
HLA-DQB2P05538 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.73□□□□□ -1.49
HLA-DQB2P05538 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
HLA-DQB2P05538 SNORA11.5-201ENST00000408163 128 ntBASIC5.73□□□□□ -1.49
HLA-DQB2P05538 EEF1B2P8-201ENST00000414101 671 ntBASIC5.73□□□□□ -1.49
HLA-DQB2P05538 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC5.73□□□□□ -1.49
HLA-DQB2P05538 AC093155.2-201ENST00000420734 937 ntBASIC5.73□□□□□ -1.49
HLA-DQB2P05538 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC5.73□□□□□ -1.49
HLA-DQB2P05538 OR10T1P-201ENST00000424327 947 ntBASIC5.73□□□□□ -1.49
HLA-DQB2P05538 BX119321.1-201ENST00000428912 797 ntBASIC5.73□□□□□ -1.49
HLA-DQB2P05538 AC002069.1-201ENST00000429649 1159 ntBASIC5.73□□□□□ -1.49
HLA-DQB2P05538 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC5.73□□□□□ -1.49
HLA-DQB2P05538 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC5.73□□□□□ -1.49
HLA-DQB2P05538 AC006335.2-201ENST00000437993 330 ntBASIC5.73□□□□□ -1.49
HLA-DQB2P05538 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.73□□□□□ -1.49
HLA-DQB2P05538 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.73□□□□□ -1.49
HLA-DQB2P05538 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC5.73□□□□□ -1.49
HLA-DQB2P05538 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC5.73□□□□□ -1.49
HLA-DQB2P05538 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
HLA-DQB2P05538 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 117.8 ms