Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CKS1BP61024 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.14□□□□□ -1.75
CKS1BP61024 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
CKS1BP61024 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CKS1BP61024 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CKS1BP61024 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
CKS1BP61024 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC4.14□□□□□ -1.75
CKS1BP61024 ATP5J2-201ENST00000292475 607 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CKS1BP61024 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
CKS1BP61024 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CKS1BP61024 AC007068.1-201ENST00000396690 844 ntBASIC4.14□□□□□ -1.75
CKS1BP61024 RPS24P12-201ENST00000402084 394 ntBASIC4.14□□□□□ -1.75
CKS1BP61024 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC4.14□□□□□ -1.75
CKS1BP61024 RN7SKP205-201ENST00000410999 307 ntBASIC4.14□□□□□ -1.75
CKS1BP61024 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC4.14□□□□□ -1.75
CKS1BP61024 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC4.14□□□□□ -1.75
CKS1BP61024 AL161742.1-201ENST00000418154 584 ntBASIC4.14□□□□□ -1.75
CKS1BP61024 MED28P4-201ENST00000433137 572 ntBASIC4.14□□□□□ -1.75
CKS1BP61024 AL731534.1-201ENST00000434711 269 ntBASIC4.14□□□□□ -1.75
CKS1BP61024 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC4.14□□□□□ -1.75
CKS1BP61024 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC4.14□□□□□ -1.75
CKS1BP61024 MORF4-201ENST00000447135 971 ntBASIC4.14□□□□□ -1.75
CKS1BP61024 AC073072.2-201ENST00000447425 348 ntBASIC4.14□□□□□ -1.75
CKS1BP61024 LINC01961-201ENST00000449954 745 ntTSL 5 BASIC4.14□□□□□ -1.75
CKS1BP61024 CREM-220ENST00000463314 964 ntTSL 2 BASIC4.14□□□□□ -1.75
CKS1BP61024 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC4.14□□□□□ -1.75
CKS1BP61024 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC4.14□□□□□ -1.75
CKS1BP61024 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC4.14□□□□□ -1.75
CKS1BP61024 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CKS1BP61024 AC114956.3-202ENST00000505645 482 ntTSL 5 BASIC4.14□□□□□ -1.75
CKS1BP61024 AC139713.2-204ENST00000511042 342 ntTSL 5 BASIC4.14□□□□□ -1.75
CKS1BP61024 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC4.14□□□□□ -1.75
CKS1BP61024 AC137549.1-201ENST00000514243 533 ntBASIC4.14□□□□□ -1.75
CKS1BP61024 VPS37A-208ENST00000521005 479 ntTSL 3 BASIC4.14□□□□□ -1.75
CKS1BP61024 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC4.14□□□□□ -1.75
CKS1BP61024 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC4.14□□□□□ -1.75
CKS1BP61024 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CKS1BP61024 AL355075.1-201ENST00000528210 468 ntTSL 2 BASIC4.14□□□□□ -1.75
CKS1BP61024 AC009729.1-201ENST00000548873 1133 ntBASIC4.14□□□□□ -1.75
CKS1BP61024 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CKS1BP61024 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC4.14□□□□□ -1.75
CKS1BP61024 AC005519.1-201ENST00000554490 601 ntBASIC4.14□□□□□ -1.75
CKS1BP61024 HNRNPA1P74-201ENST00000560782 835 ntBASIC4.14□□□□□ -1.75
CKS1BP61024 RN7SL131P-201ENST00000579043 256 ntBASIC4.14□□□□□ -1.75
CKS1BP61024 RN7SL426P-201ENST00000579106 295 ntBASIC4.14□□□□□ -1.75
CKS1BP61024 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC4.14□□□□□ -1.75
CKS1BP61024 DYNLL1P1-201ENST00000595442 269 ntBASIC4.14□□□□□ -1.75
CKS1BP61024 RPS4XP21-201ENST00000603814 750 ntBASIC4.14□□□□□ -1.75
CKS1BP61024 AC007786.3-201ENST00000615154 596 ntBASIC4.14□□□□□ -1.75
CKS1BP61024 ZNF710-AS1-202ENST00000620791 2133 ntBASIC4.14□□□□□ -1.75
CKS1BP61024 DLST-216ENST00000626051 252 ntTSL 5 BASIC4.14□□□□□ -1.75
CKS1BP61024 FRG1EP-201ENST00000634469 770 ntBASIC4.14□□□□□ -1.75
CKS1BP61024 AC132825.8-201ENST00000640783 297 ntBASIC4.14□□□□□ -1.75
CKS1BP61024 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.14□□□□□ -1.75
CKS1BP61024 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
CKS1BP61024 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CKS1BP61024 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.14□□□□□ -1.75
CKS1BP61024 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
CKS1BP61024 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
CKS1BP61024 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC4.13□□□□□ -1.75
CKS1BP61024 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.13□□□□□ -1.75
CKS1BP61024 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
CKS1BP61024 AL353743.3-201ENST00000442109 1468 ntBASIC4.13□□□□□ -1.75
CKS1BP61024 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CKS1BP61024 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CKS1BP61024 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
CKS1BP61024 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CKS1BP61024 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC4.13□□□□□ -1.75
CKS1BP61024 SNORD35A-201ENST00000363389 86 ntBASIC4.13□□□□□ -1.75
CKS1BP61024 OR10R2-201ENST00000368152 1008 ntAPPRIS P2 BASIC4.13□□□□□ -1.75
CKS1BP61024 FDPSP5-201ENST00000399474 1057 ntBASIC4.13□□□□□ -1.75
CKS1BP61024 AL512430.2-201ENST00000406786 339 ntBASIC4.13□□□□□ -1.75
CKS1BP61024 RN7SKP117-201ENST00000410175 264 ntBASIC4.13□□□□□ -1.75
CKS1BP61024 RN7SKP39-201ENST00000410773 322 ntBASIC4.13□□□□□ -1.75
CKS1BP61024 AC015977.1-201ENST00000418887 292 ntBASIC4.13□□□□□ -1.75
CKS1BP61024 AC019205.1-201ENST00000421830 730 ntBASIC4.13□□□□□ -1.75
CKS1BP61024 TBX18-AS1-201ENST00000423086 421 ntTSL 3 BASIC4.13□□□□□ -1.75
CKS1BP61024 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC4.13□□□□□ -1.75
CKS1BP61024 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC4.13□□□□□ -1.75
CKS1BP61024 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC4.13□□□□□ -1.75
CKS1BP61024 AC239798.3-201ENST00000454459 408 ntBASIC4.13□□□□□ -1.75
CKS1BP61024 AC019084.1-201ENST00000457337 432 ntBASIC4.13□□□□□ -1.75
CKS1BP61024 AC073594.1-201ENST00000462065 364 ntBASIC4.13□□□□□ -1.75
CKS1BP61024 AC239804.1-201ENST00000466343 869 ntTSL 5 BASIC4.13□□□□□ -1.75
CKS1BP61024 LINC02218-202ENST00000504998 582 ntTSL 4 BASIC4.13□□□□□ -1.75
CKS1BP61024 AC093870.1-201ENST00000506837 213 ntBASIC4.13□□□□□ -1.75
CKS1BP61024 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC4.13□□□□□ -1.75
CKS1BP61024 AC093816.1-201ENST00000515076 913 ntBASIC4.13□□□□□ -1.75
CKS1BP61024 AP003467.1-201ENST00000517397 301 ntTSL 5 BASIC4.13□□□□□ -1.75
CKS1BP61024 TPM3P3-201ENST00000521343 354 ntBASIC4.13□□□□□ -1.75
CKS1BP61024 AP001994.1-201ENST00000527539 826 ntBASIC4.13□□□□□ -1.75
CKS1BP61024 AC092865.1-201ENST00000544395 1023 ntBASIC4.13□□□□□ -1.75
CKS1BP61024 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC4.13□□□□□ -1.75
CKS1BP61024 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC4.13□□□□□ -1.75
CKS1BP61024 DYNLL1P4-201ENST00000549314 266 ntBASIC4.13□□□□□ -1.75
CKS1BP61024 AC023080.1-201ENST00000551663 931 ntBASIC4.13□□□□□ -1.75
CKS1BP61024 AC080011.1-201ENST00000552378 989 ntTSL 3 BASIC4.13□□□□□ -1.75
CKS1BP61024 SMARCE1P3-201ENST00000553649 1231 ntBASIC4.13□□□□□ -1.75
CKS1BP61024 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC4.13□□□□□ -1.75
CKS1BP61024 CHMP1B-AS1-201ENST00000586474 553 ntTSL 4 BASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 93.3 ms