Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
C9orf40Q8IXQ3 AC015689.2-201ENST00000528172 1738 ntBASIC5.37□□□□□ -1.55
C9orf40Q8IXQ3 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC5.37□□□□□ -1.55
C9orf40Q8IXQ3 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
C9orf40Q8IXQ3 NCOA4P2-201ENST00000340589 1813 ntBASIC5.37□□□□□ -1.55
C9orf40Q8IXQ3 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
C9orf40Q8IXQ3 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
C9orf40Q8IXQ3 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC5.36□□□□□ -1.55
C9orf40Q8IXQ3 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
C9orf40Q8IXQ3 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC5.36□□□□□ -1.55
C9orf40Q8IXQ3 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
C9orf40Q8IXQ3 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.36□□□□□ -1.55
C9orf40Q8IXQ3 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
C9orf40Q8IXQ3 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
C9orf40Q8IXQ3 AL121977.1-201ENST00000401636 979 ntBASIC5.36□□□□□ -1.55
C9orf40Q8IXQ3 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.36□□□□□ -1.55
C9orf40Q8IXQ3 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC5.36□□□□□ -1.55
C9orf40Q8IXQ3 EEF1B2P8-201ENST00000414101 671 ntBASIC5.36□□□□□ -1.55
C9orf40Q8IXQ3 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC5.36□□□□□ -1.55
C9orf40Q8IXQ3 AC019205.1-201ENST00000421830 730 ntBASIC5.36□□□□□ -1.55
C9orf40Q8IXQ3 OR5W1P-201ENST00000423705 938 ntBASIC5.36□□□□□ -1.55
C9orf40Q8IXQ3 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC5.36□□□□□ -1.55
C9orf40Q8IXQ3 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC5.36□□□□□ -1.55
C9orf40Q8IXQ3 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC5.36□□□□□ -1.55
C9orf40Q8IXQ3 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC5.36□□□□□ -1.55
C9orf40Q8IXQ3 RPS23P6-201ENST00000466136 431 ntBASIC5.36□□□□□ -1.55
C9orf40Q8IXQ3 AC105384.2-201ENST00000508433 640 ntBASIC5.36□□□□□ -1.55
C9orf40Q8IXQ3 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.36□□□□□ -1.55
C9orf40Q8IXQ3 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC5.36□□□□□ -1.55
C9orf40Q8IXQ3 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC5.36□□□□□ -1.55
C9orf40Q8IXQ3 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC5.36□□□□□ -1.55
C9orf40Q8IXQ3 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.36□□□□□ -1.55
C9orf40Q8IXQ3 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC5.36□□□□□ -1.55
C9orf40Q8IXQ3 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC5.36□□□□□ -1.55
C9orf40Q8IXQ3 AC006115.2-201ENST00000596823 202 ntBASIC5.36□□□□□ -1.55
C9orf40Q8IXQ3 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC5.36□□□□□ -1.55
C9orf40Q8IXQ3 AL161912.3-201ENST00000605404 628 ntBASIC5.36□□□□□ -1.55
C9orf40Q8IXQ3 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC5.36□□□□□ -1.55
C9orf40Q8IXQ3 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
C9orf40Q8IXQ3 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC5.36□□□□□ -1.55
C9orf40Q8IXQ3 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
C9orf40Q8IXQ3 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
C9orf40Q8IXQ3 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
C9orf40Q8IXQ3 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
C9orf40Q8IXQ3 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
C9orf40Q8IXQ3 AP002833.3-201ENST00000625075 2265 ntBASIC5.36□□□□□ -1.55
C9orf40Q8IXQ3 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC5.36□□□□□ -1.55
C9orf40Q8IXQ3 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
C9orf40Q8IXQ3 NLN-202ENST00000502464 8354 ntTSL 5 BASIC5.36□□□□□ -1.55
C9orf40Q8IXQ3 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
C9orf40Q8IXQ3 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
C9orf40Q8IXQ3 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
C9orf40Q8IXQ3 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
C9orf40Q8IXQ3 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
C9orf40Q8IXQ3 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
C9orf40Q8IXQ3 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.35□□□□□ -1.55
C9orf40Q8IXQ3 AC092070.2-203ENST00000598377 3644 ntBASIC5.35□□□□□ -1.55
C9orf40Q8IXQ3 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.35□□□□□ -1.55
C9orf40Q8IXQ3 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
C9orf40Q8IXQ3 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC5.35□□□□□ -1.55
C9orf40Q8IXQ3 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
C9orf40Q8IXQ3 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
C9orf40Q8IXQ3 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
C9orf40Q8IXQ3 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
C9orf40Q8IXQ3 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC5.35□□□□□ -1.55
C9orf40Q8IXQ3 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC5.35□□□□□ -1.55
C9orf40Q8IXQ3 AC117409.1-201ENST00000470499 1310 ntBASIC5.35□□□□□ -1.55
C9orf40Q8IXQ3 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
C9orf40Q8IXQ3 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
C9orf40Q8IXQ3 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
C9orf40Q8IXQ3 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC5.35□□□□□ -1.55
C9orf40Q8IXQ3 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC5.35□□□□□ -1.55
C9orf40Q8IXQ3 AL389925.1-201ENST00000432257 728 ntBASIC5.35□□□□□ -1.55
C9orf40Q8IXQ3 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC5.35□□□□□ -1.55
C9orf40Q8IXQ3 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC5.35□□□□□ -1.55
C9orf40Q8IXQ3 RPSAP37-201ENST00000470913 821 ntBASIC5.35□□□□□ -1.55
C9orf40Q8IXQ3 AC022215.1-201ENST00000481770 362 ntBASIC5.35□□□□□ -1.55
C9orf40Q8IXQ3 RPL32P33-201ENST00000487023 394 ntBASIC5.35□□□□□ -1.55
C9orf40Q8IXQ3 AC009120.1-201ENST00000493458 473 ntBASIC5.35□□□□□ -1.55
C9orf40Q8IXQ3 AC090058.1-201ENST00000498788 435 ntBASIC5.35□□□□□ -1.55
C9orf40Q8IXQ3 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC5.35□□□□□ -1.55
C9orf40Q8IXQ3 SCARNA6.1-201ENST00000516989 238 ntBASIC5.35□□□□□ -1.55
C9orf40Q8IXQ3 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC5.35□□□□□ -1.55
C9orf40Q8IXQ3 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC5.35□□□□□ -1.55
C9orf40Q8IXQ3 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
C9orf40Q8IXQ3 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC5.35□□□□□ -1.55
C9orf40Q8IXQ3 DPPA3P2-202ENST00000557188 1219 ntBASIC5.35□□□□□ -1.55
C9orf40Q8IXQ3 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC5.35□□□□□ -1.55
C9orf40Q8IXQ3 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC5.35□□□□□ -1.55
C9orf40Q8IXQ3 MIR3614-201ENST00000581261 86 ntBASIC5.35□□□□□ -1.55
C9orf40Q8IXQ3 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC5.35□□□□□ -1.55
C9orf40Q8IXQ3 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC5.35□□□□□ -1.55
C9orf40Q8IXQ3 RN7SL544P-201ENST00000617232 284 ntBASIC5.35□□□□□ -1.55
C9orf40Q8IXQ3 RN7SL763P-201ENST00000620922 284 ntBASIC5.35□□□□□ -1.55
C9orf40Q8IXQ3 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC5.35□□□□□ -1.55
C9orf40Q8IXQ3 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
C9orf40Q8IXQ3 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
C9orf40Q8IXQ3 OR13C1P-202ENST00000641378 2919 ntBASIC5.35□□□□□ -1.55
C9orf40Q8IXQ3 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
C9orf40Q8IXQ3 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 111.4 ms