Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 MIR3176-201ENST00000582210 90 ntBASIC7.68□□□□□ -1.18
NPC1L1Q9UHC9 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC7.68□□□□□ -1.18
NPC1L1Q9UHC9 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
NPC1L1Q9UHC9 AC093388.1-201ENST00000609166 430 ntBASIC7.68□□□□□ -1.18
NPC1L1Q9UHC9 AC015712.7-201ENST00000615211 635 ntBASIC7.68□□□□□ -1.18
NPC1L1Q9UHC9 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC7.68□□□□□ -1.18
NPC1L1Q9UHC9 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC7.68□□□□□ -1.18
NPC1L1Q9UHC9 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
NPC1L1Q9UHC9 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
NPC1L1Q9UHC9 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
NPC1L1Q9UHC9 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC7.67□□□□□ -1.18
NPC1L1Q9UHC9 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
NPC1L1Q9UHC9 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC7.67□□□□□ -1.18
NPC1L1Q9UHC9 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
NPC1L1Q9UHC9 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC7.67□□□□□ -1.18
NPC1L1Q9UHC9 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC7.67□□□□□ -1.18
NPC1L1Q9UHC9 AC007161.1-204ENST00000423039 460 ntBASIC7.67□□□□□ -1.18
NPC1L1Q9UHC9 OR10T1P-201ENST00000424327 947 ntBASIC7.67□□□□□ -1.18
NPC1L1Q9UHC9 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
NPC1L1Q9UHC9 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC7.67□□□□□ -1.18
NPC1L1Q9UHC9 NANOGP9-201ENST00000439890 892 ntBASIC7.67□□□□□ -1.18
NPC1L1Q9UHC9 KRTAP8-2P-201ENST00000440620 186 ntBASIC7.67□□□□□ -1.18
NPC1L1Q9UHC9 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC7.67□□□□□ -1.18
NPC1L1Q9UHC9 RPS23P9-201ENST00000448848 438 ntBASIC7.67□□□□□ -1.18
NPC1L1Q9UHC9 VDAC2P4-201ENST00000452925 711 ntBASIC7.67□□□□□ -1.18
NPC1L1Q9UHC9 MEMO1P4-201ENST00000453590 386 ntBASIC7.67□□□□□ -1.18
NPC1L1Q9UHC9 AC008638.1-201ENST00000506035 866 ntBASIC7.67□□□□□ -1.18
NPC1L1Q9UHC9 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC7.67□□□□□ -1.18
NPC1L1Q9UHC9 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC7.67□□□□□ -1.18
NPC1L1Q9UHC9 MIR1273E-201ENST00000581165 102 ntBASIC7.67□□□□□ -1.18
NPC1L1Q9UHC9 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC7.67□□□□□ -1.18
NPC1L1Q9UHC9 AC009237.13-201ENST00000603193 276 ntBASIC7.67□□□□□ -1.18
NPC1L1Q9UHC9 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC7.67□□□□□ -1.18
NPC1L1Q9UHC9 AL049767.1-202ENST00000637826 242 ntBASIC7.67□□□□□ -1.18
NPC1L1Q9UHC9 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
NPC1L1Q9UHC9 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC7.67□□□□□ -1.18
NPC1L1Q9UHC9 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC7.67□□□□□ -1.18
NPC1L1Q9UHC9 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC7.67□□□□□ -1.18
NPC1L1Q9UHC9 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
NPC1L1Q9UHC9 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
NPC1L1Q9UHC9 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC7.67□□□□□ -1.18
NPC1L1Q9UHC9 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC7.67□□□□□ -1.18
NPC1L1Q9UHC9 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
NPC1L1Q9UHC9 MDM4-215ENST00000614459 9782 ntTSL 5 BASIC7.67□□□□□ -1.18
NPC1L1Q9UHC9 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC7.67□□□□□ -1.18
NPC1L1Q9UHC9 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC7.66□□□□□ -1.18
NPC1L1Q9UHC9 MAPK10-338ENST00000641647 3362 ntBASIC7.66□□□□□ -1.18
NPC1L1Q9UHC9 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC7.66□□□□□ -1.18
NPC1L1Q9UHC9 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC7.66□□□□□ -1.18
NPC1L1Q9UHC9 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC7.66□□□□□ -1.18
NPC1L1Q9UHC9 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
NPC1L1Q9UHC9 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC7.66□□□□□ -1.18
NPC1L1Q9UHC9 MEF2C-201ENST00000340208 6192 ntAPPRIS ALT1 TSL 1 (best) BASIC7.66□□□□□ -1.18
NPC1L1Q9UHC9 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
NPC1L1Q9UHC9 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC7.66□□□□□ -1.18
NPC1L1Q9UHC9 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC7.66□□□□□ -1.18
NPC1L1Q9UHC9 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
NPC1L1Q9UHC9 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
NPC1L1Q9UHC9 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
NPC1L1Q9UHC9 RNA5SP326-201ENST00000363209 110 ntBASIC7.66□□□□□ -1.18
NPC1L1Q9UHC9 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC7.66□□□□□ -1.18
NPC1L1Q9UHC9 ZSCAN12P1-201ENST00000406489 419 ntBASIC7.66□□□□□ -1.18
NPC1L1Q9UHC9 RPS6P23-201ENST00000413224 722 ntBASIC7.66□□□□□ -1.18
NPC1L1Q9UHC9 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC7.66□□□□□ -1.18
NPC1L1Q9UHC9 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC7.66□□□□□ -1.18
NPC1L1Q9UHC9 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC7.66□□□□□ -1.18
NPC1L1Q9UHC9 AC021876.1-201ENST00000425959 359 ntBASIC7.66□□□□□ -1.18
NPC1L1Q9UHC9 snoU13.29-201ENST00000459370 104 ntBASIC7.66□□□□□ -1.18
NPC1L1Q9UHC9 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC7.66□□□□□ -1.18
NPC1L1Q9UHC9 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC7.66□□□□□ -1.18
NPC1L1Q9UHC9 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC7.66□□□□□ -1.18
NPC1L1Q9UHC9 SNORD95-201ENST00000579879 68 ntBASIC7.66□□□□□ -1.18
NPC1L1Q9UHC9 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC7.66□□□□□ -1.18
NPC1L1Q9UHC9 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC7.66□□□□□ -1.18
NPC1L1Q9UHC9 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC7.66□□□□□ -1.18
NPC1L1Q9UHC9 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
NPC1L1Q9UHC9 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC7.66□□□□□ -1.18
NPC1L1Q9UHC9 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC7.66□□□□□ -1.18
NPC1L1Q9UHC9 ARID5B-201ENST00000279873 7891 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
NPC1L1Q9UHC9 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
NPC1L1Q9UHC9 AP002833.3-201ENST00000625075 2265 ntBASIC7.65□□□□□ -1.18
NPC1L1Q9UHC9 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
NPC1L1Q9UHC9 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
NPC1L1Q9UHC9 AL121886.1-201ENST00000358609 435 ntBASIC7.65□□□□□ -1.18
NPC1L1Q9UHC9 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC7.65□□□□□ -1.18
NPC1L1Q9UHC9 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
NPC1L1Q9UHC9 EIF4A1P7-201ENST00000421800 1220 ntBASIC7.65□□□□□ -1.18
NPC1L1Q9UHC9 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
NPC1L1Q9UHC9 OR6D1P-201ENST00000436165 939 ntBASIC7.65□□□□□ -1.18
NPC1L1Q9UHC9 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC7.65□□□□□ -1.18
NPC1L1Q9UHC9 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC7.65□□□□□ -1.18
NPC1L1Q9UHC9 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC7.65□□□□□ -1.18
NPC1L1Q9UHC9 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC7.65□□□□□ -1.18
NPC1L1Q9UHC9 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC7.65□□□□□ -1.18
NPC1L1Q9UHC9 AC104695.2-201ENST00000605056 775 ntBASIC7.65□□□□□ -1.18
NPC1L1Q9UHC9 AC004477.3-201ENST00000614061 590 ntBASIC7.65□□□□□ -1.18
NPC1L1Q9UHC9 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
NPC1L1Q9UHC9 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC7.65□□□□□ -1.18
NPC1L1Q9UHC9 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
NPC1L1Q9UHC9 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC7.65□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms