Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 MIR375-201ENST00000362103 64 ntBASIC5.81□□□□□ -1.48
CDK3Q00526 RNA5SP435-201ENST00000364044 108 ntBASIC5.81□□□□□ -1.48
CDK3Q00526 PPCS-201ENST00000372556 984 ntTSL 2 BASIC5.81□□□□□ -1.48
CDK3Q00526 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC5.81□□□□□ -1.48
CDK3Q00526 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
CDK3Q00526 DHFRP5-201ENST00000406944 564 ntBASIC5.81□□□□□ -1.48
CDK3Q00526 RN7SKP29-201ENST00000410957 272 ntBASIC5.81□□□□□ -1.48
CDK3Q00526 CDY17P-201ENST00000414121 1282 ntBASIC5.81□□□□□ -1.48
CDK3Q00526 MRPL53P1-201ENST00000414323 319 ntBASIC5.81□□□□□ -1.48
CDK3Q00526 AK4P4-201ENST00000419465 646 ntBASIC5.81□□□□□ -1.48
CDK3Q00526 RPL12P43-201ENST00000420608 499 ntBASIC5.81□□□□□ -1.48
CDK3Q00526 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
CDK3Q00526 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC5.81□□□□□ -1.48
CDK3Q00526 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC5.81□□□□□ -1.48
CDK3Q00526 NDUFA5P8-201ENST00000449019 346 ntBASIC5.81□□□□□ -1.48
CDK3Q00526 RPL31P15-201ENST00000449770 338 ntBASIC5.81□□□□□ -1.48
CDK3Q00526 AL445687.2-201ENST00000458156 728 ntBASIC5.81□□□□□ -1.48
CDK3Q00526 AL603882.1-201ENST00000463059 681 ntBASIC5.81□□□□□ -1.48
CDK3Q00526 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC5.81□□□□□ -1.48
CDK3Q00526 AL355032.1-201ENST00000472981 438 ntBASIC5.81□□□□□ -1.48
CDK3Q00526 AC007688.1-201ENST00000475592 759 ntBASIC5.81□□□□□ -1.48
CDK3Q00526 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CDK3Q00526 RPL38P3-201ENST00000484463 213 ntBASIC5.81□□□□□ -1.48
CDK3Q00526 RPL7P51-201ENST00000490532 749 ntBASIC5.81□□□□□ -1.48
CDK3Q00526 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CDK3Q00526 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CDK3Q00526 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC5.81□□□□□ -1.48
CDK3Q00526 MTATP6P1-201ENST00000514057 681 ntBASIC5.81□□□□□ -1.48
CDK3Q00526 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC5.81□□□□□ -1.48
CDK3Q00526 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC5.81□□□□□ -1.48
CDK3Q00526 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC5.81□□□□□ -1.48
CDK3Q00526 GNG2-208ENST00000554875 430 ntTSL 5 BASIC5.81□□□□□ -1.48
CDK3Q00526 AL049779.3-201ENST00000557141 606 ntBASIC5.81□□□□□ -1.48
CDK3Q00526 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CDK3Q00526 AC127024.6-201ENST00000621598 424 ntBASIC5.81□□□□□ -1.48
CDK3Q00526 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.81□□□□□ -1.48
CDK3Q00526 AC103703.1-201ENST00000634783 663 ntBASIC5.81□□□□□ -1.48
CDK3Q00526 AC008691.1-209ENST00000642094 814 ntBASIC5.81□□□□□ -1.48
CDK3Q00526 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC5.81□□□□□ -1.48
CDK3Q00526 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CDK3Q00526 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC5.81□□□□□ -1.48
CDK3Q00526 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
CDK3Q00526 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC5.81□□□□□ -1.48
CDK3Q00526 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC5.81□□□□□ -1.48
CDK3Q00526 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC5.81□□□□□ -1.48
CDK3Q00526 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
CDK3Q00526 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC5.81□□□□□ -1.48
CDK3Q00526 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CDK3Q00526 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
CDK3Q00526 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CDK3Q00526 SNX18P3-202ENST00000565670 1750 ntBASIC5.8□□□□□ -1.48
CDK3Q00526 AL078595.2-201ENST00000605309 1780 ntBASIC5.8□□□□□ -1.48
CDK3Q00526 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC5.8□□□□□ -1.48
CDK3Q00526 AC130304.1-201ENST00000622942 2385 ntBASIC5.8□□□□□ -1.48
CDK3Q00526 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC5.8□□□□□ -1.48
CDK3Q00526 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CDK3Q00526 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC5.8□□□□□ -1.48
CDK3Q00526 AC120036.2-201ENST00000509729 1474 ntBASIC5.8□□□□□ -1.48
CDK3Q00526 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CDK3Q00526 RN7SKP269-201ENST00000365545 319 ntBASIC5.8□□□□□ -1.48
CDK3Q00526 RNU4-64P-201ENST00000410795 131 ntBASIC5.8□□□□□ -1.48
CDK3Q00526 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC5.8□□□□□ -1.48
CDK3Q00526 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC5.8□□□□□ -1.48
CDK3Q00526 NAP1L4P2-201ENST00000425958 899 ntBASIC5.8□□□□□ -1.48
CDK3Q00526 DEFA9P-201ENST00000433042 285 ntBASIC5.8□□□□□ -1.48
CDK3Q00526 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC5.8□□□□□ -1.48
CDK3Q00526 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC5.8□□□□□ -1.48
CDK3Q00526 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC5.8□□□□□ -1.48
CDK3Q00526 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC5.8□□□□□ -1.48
CDK3Q00526 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC5.8□□□□□ -1.48
CDK3Q00526 SETP20-201ENST00000457046 852 ntBASIC5.8□□□□□ -1.48
CDK3Q00526 AL157777.1-201ENST00000468100 304 ntBASIC5.8□□□□□ -1.48
CDK3Q00526 PPIAP19-201ENST00000486414 492 ntBASIC5.8□□□□□ -1.48
CDK3Q00526 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC5.8□□□□□ -1.48
CDK3Q00526 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC5.8□□□□□ -1.48
CDK3Q00526 IGLVIV-64-201ENST00000518581 301 ntBASIC5.8□□□□□ -1.48
CDK3Q00526 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC5.8□□□□□ -1.48
CDK3Q00526 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC5.8□□□□□ -1.48
CDK3Q00526 MRO-208ENST00000588444 866 ntTSL 3 BASIC5.8□□□□□ -1.48
CDK3Q00526 AC245128.3-201ENST00000594721 748 ntBASIC5.8□□□□□ -1.48
CDK3Q00526 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC5.8□□□□□ -1.48
CDK3Q00526 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC5.8□□□□□ -1.48
CDK3Q00526 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC5.8□□□□□ -1.48
CDK3Q00526 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC5.8□□□□□ -1.48
CDK3Q00526 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
CDK3Q00526 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CDK3Q00526 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CDK3Q00526 AP000641.1-201ENST00000531988 1639 ntBASIC5.8□□□□□ -1.48
CDK3Q00526 KARSP1-201ENST00000451871 1752 ntBASIC5.8□□□□□ -1.48
CDK3Q00526 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC5.8□□□□□ -1.48
CDK3Q00526 AL132656.3-201ENST00000606384 1595 ntBASIC5.8□□□□□ -1.48
CDK3Q00526 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CDK3Q00526 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC5.79□□□□□ -1.48
CDK3Q00526 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CDK3Q00526 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CDK3Q00526 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC5.79□□□□□ -1.48
CDK3Q00526 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.48
CDK3Q00526 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CDK3Q00526 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CDK3Q00526 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms