Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC5.58□□□□□ -1.52
CLHC1Q8NHS4 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC5.58□□□□□ -1.52
CLHC1Q8NHS4 SRP14-AS1-203ENST00000560341 669 ntTSL 2 BASIC5.58□□□□□ -1.52
CLHC1Q8NHS4 AC145285.4-201ENST00000568183 540 ntTSL 3 BASIC5.58□□□□□ -1.52
CLHC1Q8NHS4 RN7SL230P-201ENST00000580835 303 ntBASIC5.58□□□□□ -1.52
CLHC1Q8NHS4 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC5.58□□□□□ -1.52
CLHC1Q8NHS4 AC006115.2-201ENST00000596823 202 ntBASIC5.58□□□□□ -1.52
CLHC1Q8NHS4 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
CLHC1Q8NHS4 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC5.58□□□□□ -1.52
CLHC1Q8NHS4 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
CLHC1Q8NHS4 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CLHC1Q8NHS4 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.58□□□□□ -1.52
CLHC1Q8NHS4 AL031595.2-201ENST00000624215 19071 ntBASIC5.58□□□□□ -1.52
CLHC1Q8NHS4 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC5.58□□□□□ -1.52
CLHC1Q8NHS4 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
CLHC1Q8NHS4 AC093849.1-201ENST00000563631 2209 ntBASIC5.58□□□□□ -1.52
CLHC1Q8NHS4 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CLHC1Q8NHS4 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CLHC1Q8NHS4 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CLHC1Q8NHS4 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
CLHC1Q8NHS4 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
CLHC1Q8NHS4 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CLHC1Q8NHS4 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CLHC1Q8NHS4 H3F3A-201ENST00000366813 1308 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CLHC1Q8NHS4 DYNC2LI1-210ENST00000605786 1346 ntAPPRIS ALT1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CLHC1Q8NHS4 AC010266.2-201ENST00000564741 3255 ntBASIC5.57□□□□□ -1.52
CLHC1Q8NHS4 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC5.57□□□□□ -1.52
CLHC1Q8NHS4 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CLHC1Q8NHS4 RN7SKP184-201ENST00000362348 333 ntBASIC5.57□□□□□ -1.52
CLHC1Q8NHS4 RNA5SP232-201ENST00000364144 119 ntBASIC5.57□□□□□ -1.52
CLHC1Q8NHS4 RNA5SP91-201ENST00000390902 119 ntBASIC5.57□□□□□ -1.52
CLHC1Q8NHS4 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC5.57□□□□□ -1.52
CLHC1Q8NHS4 AL096711.1-201ENST00000404780 554 ntBASIC5.57□□□□□ -1.52
CLHC1Q8NHS4 AC002524.1-201ENST00000411687 547 ntBASIC5.57□□□□□ -1.52
CLHC1Q8NHS4 AL354868.1-201ENST00000417077 482 ntBASIC5.57□□□□□ -1.52
CLHC1Q8NHS4 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC5.57□□□□□ -1.52
CLHC1Q8NHS4 BMS1P10-201ENST00000443754 1120 ntBASIC5.57□□□□□ -1.52
CLHC1Q8NHS4 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC5.57□□□□□ -1.52
CLHC1Q8NHS4 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC5.57□□□□□ -1.52
CLHC1Q8NHS4 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC5.57□□□□□ -1.52
CLHC1Q8NHS4 AC098847.1-201ENST00000473094 348 ntBASIC5.57□□□□□ -1.52
CLHC1Q8NHS4 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC5.57□□□□□ -1.52
CLHC1Q8NHS4 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC5.57□□□□□ -1.52
CLHC1Q8NHS4 AC097486.1-201ENST00000515331 210 ntBASIC5.57□□□□□ -1.52
CLHC1Q8NHS4 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC5.57□□□□□ -1.52
CLHC1Q8NHS4 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC5.57□□□□□ -1.52
CLHC1Q8NHS4 AC136777.2-201ENST00000522979 358 ntBASIC5.57□□□□□ -1.52
CLHC1Q8NHS4 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC5.57□□□□□ -1.52
CLHC1Q8NHS4 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC5.57□□□□□ -1.52
CLHC1Q8NHS4 OR4A41P-201ENST00000533053 928 ntBASIC5.57□□□□□ -1.52
CLHC1Q8NHS4 AC121758.1-202ENST00000556917 658 ntBASIC5.57□□□□□ -1.52
CLHC1Q8NHS4 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC5.57□□□□□ -1.52
CLHC1Q8NHS4 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
CLHC1Q8NHS4 OR1E3-201ENST00000575608 948 ntBASIC5.57□□□□□ -1.52
CLHC1Q8NHS4 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC5.57□□□□□ -1.52
CLHC1Q8NHS4 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC5.57□□□□□ -1.52
CLHC1Q8NHS4 AL136228.1-201ENST00000622221 319 ntBASIC5.57□□□□□ -1.52
CLHC1Q8NHS4 AL022311.1-201ENST00000623726 19416 ntBASIC5.57□□□□□ -1.52
CLHC1Q8NHS4 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.57□□□□□ -1.52
CLHC1Q8NHS4 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
CLHC1Q8NHS4 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CLHC1Q8NHS4 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CLHC1Q8NHS4 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CLHC1Q8NHS4 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC5.57□□□□□ -1.52
CLHC1Q8NHS4 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CLHC1Q8NHS4 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
CLHC1Q8NHS4 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
CLHC1Q8NHS4 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CLHC1Q8NHS4 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
CLHC1Q8NHS4 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CLHC1Q8NHS4 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CLHC1Q8NHS4 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
CLHC1Q8NHS4 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
CLHC1Q8NHS4 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CLHC1Q8NHS4 AC109446.4-201ENST00000623235 2755 ntBASIC5.56□□□□□ -1.52
CLHC1Q8NHS4 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
CLHC1Q8NHS4 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC5.56□□□□□ -1.52
CLHC1Q8NHS4 SAMM50P1-201ENST00000455403 1399 ntBASIC5.56□□□□□ -1.52
CLHC1Q8NHS4 BCORP1-203ENST00000513194 5093 ntBASIC5.56□□□□□ -1.52
CLHC1Q8NHS4 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CLHC1Q8NHS4 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CLHC1Q8NHS4 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
CLHC1Q8NHS4 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CLHC1Q8NHS4 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CLHC1Q8NHS4 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CLHC1Q8NHS4 SNORA51.9-201ENST00000384295 124 ntBASIC5.56□□□□□ -1.52
CLHC1Q8NHS4 RBBP4P5-201ENST00000398583 1266 ntBASIC5.56□□□□□ -1.52
CLHC1Q8NHS4 RNU2-22P-201ENST00000411266 212 ntBASIC5.56□□□□□ -1.52
CLHC1Q8NHS4 AL354890.1-201ENST00000413730 346 ntBASIC5.56□□□□□ -1.52
CLHC1Q8NHS4 AC234781.4-201ENST00000419384 244 ntBASIC5.56□□□□□ -1.52
CLHC1Q8NHS4 AC009506.2-201ENST00000420635 840 ntBASIC5.56□□□□□ -1.52
CLHC1Q8NHS4 KIF4CP-201ENST00000422742 1279 ntBASIC5.56□□□□□ -1.52
CLHC1Q8NHS4 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC5.56□□□□□ -1.52
CLHC1Q8NHS4 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC5.56□□□□□ -1.52
CLHC1Q8NHS4 AC007383.1-201ENST00000445875 636 ntBASIC5.56□□□□□ -1.52
CLHC1Q8NHS4 AC073072.2-201ENST00000447425 348 ntBASIC5.56□□□□□ -1.52
CLHC1Q8NHS4 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC5.56□□□□□ -1.52
CLHC1Q8NHS4 RNU1-88P-201ENST00000459274 128 ntBASIC5.56□□□□□ -1.52
CLHC1Q8NHS4 AC090602.1-201ENST00000469695 252 ntBASIC5.56□□□□□ -1.52
CLHC1Q8NHS4 RN7SL568P-201ENST00000493069 298 ntBASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 138.4 ms