Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
MMP3P08254 AL731534.1-201ENST00000434711 269 ntBASIC6.48□□□□□ -1.37
MMP3P08254 AL390119.1-201ENST00000440329 312 ntBASIC6.48□□□□□ -1.37
MMP3P08254 SPRYD7P1-201ENST00000443861 570 ntBASIC6.48□□□□□ -1.37
MMP3P08254 AL163193.1-201ENST00000444895 788 ntBASIC6.48□□□□□ -1.37
MMP3P08254 AL603882.1-201ENST00000463059 681 ntBASIC6.48□□□□□ -1.37
MMP3P08254 RPS3AP15-201ENST00000483874 781 ntBASIC6.48□□□□□ -1.37
MMP3P08254 AP002981.1-201ENST00000517692 975 ntBASIC6.48□□□□□ -1.37
MMP3P08254 AC021678.3-201ENST00000517893 476 ntBASIC6.48□□□□□ -1.37
MMP3P08254 AC139365.2-201ENST00000517972 253 ntBASIC6.48□□□□□ -1.37
MMP3P08254 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC6.48□□□□□ -1.37
MMP3P08254 AC078878.1-201ENST00000539832 958 ntBASIC6.48□□□□□ -1.37
MMP3P08254 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC6.48□□□□□ -1.37
MMP3P08254 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC6.48□□□□□ -1.37
MMP3P08254 SMARCE1P3-201ENST00000553649 1231 ntBASIC6.48□□□□□ -1.37
MMP3P08254 LRRC36-205ENST00000563189 2104 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
MMP3P08254 AC090651.1-201ENST00000567865 634 ntBASIC6.48□□□□□ -1.37
MMP3P08254 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC6.48□□□□□ -1.37
MMP3P08254 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC6.48□□□□□ -1.37
MMP3P08254 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC6.48□□□□□ -1.37
MMP3P08254 AC005520.3-201ENST00000602874 370 ntBASIC6.48□□□□□ -1.37
MMP3P08254 AC007204.2-201ENST00000615022 616 ntBASIC6.48□□□□□ -1.37
MMP3P08254 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC6.48□□□□□ -1.37
MMP3P08254 AL118508.4-201ENST00000624142 1176 ntBASIC6.48□□□□□ -1.37
MMP3P08254 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC6.48□□□□□ -1.37
MMP3P08254 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC6.48□□□□□ -1.37
MMP3P08254 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC6.48□□□□□ -1.37
MMP3P08254 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
MMP3P08254 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
MMP3P08254 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
MMP3P08254 AC114786.1-201ENST00000512892 1415 ntBASIC6.48□□□□□ -1.37
MMP3P08254 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC6.48□□□□□ -1.37
MMP3P08254 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
MMP3P08254 GTF2IP4-201ENST00000453092 2054 ntBASIC6.48□□□□□ -1.37
MMP3P08254 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
MMP3P08254 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
MMP3P08254 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC6.47□□□□□ -1.37
MMP3P08254 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
MMP3P08254 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC6.47□□□□□ -1.37
MMP3P08254 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
MMP3P08254 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC6.47□□□□□ -1.37
MMP3P08254 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
MMP3P08254 RMRPP5-201ENST00000411156 267 ntBASIC6.47□□□□□ -1.37
MMP3P08254 HMGA1P8-201ENST00000414130 321 ntBASIC6.47□□□□□ -1.37
MMP3P08254 FAM204CP-201ENST00000424489 642 ntBASIC6.47□□□□□ -1.37
MMP3P08254 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC6.47□□□□□ -1.37
MMP3P08254 OR52A4P-202ENST00000481634 799 ntBASIC6.47□□□□□ -1.37
MMP3P08254 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC6.47□□□□□ -1.37
MMP3P08254 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC6.47□□□□□ -1.37
MMP3P08254 AC147055.1-201ENST00000509261 750 ntBASIC6.47□□□□□ -1.37
MMP3P08254 RN7SKP288-201ENST00000516227 268 ntBASIC6.47□□□□□ -1.37
MMP3P08254 RNA5SP34-201ENST00000516887 130 ntBASIC6.47□□□□□ -1.37
MMP3P08254 IGLV2-28-201ENST00000520681 304 ntBASIC6.47□□□□□ -1.37
MMP3P08254 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC6.47□□□□□ -1.37
MMP3P08254 DCN-210ENST00000547568 823 ntTSL 3 BASIC6.47□□□□□ -1.37
MMP3P08254 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
MMP3P08254 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC6.47□□□□□ -1.37
MMP3P08254 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC6.47□□□□□ -1.37
MMP3P08254 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
MMP3P08254 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC6.47□□□□□ -1.37
MMP3P08254 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC6.47□□□□□ -1.37
MMP3P08254 AC016911.1-201ENST00000613297 452 ntBASIC6.47□□□□□ -1.37
MMP3P08254 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC6.47□□□□□ -1.37
MMP3P08254 AL354696.1-201ENST00000614652 497 ntBASIC6.47□□□□□ -1.37
MMP3P08254 AL390318.1-201ENST00000624564 687 ntBASIC6.47□□□□□ -1.37
MMP3P08254 AC079776.5-201ENST00000641920 211 ntBASIC6.47□□□□□ -1.37
MMP3P08254 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
MMP3P08254 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
MMP3P08254 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
MMP3P08254 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
MMP3P08254 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
MMP3P08254 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
MMP3P08254 CR383656.5-201ENST00000547616 1340 ntBASIC6.47□□□□□ -1.37
MMP3P08254 AC233968.1-201ENST00000611212 1300 ntBASIC6.47□□□□□ -1.37
MMP3P08254 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
MMP3P08254 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
MMP3P08254 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
MMP3P08254 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
MMP3P08254 AC130304.1-201ENST00000622942 2385 ntBASIC6.46□□□□□ -1.37
MMP3P08254 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
MMP3P08254 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC6.46□□□□□ -1.37
MMP3P08254 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
MMP3P08254 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC6.46□□□□□ -1.38
MMP3P08254 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC6.46□□□□□ -1.38
MMP3P08254 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC6.46□□□□□ -1.38
MMP3P08254 AC116036.1-201ENST00000412199 367 ntBASIC6.46□□□□□ -1.38
MMP3P08254 AL353626.3-201ENST00000413399 657 ntBASIC6.46□□□□□ -1.38
MMP3P08254 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC6.46□□□□□ -1.38
MMP3P08254 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC6.46□□□□□ -1.38
MMP3P08254 AC016027.5-201ENST00000427227 210 ntBASIC6.46□□□□□ -1.38
MMP3P08254 CFL1P1-202ENST00000432948 411 ntBASIC6.46□□□□□ -1.38
MMP3P08254 UBE2V2P1-201ENST00000434717 398 ntBASIC6.46□□□□□ -1.38
MMP3P08254 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC6.46□□□□□ -1.38
MMP3P08254 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC6.46□□□□□ -1.38
MMP3P08254 RN7SL799P-201ENST00000475891 298 ntBASIC6.46□□□□□ -1.38
MMP3P08254 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC6.46□□□□□ -1.38
MMP3P08254 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC6.46□□□□□ -1.38
MMP3P08254 BX510359.5-201ENST00000515651 304 ntBASIC6.46□□□□□ -1.38
MMP3P08254 MIR2117-201ENST00000516780 80 ntBASIC6.46□□□□□ -1.38
MMP3P08254 RN7SKP98-201ENST00000517070 156 ntBASIC6.46□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms