Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 KIAA0040-202ENST00000444639 4494 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
SHKBP1Q8TBC3 RPS4XP5-202ENST00000449995 1334 ntBASIC7.27□□□□□ -1.25
SHKBP1Q8TBC3 SORBS1-202ENST00000306402 5858 ntAPPRIS ALT2 TSL 1 (best) BASIC7.26□□□□□ -1.25
SHKBP1Q8TBC3 ERRFI1-202ENST00000467067 2097 ntTSL 2 BASIC7.26□□□□□ -1.25
SHKBP1Q8TBC3 TNPO1-204ENST00000506351 3028 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
SHKBP1Q8TBC3 UTY-213ENST00000612274 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC7.26□□□□□ -1.25
SHKBP1Q8TBC3 PSG6-201ENST00000187910 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC7.26□□□□□ -1.25
SHKBP1Q8TBC3 FBXL17-203ENST00000496714 3773 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
SHKBP1Q8TBC3 NCLP2-201ENST00000416078 1462 ntBASIC7.26□□□□□ -1.25
SHKBP1Q8TBC3 C1D-202ENST00000407324 1379 ntTSL 3 BASIC7.26□□□□□ -1.25
SHKBP1Q8TBC3 EPHA3-203ENST00000494014 3085 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
SHKBP1Q8TBC3 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
SHKBP1Q8TBC3 IMPA1-202ENST00000311489 1106 ntTSL 2 BASIC7.26□□□□□ -1.25
SHKBP1Q8TBC3 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
SHKBP1Q8TBC3 PRR9-201ENST00000368744 1229 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
SHKBP1Q8TBC3 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC7.26□□□□□ -1.25
SHKBP1Q8TBC3 FABP3-201ENST00000373713 725 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
SHKBP1Q8TBC3 PFKFB1-201ENST00000374992 1156 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
SHKBP1Q8TBC3 AL050335.1-201ENST00000396909 869 ntBASIC7.26□□□□□ -1.25
SHKBP1Q8TBC3 AL590084.2-201ENST00000401481 382 ntBASIC7.26□□□□□ -1.25
SHKBP1Q8TBC3 AGR3-202ENST00000402239 563 ntTSL 2 BASIC7.26□□□□□ -1.25
SHKBP1Q8TBC3 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC7.26□□□□□ -1.25
SHKBP1Q8TBC3 HMGN1P14-201ENST00000412459 517 ntBASIC7.26□□□□□ -1.25
SHKBP1Q8TBC3 MTCYBP38-201ENST00000417160 1123 ntBASIC7.26□□□□□ -1.25
SHKBP1Q8TBC3 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
SHKBP1Q8TBC3 RPL24P2-201ENST00000421023 475 ntBASIC7.26□□□□□ -1.25
SHKBP1Q8TBC3 MTCO2P34-201ENST00000421994 607 ntBASIC7.26□□□□□ -1.25
SHKBP1Q8TBC3 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC7.26□□□□□ -1.25
SHKBP1Q8TBC3 AC008753.1-201ENST00000423096 284 ntBASIC7.26□□□□□ -1.25
SHKBP1Q8TBC3 AC012519.1-201ENST00000424588 610 ntBASIC7.26□□□□□ -1.25
SHKBP1Q8TBC3 RNF19BPX-201ENST00000426224 625 ntBASIC7.26□□□□□ -1.25
SHKBP1Q8TBC3 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC7.26□□□□□ -1.25
SHKBP1Q8TBC3 MTND1P2-201ENST00000430604 821 ntBASIC7.26□□□□□ -1.25
SHKBP1Q8TBC3 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC7.26□□□□□ -1.25
SHKBP1Q8TBC3 AL035443.1-202ENST00000442841 586 ntTSL 2 BASIC7.26□□□□□ -1.25
SHKBP1Q8TBC3 TPT1P14-201ENST00000448018 505 ntBASIC7.26□□□□□ -1.25
SHKBP1Q8TBC3 PRDX1P1-201ENST00000449329 596 ntBASIC7.26□□□□□ -1.25
SHKBP1Q8TBC3 AL445991.1-201ENST00000450381 475 ntBASIC7.26□□□□□ -1.25
SHKBP1Q8TBC3 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC7.26□□□□□ -1.25
SHKBP1Q8TBC3 OR9A1P-202ENST00000484361 945 ntBASIC7.26□□□□□ -1.25
SHKBP1Q8TBC3 AC073842.2-201ENST00000494221 572 ntTSL 4 BASIC7.26□□□□□ -1.25
SHKBP1Q8TBC3 RN7SL649P-201ENST00000496974 275 ntBASIC7.26□□□□□ -1.25
SHKBP1Q8TBC3 AC093890.1-201ENST00000502554 540 ntBASIC7.26□□□□□ -1.25
SHKBP1Q8TBC3 MTCO1P31-201ENST00000506355 492 ntBASIC7.26□□□□□ -1.25
SHKBP1Q8TBC3 AC026782.2-201ENST00000510845 636 ntBASIC7.26□□□□□ -1.25
SHKBP1Q8TBC3 AC092674.1-201ENST00000513871 571 ntTSL 4 BASIC7.26□□□□□ -1.25
SHKBP1Q8TBC3 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC7.26□□□□□ -1.25
SHKBP1Q8TBC3 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC7.26□□□□□ -1.25
SHKBP1Q8TBC3 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC7.26□□□□□ -1.25
SHKBP1Q8TBC3 AP002963.1-201ENST00000530590 184 ntBASIC7.26□□□□□ -1.25
SHKBP1Q8TBC3 OR5AM1P-201ENST00000532136 1032 ntBASIC7.26□□□□□ -1.25
SHKBP1Q8TBC3 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC7.26□□□□□ -1.25
SHKBP1Q8TBC3 AC007537.1-201ENST00000539347 327 ntBASIC7.26□□□□□ -1.25
SHKBP1Q8TBC3 LINC02384-207ENST00000542875 551 ntTSL 4 BASIC7.26□□□□□ -1.25
SHKBP1Q8TBC3 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC7.26□□□□□ -1.25
SHKBP1Q8TBC3 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC7.26□□□□□ -1.25
SHKBP1Q8TBC3 AC245505.1-201ENST00000556398 224 ntBASIC7.26□□□□□ -1.25
SHKBP1Q8TBC3 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC7.26□□□□□ -1.25
SHKBP1Q8TBC3 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC7.26□□□□□ -1.25
SHKBP1Q8TBC3 AC092325.1-201ENST00000566449 554 ntBASIC7.26□□□□□ -1.25
SHKBP1Q8TBC3 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC7.26□□□□□ -1.25
SHKBP1Q8TBC3 AC233699.1-201ENST00000569955 1168 ntBASIC7.26□□□□□ -1.25
SHKBP1Q8TBC3 ACTG1P15-201ENST00000570019 1063 ntBASIC7.26□□□□□ -1.25
SHKBP1Q8TBC3 AC010327.4-201ENST00000585911 857 ntTSL 2 BASIC7.26□□□□□ -1.25
SHKBP1Q8TBC3 LSM1P2-201ENST00000604911 322 ntBASIC7.26□□□□□ -1.25
SHKBP1Q8TBC3 AC019257.2-201ENST00000605539 497 ntBASIC7.26□□□□□ -1.25
SHKBP1Q8TBC3 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC7.26□□□□□ -1.25
SHKBP1Q8TBC3 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC7.26□□□□□ -1.25
SHKBP1Q8TBC3 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC7.26□□□□□ -1.25
SHKBP1Q8TBC3 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
SHKBP1Q8TBC3 LINC01141-204ENST00000635564 1008 ntTSL 5 BASIC7.26□□□□□ -1.25
SHKBP1Q8TBC3 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
SHKBP1Q8TBC3 NAA15-208ENST00000515576 2456 ntTSL 2 BASIC7.26□□□□□ -1.25
SHKBP1Q8TBC3 MED6-212ENST00000615788 1700 ntTSL 5 BASIC7.26□□□□□ -1.25
SHKBP1Q8TBC3 USP9X-201ENST00000324545 12401 ntTSL 5 BASIC7.26□□□□□ -1.25
SHKBP1Q8TBC3 FGF9-201ENST00000382353 4220 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
SHKBP1Q8TBC3 PIK3CB-208ENST00000477593 4658 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
SHKBP1Q8TBC3 CFI-201ENST00000394634 2159 ntAPPRIS P3 TSL 1 (best) BASIC7.26□□□□□ -1.25
SHKBP1Q8TBC3 PPP3R2-201ENST00000374806 3387 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
SHKBP1Q8TBC3 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC7.26□□□□□ -1.25
SHKBP1Q8TBC3 AL031651.1-201ENST00000615357 1438 ntBASIC7.26□□□□□ -1.25
SHKBP1Q8TBC3 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC7.26□□□□□ -1.25
SHKBP1Q8TBC3 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
SHKBP1Q8TBC3 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC7.26□□□□□ -1.25
SHKBP1Q8TBC3 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC7.26□□□□□ -1.25
SHKBP1Q8TBC3 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC7.25□□□□□ -1.25
SHKBP1Q8TBC3 NARS2-204ENST00000528850 2137 ntTSL 5 BASIC7.25□□□□□ -1.25
SHKBP1Q8TBC3 SLC12A6-201ENST00000290209 7286 ntAPPRIS P3 TSL 1 (best) BASIC7.25□□□□□ -1.25
SHKBP1Q8TBC3 CYB5B-201ENST00000307892 4286 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
SHKBP1Q8TBC3 LPAL2-203ENST00000454031 2498 ntBASIC7.25□□□□□ -1.25
SHKBP1Q8TBC3 OR4C1P-202ENST00000641065 1569 ntBASIC7.25□□□□□ -1.25
SHKBP1Q8TBC3 BTRC-204ENST00000408038 5982 ntAPPRIS ALT1 TSL 1 (best) BASIC7.25□□□□□ -1.25
SHKBP1Q8TBC3 ZNF300-204ENST00000427179 4155 ntTSL 2 BASIC7.25□□□□□ -1.25
SHKBP1Q8TBC3 KAT14-202ENST00000435364 3618 ntAPPRIS P2 TSL 1 (best) BASIC7.25□□□□□ -1.25
SHKBP1Q8TBC3 TMEM217-202ENST00000356757 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC7.25□□□□□ -1.25
SHKBP1Q8TBC3 MBD5-201ENST00000404807 5920 ntTSL 5 BASIC7.25□□□□□ -1.25
SHKBP1Q8TBC3 YOD1-202ENST00000367084 6291 ntTSL 2 BASIC7.25□□□□□ -1.25
SHKBP1Q8TBC3 ADAMTS9-201ENST00000295903 7060 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
SHKBP1Q8TBC3 ARHGAP20-205ENST00000529591 2623 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
SHKBP1Q8TBC3 LINC01128-205ENST00000445118 6606 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms