Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC9.85□□□□□ -0.83
CUX2O14529 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC9.85□□□□□ -0.83
CUX2O14529 AC099654.6-201ENST00000636487 512 ntBASIC9.85□□□□□ -0.83
CUX2O14529 SLC14A1-201ENST00000321925 3971 ntAPPRIS P3 TSL 1 (best) BASIC9.85□□□□□ -0.83
CUX2O14529 CAST-222ENST00000508579 1758 ntTSL 2 BASIC9.85□□□□□ -0.83
CUX2O14529 AC096921.2-201ENST00000561507 1916 ntBASIC9.85□□□□□ -0.83
CUX2O14529 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC9.85□□□□□ -0.83
CUX2O14529 GTF2IP4-201ENST00000453092 2054 ntBASIC9.85□□□□□ -0.83
CUX2O14529 AC001226.2-204ENST00000638101 2645 ntAPPRIS ALT2 TSL 5 BASIC9.85□□□□□ -0.83
CUX2O14529 CAST-202ENST00000325674 3356 ntTSL 5 BASIC9.85□□□□□ -0.83
CUX2O14529 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
CUX2O14529 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
CUX2O14529 AC087477.2-202ENST00000558499 4856 ntTSL 4 BASIC9.85□□□□□ -0.83
CUX2O14529 PAK5-201ENST00000353224 4500 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
CUX2O14529 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC9.85□□□□□ -0.83
CUX2O14529 SNORA48.7-201ENST00000391302 135 ntBASIC9.85□□□□□ -0.83
CUX2O14529 CAV1-204ENST00000393470 598 ntTSL 4 BASIC9.85□□□□□ -0.83
CUX2O14529 CHMP1B2P-201ENST00000399581 597 ntBASIC9.85□□□□□ -0.83
CUX2O14529 DNAJA1P4-201ENST00000406473 1166 ntBASIC9.85□□□□□ -0.83
CUX2O14529 SNORA11.2-201ENST00000408318 127 ntBASIC9.85□□□□□ -0.83
CUX2O14529 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC9.85□□□□□ -0.83
CUX2O14529 FABP5P2-201ENST00000439042 408 ntBASIC9.85□□□□□ -0.83
CUX2O14529 CYCSP42-201ENST00000450823 238 ntBASIC9.85□□□□□ -0.83
CUX2O14529 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC9.85□□□□□ -0.83
CUX2O14529 RN7SKP147-201ENST00000517154 244 ntBASIC9.85□□□□□ -0.83
CUX2O14529 IGHV1-14-201ENST00000523391 241 ntBASIC9.85□□□□□ -0.83
CUX2O14529 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
CUX2O14529 AC092490.3-201ENST00000545370 572 ntBASIC9.85□□□□□ -0.83
CUX2O14529 GLRXP2-201ENST00000555594 321 ntBASIC9.85□□□□□ -0.83
CUX2O14529 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
CUX2O14529 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC9.85□□□□□ -0.83
CUX2O14529 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
CUX2O14529 ZNF532-224ENST00000591808 5171 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
CUX2O14529 AC063977.5-201ENST00000601044 974 ntBASIC9.85□□□□□ -0.83
CUX2O14529 TEX41-238ENST00000604253 709 ntTSL 5 BASIC9.85□□□□□ -0.83
CUX2O14529 MIR92B-201ENST00000607575 96 ntBASIC9.85□□□□□ -0.83
CUX2O14529 AC011369.2-201ENST00000624423 1567 ntBASIC9.85□□□□□ -0.83
CUX2O14529 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC9.84□□□□□ -0.83
CUX2O14529 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
CUX2O14529 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC9.84□□□□□ -0.83
CUX2O14529 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC9.84□□□□□ -0.83
CUX2O14529 KIAA0586-201ENST00000261244 4807 ntAPPRIS P3 TSL 1 (best) BASIC9.84□□□□□ -0.83
CUX2O14529 LPP-208ENST00000448637 5835 ntTSL 5 BASIC9.84□□□□□ -0.83
CUX2O14529 AC011493.1-201ENST00000596753 1632 ntBASIC9.84□□□□□ -0.83
CUX2O14529 NIN-204ENST00000382043 4216 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
CUX2O14529 FAM186A-201ENST00000327337 7127 ntAPPRIS P2 TSL 5 BASIC9.84□□□□□ -0.83
CUX2O14529 KIAA1958-203ENST00000536272 7650 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
CUX2O14529 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
CUX2O14529 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC9.84□□□□□ -0.83
CUX2O14529 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC9.84□□□□□ -0.83
CUX2O14529 MUC3A-203ENST00000483366 9944 ntAPPRIS ALT2 TSL 5 BASIC9.84□□□□□ -0.83
CUX2O14529 MIR23B-201ENST00000384832 97 ntBASIC9.84□□□□□ -0.83
CUX2O14529 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC9.84□□□□□ -0.83
CUX2O14529 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC9.84□□□□□ -0.83
CUX2O14529 RPL23AP60-201ENST00000450011 454 ntBASIC9.84□□□□□ -0.83
CUX2O14529 SDC4P-201ENST00000453285 601 ntBASIC9.84□□□□□ -0.83
CUX2O14529 RN7SL354P-201ENST00000469282 294 ntBASIC9.84□□□□□ -0.83
CUX2O14529 AC103792.1-201ENST00000603591 919 ntBASIC9.84□□□□□ -0.83
CUX2O14529 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
CUX2O14529 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
CUX2O14529 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
CUX2O14529 FZD3-204ENST00000537916 13740 ntAPPRIS P1 TSL 2 BASIC9.84□□□□□ -0.83
CUX2O14529 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
CUX2O14529 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC9.83□□□□□ -0.84
CUX2O14529 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
CUX2O14529 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
CUX2O14529 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
CUX2O14529 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
CUX2O14529 SRPX2-201ENST00000373004 6679 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
CUX2O14529 PDE4DIP-246ENST00000618462 8150 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
CUX2O14529 HIST1H3PS1-201ENST00000404612 417 ntBASIC9.83□□□□□ -0.84
CUX2O14529 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC9.83□□□□□ -0.84
CUX2O14529 PTCD2P2-201ENST00000415579 1095 ntBASIC9.83□□□□□ -0.84
CUX2O14529 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC9.83□□□□□ -0.84
CUX2O14529 AC106730.2-201ENST00000566641 540 ntBASIC9.83□□□□□ -0.84
CUX2O14529 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
CUX2O14529 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC9.83□□□□□ -0.84
CUX2O14529 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC9.83□□□□□ -0.84
CUX2O14529 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC9.83□□□□□ -0.84
CUX2O14529 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC9.83□□□□□ -0.84
CUX2O14529 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC9.82□□□□□ -0.84
CUX2O14529 USP37-201ENST00000258399 8032 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
CUX2O14529 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC9.82□□□□□ -0.84
CUX2O14529 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
CUX2O14529 AP003119.3-201ENST00000566747 4192 ntBASIC9.82□□□□□ -0.84
CUX2O14529 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC9.82□□□□□ -0.84
CUX2O14529 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC9.82□□□□□ -0.84
CUX2O14529 SLC25A40-201ENST00000341119 4045 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
CUX2O14529 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC9.82□□□□□ -0.84
CUX2O14529 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC9.82□□□□□ -0.84
CUX2O14529 FHIT-201ENST00000341848 174 ntTSL 3 BASIC9.82□□□□□ -0.84
CUX2O14529 SNORA67-201ENST00000384423 137 ntBASIC9.82□□□□□ -0.84
CUX2O14529 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC9.82□□□□□ -0.84
CUX2O14529 MIR1193-201ENST00000408109 78 ntBASIC9.82□□□□□ -0.84
CUX2O14529 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC9.82□□□□□ -0.84
CUX2O14529 TRY2P-201ENST00000448860 689 ntBASIC9.82□□□□□ -0.84
CUX2O14529 HSPE1P2-201ENST00000554777 306 ntBASIC9.82□□□□□ -0.84
CUX2O14529 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC9.82□□□□□ -0.84
CUX2O14529 AC108449.2-201ENST00000560865 552 ntTSL 3 BASIC9.82□□□□□ -0.84
CUX2O14529 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC9.82□□□□□ -0.84
Retrieved 100 of 98,524 protein–RNA pairs in 91.2 ms