Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC4.97□□□□□ -1.61
CX3CL1P78423 AL513321.1-201ENST00000441175 761 ntBASIC4.97□□□□□ -1.61
CX3CL1P78423 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
CX3CL1P78423 LINC01370-202ENST00000445606 731 ntTSL 5 BASIC4.97□□□□□ -1.61
CX3CL1P78423 AC103563.5-201ENST00000455643 364 ntBASIC4.97□□□□□ -1.61
CX3CL1P78423 RANP2-201ENST00000456833 229 ntBASIC4.97□□□□□ -1.61
CX3CL1P78423 AC019084.1-201ENST00000457337 432 ntBASIC4.97□□□□□ -1.61
CX3CL1P78423 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC4.97□□□□□ -1.61
CX3CL1P78423 RN7SL221P-201ENST00000466190 281 ntBASIC4.97□□□□□ -1.61
CX3CL1P78423 AC044810.1-201ENST00000480271 711 ntBASIC4.97□□□□□ -1.61
CX3CL1P78423 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CX3CL1P78423 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC4.97□□□□□ -1.61
CX3CL1P78423 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC4.97□□□□□ -1.61
CX3CL1P78423 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CX3CL1P78423 AC021087.2-201ENST00000504656 1203 ntBASIC4.97□□□□□ -1.61
CX3CL1P78423 OR4D12P-201ENST00000509361 911 ntBASIC4.97□□□□□ -1.61
CX3CL1P78423 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC4.97□□□□□ -1.61
CX3CL1P78423 RNA5SP206-201ENST00000516703 121 ntBASIC4.97□□□□□ -1.61
CX3CL1P78423 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC4.97□□□□□ -1.61
CX3CL1P78423 AC116917.1-201ENST00000520558 305 ntBASIC4.97□□□□□ -1.61
CX3CL1P78423 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC4.97□□□□□ -1.61
CX3CL1P78423 AP001000.1-201ENST00000526843 742 ntBASIC4.97□□□□□ -1.61
CX3CL1P78423 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC4.97□□□□□ -1.61
CX3CL1P78423 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC4.97□□□□□ -1.61
CX3CL1P78423 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC4.97□□□□□ -1.61
CX3CL1P78423 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC4.97□□□□□ -1.61
CX3CL1P78423 NOP56P3-201ENST00000549457 385 ntBASIC4.97□□□□□ -1.61
CX3CL1P78423 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC4.97□□□□□ -1.61
CX3CL1P78423 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC4.97□□□□□ -1.61
CX3CL1P78423 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC4.97□□□□□ -1.61
CX3CL1P78423 AC005632.2-201ENST00000564271 828 ntBASIC4.97□□□□□ -1.61
CX3CL1P78423 FAM106CP-201ENST00000582212 507 ntBASIC4.97□□□□□ -1.61
CX3CL1P78423 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC4.97□□□□□ -1.61
CX3CL1P78423 WBP1LP12-201ENST00000604449 331 ntBASIC4.97□□□□□ -1.61
CX3CL1P78423 AC004775.1-201ENST00000607389 753 ntBASIC4.97□□□□□ -1.61
CX3CL1P78423 OSTC-205ENST00000613215 876 ntTSL 2 BASIC4.97□□□□□ -1.61
CX3CL1P78423 OR8G7P-201ENST00000616658 848 ntBASIC4.97□□□□□ -1.61
CX3CL1P78423 REV3L-214ENST00000619481 969 ntTSL 5 BASIC4.97□□□□□ -1.61
CX3CL1P78423 UBA3-213ENST00000631029 123 ntTSL 5 BASIC4.97□□□□□ -1.61
CX3CL1P78423 AC099654.15-201ENST00000639802 509 ntBASIC4.97□□□□□ -1.61
CX3CL1P78423 AC010325.3-201ENST00000641084 394 ntBASIC4.97□□□□□ -1.61
CX3CL1P78423 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CX3CL1P78423 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CX3CL1P78423 NLN-202ENST00000502464 8354 ntTSL 5 BASIC4.97□□□□□ -1.61
CX3CL1P78423 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CX3CL1P78423 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
CX3CL1P78423 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
CX3CL1P78423 LINC02318-201ENST00000553785 1334 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CX3CL1P78423 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC4.96□□□□□ -1.61
CX3CL1P78423 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.61
CX3CL1P78423 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.61
CX3CL1P78423 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.61
CX3CL1P78423 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC4.96□□□□□ -1.61
CX3CL1P78423 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.61
CX3CL1P78423 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC4.96□□□□□ -1.61
CX3CL1P78423 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC4.96□□□□□ -1.62
CX3CL1P78423 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CX3CL1P78423 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CX3CL1P78423 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC4.96□□□□□ -1.62
CX3CL1P78423 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CX3CL1P78423 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC4.96□□□□□ -1.62
CX3CL1P78423 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC4.96□□□□□ -1.62
CX3CL1P78423 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CX3CL1P78423 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
CX3CL1P78423 AL121977.1-201ENST00000401636 979 ntBASIC4.96□□□□□ -1.62
CX3CL1P78423 AL353692.2-201ENST00000407054 335 ntBASIC4.96□□□□□ -1.62
CX3CL1P78423 PTGES3P2-201ENST00000407942 482 ntBASIC4.96□□□□□ -1.62
CX3CL1P78423 RN7SKP121-201ENST00000410842 305 ntBASIC4.96□□□□□ -1.62
CX3CL1P78423 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC4.96□□□□□ -1.62
CX3CL1P78423 MTCYBP7-201ENST00000419540 1134 ntBASIC4.96□□□□□ -1.62
CX3CL1P78423 FAM183DP-201ENST00000421987 399 ntBASIC4.96□□□□□ -1.62
CX3CL1P78423 RPS7P14-201ENST00000426405 583 ntBASIC4.96□□□□□ -1.62
CX3CL1P78423 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CX3CL1P78423 AC094019.1-201ENST00000434678 472 ntBASIC4.96□□□□□ -1.62
CX3CL1P78423 AL645936.1-201ENST00000441979 518 ntBASIC4.96□□□□□ -1.62
CX3CL1P78423 ZNF736P11Y-201ENST00000442535 1213 ntBASIC4.96□□□□□ -1.62
CX3CL1P78423 ZNF736P12Y-201ENST00000443152 1243 ntBASIC4.96□□□□□ -1.62
CX3CL1P78423 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
CX3CL1P78423 AC007383.1-201ENST00000445875 636 ntBASIC4.96□□□□□ -1.62
CX3CL1P78423 ZNF736P4Y-201ENST00000454995 1243 ntBASIC4.96□□□□□ -1.62
CX3CL1P78423 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC4.96□□□□□ -1.62
CX3CL1P78423 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC4.96□□□□□ -1.62
CX3CL1P78423 H3F3AP5-201ENST00000475267 429 ntBASIC4.96□□□□□ -1.62
CX3CL1P78423 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC4.96□□□□□ -1.62
CX3CL1P78423 AC015908.1-201ENST00000478739 476 ntBASIC4.96□□□□□ -1.62
CX3CL1P78423 RPL29P23-201ENST00000486188 442 ntBASIC4.96□□□□□ -1.62
CX3CL1P78423 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC4.96□□□□□ -1.62
CX3CL1P78423 RPL23AP73-201ENST00000492507 471 ntBASIC4.96□□□□□ -1.62
CX3CL1P78423 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC4.96□□□□□ -1.62
CX3CL1P78423 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC4.96□□□□□ -1.62
CX3CL1P78423 HMGN1P16-201ENST00000508308 283 ntBASIC4.96□□□□□ -1.62
CX3CL1P78423 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC4.96□□□□□ -1.62
CX3CL1P78423 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC4.96□□□□□ -1.62
CX3CL1P78423 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
CX3CL1P78423 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC4.96□□□□□ -1.62
CX3CL1P78423 AC092451.2-201ENST00000538746 658 ntBASIC4.96□□□□□ -1.62
CX3CL1P78423 AP000619.2-201ENST00000546014 969 ntBASIC4.96□□□□□ -1.62
CX3CL1P78423 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC4.96□□□□□ -1.62
CX3CL1P78423 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC4.96□□□□□ -1.62
CX3CL1P78423 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 143 ms