Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 RNU1-94P-201ENST00000362627 173 ntBASIC5.57□□□□□ -1.52
GTF2A1P52655 SNORD35A-201ENST00000363389 86 ntBASIC5.57□□□□□ -1.52
GTF2A1P52655 AC074375.1-201ENST00000372993 192 ntBASIC5.57□□□□□ -1.52
GTF2A1P52655 NQO1-202ENST00000379046 1105 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
GTF2A1P52655 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC5.57□□□□□ -1.52
GTF2A1P52655 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
GTF2A1P52655 RN7SKP281-201ENST00000410472 352 ntBASIC5.57□□□□□ -1.52
GTF2A1P52655 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.57□□□□□ -1.52
GTF2A1P52655 AC104333.2-201ENST00000422630 192 ntBASIC5.57□□□□□ -1.52
GTF2A1P52655 AC009303.1-201ENST00000426307 352 ntBASIC5.57□□□□□ -1.52
GTF2A1P52655 GAPDHP19-201ENST00000431768 1005 ntBASIC5.57□□□□□ -1.52
GTF2A1P52655 MED28P4-201ENST00000433137 572 ntBASIC5.57□□□□□ -1.52
GTF2A1P52655 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC5.57□□□□□ -1.52
GTF2A1P52655 AL022157.1-201ENST00000439622 665 ntTSL 2 BASIC5.57□□□□□ -1.52
GTF2A1P52655 UBBP5-201ENST00000446970 266 ntBASIC5.57□□□□□ -1.52
GTF2A1P52655 AL031584.1-201ENST00000447169 754 ntBASIC5.57□□□□□ -1.52
GTF2A1P52655 AL591363.1-201ENST00000450091 483 ntBASIC5.57□□□□□ -1.52
GTF2A1P52655 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC5.57□□□□□ -1.52
GTF2A1P52655 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
GTF2A1P52655 AC093878.1-201ENST00000515630 432 ntBASIC5.57□□□□□ -1.52
GTF2A1P52655 XAGE1B-205ENST00000518075 472 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
GTF2A1P52655 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.57□□□□□ -1.52
GTF2A1P52655 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.57□□□□□ -1.52
GTF2A1P52655 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC5.57□□□□□ -1.52
GTF2A1P52655 AC125612.1-201ENST00000547580 377 ntBASIC5.57□□□□□ -1.52
GTF2A1P52655 CIPC-206ENST00000555611 599 ntTSL 4 BASIC5.57□□□□□ -1.52
GTF2A1P52655 LINC01146-203ENST00000555996 459 ntTSL 2 BASIC5.57□□□□□ -1.52
GTF2A1P52655 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC5.57□□□□□ -1.52
GTF2A1P52655 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC5.57□□□□□ -1.52
GTF2A1P52655 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC5.57□□□□□ -1.52
GTF2A1P52655 MIR3187-201ENST00000583431 70 ntBASIC5.57□□□□□ -1.52
GTF2A1P52655 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
GTF2A1P52655 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC5.57□□□□□ -1.52
GTF2A1P52655 AL139124.1-201ENST00000609123 421 ntBASIC5.57□□□□□ -1.52
GTF2A1P52655 AL355974.3-201ENST00000617383 467 ntBASIC5.57□□□□□ -1.52
GTF2A1P52655 AC127071.2-201ENST00000623293 527 ntBASIC5.57□□□□□ -1.52
GTF2A1P52655 AC079298.2-201ENST00000623885 459 ntBASIC5.57□□□□□ -1.52
GTF2A1P52655 LINC00682-204ENST00000637677 931 ntTSL 5 BASIC5.57□□□□□ -1.52
GTF2A1P52655 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.57□□□□□ -1.52
GTF2A1P52655 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.57□□□□□ -1.52
GTF2A1P52655 DLD-204ENST00000437604 1859 ntTSL 2 BASIC5.57□□□□□ -1.52
GTF2A1P52655 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC5.57□□□□□ -1.52
GTF2A1P52655 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
GTF2A1P52655 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
GTF2A1P52655 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.57□□□□□ -1.52
GTF2A1P52655 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
GTF2A1P52655 GTF2H3-201ENST00000228955 1472 ntTSL 2 BASIC5.57□□□□□ -1.52
GTF2A1P52655 AL353743.3-201ENST00000442109 1468 ntBASIC5.57□□□□□ -1.52
GTF2A1P52655 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
GTF2A1P52655 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.57□□□□□ -1.52
GTF2A1P52655 ATP10D-203ENST00000504445 2550 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
GTF2A1P52655 RPL17-C18orf32-203ENST00000584895 1440 ntAPPRIS P1 TSL 3 BASIC5.57□□□□□ -1.52
GTF2A1P52655 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.56□□□□□ -1.52
GTF2A1P52655 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
GTF2A1P52655 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
GTF2A1P52655 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
GTF2A1P52655 EEF1A1P33-201ENST00000554413 1362 ntBASIC5.56□□□□□ -1.52
GTF2A1P52655 AC007878.1-201ENST00000434786 1615 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
GTF2A1P52655 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
GTF2A1P52655 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
GTF2A1P52655 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC5.56□□□□□ -1.52
GTF2A1P52655 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC5.56□□□□□ -1.52
GTF2A1P52655 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC5.56□□□□□ -1.52
GTF2A1P52655 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
GTF2A1P52655 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
GTF2A1P52655 TINAG-202ENST00000370864 692 ntTSL 2 BASIC5.56□□□□□ -1.52
GTF2A1P52655 TRAV22-201ENST00000390450 464 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
GTF2A1P52655 RN7SKP125-201ENST00000410481 302 ntBASIC5.56□□□□□ -1.52
GTF2A1P52655 RANP6-201ENST00000413691 644 ntBASIC5.56□□□□□ -1.52
GTF2A1P52655 LINC01687-203ENST00000420255 897 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
GTF2A1P52655 AL157884.1-201ENST00000424561 454 ntBASIC5.56□□□□□ -1.52
GTF2A1P52655 OR52S1P-201ENST00000427016 937 ntBASIC5.56□□□□□ -1.52
GTF2A1P52655 NDUFB4P8-201ENST00000435351 367 ntBASIC5.56□□□□□ -1.52
GTF2A1P52655 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC5.56□□□□□ -1.52
GTF2A1P52655 BMS1P10-201ENST00000443754 1120 ntBASIC5.56□□□□□ -1.52
GTF2A1P52655 AL353803.3-201ENST00000444641 335 ntBASIC5.56□□□□□ -1.52
GTF2A1P52655 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC5.56□□□□□ -1.52
GTF2A1P52655 LIX1L-AS1-206ENST00000447686 846 ntTSL 2 BASIC5.56□□□□□ -1.52
GTF2A1P52655 LINC00349-201ENST00000448748 841 ntTSL 5 BASIC5.56□□□□□ -1.52
GTF2A1P52655 AL121578.2-201ENST00000448797 447 ntBASIC5.56□□□□□ -1.52
GTF2A1P52655 CCNJP1-201ENST00000450600 1149 ntBASIC5.56□□□□□ -1.52
GTF2A1P52655 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC5.56□□□□□ -1.52
GTF2A1P52655 RAB7A-208ENST00000493186 329 ntTSL 5 BASIC5.56□□□□□ -1.52
GTF2A1P52655 HMGB3P16-201ENST00000508037 287 ntBASIC5.56□□□□□ -1.52
GTF2A1P52655 AC097460.2-201ENST00000511857 741 ntBASIC5.56□□□□□ -1.52
GTF2A1P52655 AC092709.1-201ENST00000521355 1045 ntBASIC5.56□□□□□ -1.52
GTF2A1P52655 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC5.56□□□□□ -1.52
GTF2A1P52655 AC091096.2-201ENST00000523284 587 ntTSL 3 BASIC5.56□□□□□ -1.52
GTF2A1P52655 AC090424.1-201ENST00000535243 736 ntBASIC5.56□□□□□ -1.52
GTF2A1P52655 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
GTF2A1P52655 AC006349.1-201ENST00000555526 235 ntBASIC5.56□□□□□ -1.52
GTF2A1P52655 AL133163.3-201ENST00000556448 504 ntTSL 5 BASIC5.56□□□□□ -1.52
GTF2A1P52655 AC026956.1-201ENST00000558741 396 ntBASIC5.56□□□□□ -1.52
GTF2A1P52655 HNRNPA1P74-201ENST00000560782 835 ntBASIC5.56□□□□□ -1.52
GTF2A1P52655 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.56□□□□□ -1.52
GTF2A1P52655 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC5.56□□□□□ -1.52
GTF2A1P52655 RPS4XP16-202ENST00000595905 807 ntTSL 5 BASIC5.56□□□□□ -1.52
GTF2A1P52655 AL513478.2-201ENST00000610400 988 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
GTF2A1P52655 MIR6085-201ENST00000618314 110 ntBASIC5.56□□□□□ -1.52
GTF2A1P52655 AL353747.4-202ENST00000625787 674 ntTSL 3 BASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms