Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 AC091917.2-201ENST00000505002 744 ntBASIC5.6□□□□□ -1.51
SLC28A1O00337 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC5.6□□□□□ -1.51
SLC28A1O00337 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC5.6□□□□□ -1.51
SLC28A1O00337 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC5.6□□□□□ -1.51
SLC28A1O00337 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC5.6□□□□□ -1.51
SLC28A1O00337 AC021146.10-201ENST00000515628 706 ntBASIC5.6□□□□□ -1.51
SLC28A1O00337 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC5.6□□□□□ -1.51
SLC28A1O00337 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
SLC28A1O00337 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC5.6□□□□□ -1.51
SLC28A1O00337 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.6□□□□□ -1.51
SLC28A1O00337 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC5.6□□□□□ -1.51
SLC28A1O00337 AL157871.4-201ENST00000557226 385 ntTSL 2 BASIC5.6□□□□□ -1.51
SLC28A1O00337 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC5.6□□□□□ -1.51
SLC28A1O00337 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC5.6□□□□□ -1.51
SLC28A1O00337 AP005119.1-201ENST00000580956 292 ntBASIC5.6□□□□□ -1.51
SLC28A1O00337 AC005244.1-201ENST00000582566 339 ntBASIC5.6□□□□□ -1.51
SLC28A1O00337 AL136131.3-201ENST00000607600 188 ntBASIC5.6□□□□□ -1.51
SLC28A1O00337 uc_338.31-201ENST00000615595 186 ntBASIC5.6□□□□□ -1.51
SLC28A1O00337 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC5.6□□□□□ -1.51
SLC28A1O00337 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SLC28A1O00337 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
SLC28A1O00337 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SLC28A1O00337 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.6□□□□□ -1.51
SLC28A1O00337 THAP12P8-201ENST00000447914 2115 ntBASIC5.6□□□□□ -1.51
SLC28A1O00337 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SLC28A1O00337 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SLC28A1O00337 AC093909.5-201ENST00000621839 1799 ntBASIC5.6□□□□□ -1.51
SLC28A1O00337 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SLC28A1O00337 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SLC28A1O00337 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC5.59□□□□□ -1.51
SLC28A1O00337 QRSL1P1-201ENST00000400977 1540 ntBASIC5.59□□□□□ -1.51
SLC28A1O00337 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SLC28A1O00337 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SLC28A1O00337 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SLC28A1O00337 AC116158.1-201ENST00000560231 2129 ntBASIC5.59□□□□□ -1.51
SLC28A1O00337 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
SLC28A1O00337 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SLC28A1O00337 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SLC28A1O00337 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.59□□□□□ -1.51
SLC28A1O00337 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SLC28A1O00337 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC5.59□□□□□ -1.51
SLC28A1O00337 RBBP4P5-201ENST00000398583 1266 ntBASIC5.59□□□□□ -1.51
SLC28A1O00337 AL158827.1-201ENST00000416300 391 ntBASIC5.59□□□□□ -1.51
SLC28A1O00337 THEM7P-201ENST00000419556 672 ntBASIC5.59□□□□□ -1.51
SLC28A1O00337 AC019205.1-201ENST00000421830 730 ntBASIC5.59□□□□□ -1.51
SLC28A1O00337 GAPDHP59-201ENST00000435908 267 ntBASIC5.59□□□□□ -1.51
SLC28A1O00337 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
SLC28A1O00337 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC5.59□□□□□ -1.51
SLC28A1O00337 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
SLC28A1O00337 AC097463.1-201ENST00000447288 481 ntBASIC5.59□□□□□ -1.51
SLC28A1O00337 MTND6P5-201ENST00000448266 512 ntBASIC5.59□□□□□ -1.51
SLC28A1O00337 AC005077.1-201ENST00000449226 375 ntBASIC5.59□□□□□ -1.51
SLC28A1O00337 GEMIN2P1-201ENST00000454246 752 ntBASIC5.59□□□□□ -1.51
SLC28A1O00337 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC5.59□□□□□ -1.51
SLC28A1O00337 AC016687.1-201ENST00000482574 353 ntBASIC5.59□□□□□ -1.51
SLC28A1O00337 AC105420.1-201ENST00000504389 582 ntBASIC5.59□□□□□ -1.51
SLC28A1O00337 AC112484.3-201ENST00000505910 329 ntBASIC5.59□□□□□ -1.51
SLC28A1O00337 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC5.59□□□□□ -1.51
SLC28A1O00337 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC5.59□□□□□ -1.51
SLC28A1O00337 GAPDHP62-201ENST00000515313 990 ntBASIC5.59□□□□□ -1.51
SLC28A1O00337 AC097486.1-201ENST00000515331 210 ntBASIC5.59□□□□□ -1.51
SLC28A1O00337 AC116917.1-201ENST00000520558 305 ntBASIC5.59□□□□□ -1.51
SLC28A1O00337 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC5.59□□□□□ -1.51
SLC28A1O00337 HNRNPRP2-201ENST00000528421 743 ntBASIC5.59□□□□□ -1.51
SLC28A1O00337 RAB30-209ENST00000532548 644 ntTSL 3 BASIC5.59□□□□□ -1.51
SLC28A1O00337 OR4A41P-201ENST00000533053 928 ntBASIC5.59□□□□□ -1.51
SLC28A1O00337 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.59□□□□□ -1.51
SLC28A1O00337 AL353729.2-201ENST00000605859 1249 ntBASIC5.59□□□□□ -1.51
SLC28A1O00337 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SLC28A1O00337 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SLC28A1O00337 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
SLC28A1O00337 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.52
SLC28A1O00337 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
SLC28A1O00337 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.59□□□□□ -1.52
SLC28A1O00337 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
SLC28A1O00337 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.59□□□□□ -1.52
SLC28A1O00337 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.58□□□□□ -1.52
SLC28A1O00337 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SLC28A1O00337 AC016745.2-201ENST00000608834 3443 ntBASIC5.58□□□□□ -1.52
SLC28A1O00337 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.58□□□□□ -1.52
SLC28A1O00337 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
SLC28A1O00337 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
SLC28A1O00337 PARP4P2-201ENST00000446672 3326 ntBASIC5.58□□□□□ -1.52
SLC28A1O00337 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.58□□□□□ -1.52
SLC28A1O00337 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.58□□□□□ -1.52
SLC28A1O00337 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC5.58□□□□□ -1.52
SLC28A1O00337 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC5.58□□□□□ -1.52
SLC28A1O00337 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.58□□□□□ -1.52
SLC28A1O00337 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
SLC28A1O00337 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
SLC28A1O00337 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SLC28A1O00337 RN7SKP250-201ENST00000363924 321 ntBASIC5.58□□□□□ -1.52
SLC28A1O00337 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC5.58□□□□□ -1.52
SLC28A1O00337 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC5.58□□□□□ -1.52
SLC28A1O00337 OR10T1P-201ENST00000424327 947 ntBASIC5.58□□□□□ -1.52
SLC28A1O00337 AL139158.1-201ENST00000424719 340 ntBASIC5.58□□□□□ -1.52
SLC28A1O00337 AL133268.4-201ENST00000424868 472 ntTSL 3 BASIC5.58□□□□□ -1.52
SLC28A1O00337 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC5.58□□□□□ -1.52
SLC28A1O00337 BX276092.6-201ENST00000430476 250 ntBASIC5.58□□□□□ -1.52
SLC28A1O00337 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms