Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC5.62□□□□□ -1.51
PTPN6P29350 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
PTPN6P29350 AC092332.1-201ENST00000563684 829 ntBASIC5.62□□□□□ -1.51
PTPN6P29350 LINC00556-201ENST00000569603 412 ntBASIC5.62□□□□□ -1.51
PTPN6P29350 STARD6-202ENST00000577499 696 ntTSL 2 BASIC5.62□□□□□ -1.51
PTPN6P29350 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC5.62□□□□□ -1.51
PTPN6P29350 AC087468.1-201ENST00000604365 630 ntBASIC5.62□□□□□ -1.51
PTPN6P29350 AC092681.3-201ENST00000609463 678 ntBASIC5.62□□□□□ -1.51
PTPN6P29350 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC5.62□□□□□ -1.51
PTPN6P29350 OR8G7P-201ENST00000616658 848 ntBASIC5.62□□□□□ -1.51
PTPN6P29350 RFPL4AP6-201ENST00000616792 846 ntBASIC5.62□□□□□ -1.51
PTPN6P29350 AL031658.2-201ENST00000616850 651 ntBASIC5.62□□□□□ -1.51
PTPN6P29350 AL512652.1-201ENST00000619006 500 ntBASIC5.62□□□□□ -1.51
PTPN6P29350 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC5.62□□□□□ -1.51
PTPN6P29350 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC5.62□□□□□ -1.51
PTPN6P29350 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC5.62□□□□□ -1.51
PTPN6P29350 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
PTPN6P29350 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
PTPN6P29350 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC5.62□□□□□ -1.51
PTPN6P29350 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC5.62□□□□□ -1.51
PTPN6P29350 AL513548.1-201ENST00000562904 1724 ntBASIC5.62□□□□□ -1.51
PTPN6P29350 AC009962.1-201ENST00000567327 3813 ntBASIC5.62□□□□□ -1.51
PTPN6P29350 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
PTPN6P29350 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
PTPN6P29350 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
PTPN6P29350 AC004656.1-201ENST00000568479 4951 ntBASIC5.61□□□□□ -1.51
PTPN6P29350 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
PTPN6P29350 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
PTPN6P29350 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.61□□□□□ -1.51
PTPN6P29350 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
PTPN6P29350 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
PTPN6P29350 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
PTPN6P29350 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
PTPN6P29350 MIR1282-201ENST00000408865 101 ntBASIC5.61□□□□□ -1.51
PTPN6P29350 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
PTPN6P29350 AL356968.2-201ENST00000412769 1257 ntBASIC5.61□□□□□ -1.51
PTPN6P29350 RPL35AP31-201ENST00000418340 337 ntBASIC5.61□□□□□ -1.51
PTPN6P29350 AC234781.4-201ENST00000419384 244 ntBASIC5.61□□□□□ -1.51
PTPN6P29350 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC5.61□□□□□ -1.51
PTPN6P29350 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC5.61□□□□□ -1.51
PTPN6P29350 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
PTPN6P29350 OR6C71P-201ENST00000432580 913 ntBASIC5.61□□□□□ -1.51
PTPN6P29350 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC5.61□□□□□ -1.51
PTPN6P29350 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC5.61□□□□□ -1.51
PTPN6P29350 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.61□□□□□ -1.51
PTPN6P29350 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC5.61□□□□□ -1.51
PTPN6P29350 RPL6P30-201ENST00000443382 862 ntBASIC5.61□□□□□ -1.51
PTPN6P29350 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC5.61□□□□□ -1.51
PTPN6P29350 RPL12P39-201ENST00000455456 496 ntBASIC5.61□□□□□ -1.51
PTPN6P29350 AC104164.1-201ENST00000460282 590 ntBASIC5.61□□□□□ -1.51
PTPN6P29350 RPL5P16-201ENST00000471467 790 ntBASIC5.61□□□□□ -1.51
PTPN6P29350 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC5.61□□□□□ -1.51
PTPN6P29350 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC5.61□□□□□ -1.51
PTPN6P29350 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
PTPN6P29350 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.61□□□□□ -1.51
PTPN6P29350 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC5.61□□□□□ -1.51
PTPN6P29350 AL121594.2-201ENST00000541658 472 ntBASIC5.61□□□□□ -1.51
PTPN6P29350 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC5.61□□□□□ -1.51
PTPN6P29350 MED21-206ENST00000546323 575 ntTSL 3 BASIC5.61□□□□□ -1.51
PTPN6P29350 PSMA4-209ENST00000559082 1094 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
PTPN6P29350 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.61□□□□□ -1.51
PTPN6P29350 AP005432.1-201ENST00000580891 3485 ntBASIC5.61□□□□□ -1.51
PTPN6P29350 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC5.61□□□□□ -1.51
PTPN6P29350 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC5.61□□□□□ -1.51
PTPN6P29350 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC5.61□□□□□ -1.51
PTPN6P29350 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC5.61□□□□□ -1.51
PTPN6P29350 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC5.61□□□□□ -1.51
PTPN6P29350 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC5.61□□□□□ -1.51
PTPN6P29350 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC5.61□□□□□ -1.51
PTPN6P29350 AC073333.2-201ENST00000603589 769 ntBASIC5.61□□□□□ -1.51
PTPN6P29350 AL645933.2-201ENST00000606743 1207 ntBASIC5.61□□□□□ -1.51
PTPN6P29350 AC096586.2-201ENST00000610260 441 ntBASIC5.61□□□□□ -1.51
PTPN6P29350 AC092266.1-201ENST00000610958 165 ntBASIC5.61□□□□□ -1.51
PTPN6P29350 AC025262.3-201ENST00000623666 360 ntBASIC5.61□□□□□ -1.51
PTPN6P29350 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC5.61□□□□□ -1.51
PTPN6P29350 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC5.61□□□□□ -1.51
PTPN6P29350 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC5.61□□□□□ -1.51
PTPN6P29350 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
PTPN6P29350 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
PTPN6P29350 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
PTPN6P29350 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
PTPN6P29350 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC5.6□□□□□ -1.51
PTPN6P29350 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PTPN6P29350 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC5.6□□□□□ -1.51
PTPN6P29350 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.6□□□□□ -1.51
PTPN6P29350 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
PTPN6P29350 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC5.6□□□□□ -1.51
PTPN6P29350 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
PTPN6P29350 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC5.6□□□□□ -1.51
PTPN6P29350 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
PTPN6P29350 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
PTPN6P29350 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
PTPN6P29350 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
PTPN6P29350 ING3-204ENST00000431467 1447 ntTSL 2 BASIC5.6□□□□□ -1.51
PTPN6P29350 AL354854.1-201ENST00000455940 1363 ntBASIC5.6□□□□□ -1.51
PTPN6P29350 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
PTPN6P29350 COX6B1P3-201ENST00000312310 260 ntBASIC5.6□□□□□ -1.51
PTPN6P29350 RNU11-201ENST00000387069 134 ntBASIC5.6□□□□□ -1.51
PTPN6P29350 GAS5-202ENST00000414075 413 ntTSL 2 BASIC5.6□□□□□ -1.51
PTPN6P29350 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms