Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 AL592447.1-201ENST00000447592 540 ntBASIC8.7□□□□□ -1.02
ZC3H4Q9UPT8 AL121578.2-201ENST00000448797 447 ntBASIC8.7□□□□□ -1.02
ZC3H4Q9UPT8 PPIAP20-201ENST00000449839 135 ntBASIC8.7□□□□□ -1.02
ZC3H4Q9UPT8 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
ZC3H4Q9UPT8 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC8.7□□□□□ -1.02
ZC3H4Q9UPT8 AC011005.4-201ENST00000466717 535 ntTSL 3 BASIC8.7□□□□□ -1.02
ZC3H4Q9UPT8 RPL35AP19-201ENST00000469425 329 ntBASIC8.7□□□□□ -1.02
ZC3H4Q9UPT8 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
ZC3H4Q9UPT8 KRT19P6-201ENST00000510983 209 ntBASIC8.7□□□□□ -1.02
ZC3H4Q9UPT8 TBCA-206ENST00000518338 551 ntTSL 2 BASIC8.7□□□□□ -1.02
ZC3H4Q9UPT8 AC106038.2-201ENST00000520706 568 ntBASIC8.7□□□□□ -1.02
ZC3H4Q9UPT8 AC013546.1-201ENST00000523232 564 ntTSL 4 BASIC8.7□□□□□ -1.02
ZC3H4Q9UPT8 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC8.7□□□□□ -1.02
ZC3H4Q9UPT8 OR4A43P-201ENST00000532938 908 ntBASIC8.7□□□□□ -1.02
ZC3H4Q9UPT8 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC8.7□□□□□ -1.02
ZC3H4Q9UPT8 AC006512.2-201ENST00000543250 486 ntBASIC8.7□□□□□ -1.02
ZC3H4Q9UPT8 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC8.7□□□□□ -1.02
ZC3H4Q9UPT8 AC007954.1-201ENST00000554198 494 ntBASIC8.7□□□□□ -1.02
ZC3H4Q9UPT8 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC8.7□□□□□ -1.02
ZC3H4Q9UPT8 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC8.7□□□□□ -1.02
ZC3H4Q9UPT8 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC8.7□□□□□ -1.02
ZC3H4Q9UPT8 AL136084.2-214ENST00000587726 716 ntTSL 5 BASIC8.7□□□□□ -1.02
ZC3H4Q9UPT8 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC8.7□□□□□ -1.02
ZC3H4Q9UPT8 LINC02028-206ENST00000593326 810 ntTSL 5 BASIC8.7□□□□□ -1.02
ZC3H4Q9UPT8 SUMO2P14-201ENST00000604488 293 ntBASIC8.7□□□□□ -1.02
ZC3H4Q9UPT8 SNORD91A-202ENST00000609620 191 ntBASIC8.7□□□□□ -1.02
ZC3H4Q9UPT8 AC063943.3-201ENST00000615562 356 ntBASIC8.7□□□□□ -1.02
ZC3H4Q9UPT8 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC8.7□□□□□ -1.02
ZC3H4Q9UPT8 AL133370.2-201ENST00000619934 439 ntBASIC8.7□□□□□ -1.02
ZC3H4Q9UPT8 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC8.7□□□□□ -1.02
ZC3H4Q9UPT8 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC8.7□□□□□ -1.02
ZC3H4Q9UPT8 OR5AK4P-201ENST00000635912 903 ntBASIC8.7□□□□□ -1.02
ZC3H4Q9UPT8 C1orf21-201ENST00000235307 10265 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
ZC3H4Q9UPT8 TTC3P1-201ENST00000399586 6081 ntBASIC8.7□□□□□ -1.02
ZC3H4Q9UPT8 CKAP2L-201ENST00000302450 4533 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
ZC3H4Q9UPT8 CEP57-207ENST00000537677 1647 ntAPPRIS ALT2 TSL 5 BASIC8.7□□□□□ -1.02
ZC3H4Q9UPT8 AC079298.1-201ENST00000625026 1619 ntBASIC8.7□□□□□ -1.02
ZC3H4Q9UPT8 ZFX-201ENST00000304543 2996 ntAPPRIS P1 TSL 5 BASIC8.7□□□□□ -1.02
ZC3H4Q9UPT8 AMBN-203ENST00000613447 1997 ntAPPRIS ALT2 TSL 5 BASIC8.7□□□□□ -1.02
ZC3H4Q9UPT8 EIF4B-201ENST00000262056 4148 ntAPPRIS P3 TSL 1 (best) BASIC8.7□□□□□ -1.02
ZC3H4Q9UPT8 FASLG-202ENST00000367721 1888 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
ZC3H4Q9UPT8 IFIT1P1-201ENST00000400497 1449 ntBASIC8.7□□□□□ -1.02
ZC3H4Q9UPT8 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
ZC3H4Q9UPT8 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC8.7□□□□□ -1.02
ZC3H4Q9UPT8 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC8.7□□□□□ -1.02
ZC3H4Q9UPT8 SLC4A10-204ENST00000421911 3398 ntTSL 5 BASIC8.7□□□□□ -1.02
ZC3H4Q9UPT8 SSPO-201ENST00000378016 15589 ntAPPRIS P1 TSL 5 BASIC8.69□□□□□ -1.02
ZC3H4Q9UPT8 LINC01537-201ENST00000450804 2450 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
ZC3H4Q9UPT8 EYA1-202ENST00000340726 4326 ntAPPRIS P3 TSL 1 (best) BASIC8.69□□□□□ -1.02
ZC3H4Q9UPT8 NCOA4-205ENST00000583565 2371 ntAPPRIS P1 TSL 2 BASIC8.69□□□□□ -1.02
ZC3H4Q9UPT8 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC8.69□□□□□ -1.02
ZC3H4Q9UPT8 LINC01630-208ENST00000635680 4363 ntTSL 5 BASIC8.69□□□□□ -1.02
ZC3H4Q9UPT8 OR2L13-203ENST00000641893 1817 ntAPPRIS P1 BASIC8.69□□□□□ -1.02
ZC3H4Q9UPT8 UBXN8-201ENST00000265616 1450 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
ZC3H4Q9UPT8 HYAL4-201ENST00000223026 2407 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
ZC3H4Q9UPT8 TIAL1-203ENST00000369093 5072 ntTSL 2 BASIC8.69□□□□□ -1.02
ZC3H4Q9UPT8 RUNX1T1-201ENST00000265814 7284 ntAPPRIS P3 TSL 5 BASIC8.69□□□□□ -1.02
ZC3H4Q9UPT8 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC8.69□□□□□ -1.02
ZC3H4Q9UPT8 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC8.69□□□□□ -1.02
ZC3H4Q9UPT8 SKIV2L2-201ENST00000230640 4192 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
ZC3H4Q9UPT8 Y_RNA.11-201ENST00000362375 109 ntBASIC8.69□□□□□ -1.02
ZC3H4Q9UPT8 AL391422.1-201ENST00000402155 436 ntBASIC8.69□□□□□ -1.02
ZC3H4Q9UPT8 RN7SKP33-201ENST00000410942 340 ntBASIC8.69□□□□□ -1.02
ZC3H4Q9UPT8 AL138831.1-201ENST00000415144 209 ntTSL 3 BASIC8.69□□□□□ -1.02
ZC3H4Q9UPT8 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC8.69□□□□□ -1.02
ZC3H4Q9UPT8 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC8.69□□□□□ -1.02
ZC3H4Q9UPT8 MTCO3P1-205ENST00000422088 832 ntBASIC8.69□□□□□ -1.02
ZC3H4Q9UPT8 AL139421.1-201ENST00000423010 169 ntBASIC8.69□□□□□ -1.02
ZC3H4Q9UPT8 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC8.69□□□□□ -1.02
ZC3H4Q9UPT8 Z83313.1-201ENST00000433780 718 ntBASIC8.69□□□□□ -1.02
ZC3H4Q9UPT8 USP9YP29-201ENST00000445112 563 ntBASIC8.69□□□□□ -1.02
ZC3H4Q9UPT8 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC8.69□□□□□ -1.02
ZC3H4Q9UPT8 RAB28P3-201ENST00000448325 597 ntBASIC8.69□□□□□ -1.02
ZC3H4Q9UPT8 AC104971.1-201ENST00000495117 578 ntBASIC8.69□□□□□ -1.02
ZC3H4Q9UPT8 FCF1P3-201ENST00000496394 590 ntBASIC8.69□□□□□ -1.02
ZC3H4Q9UPT8 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
ZC3H4Q9UPT8 RNU6-678P-201ENST00000516832 109 ntBASIC8.69□□□□□ -1.02
ZC3H4Q9UPT8 AC025881.1-201ENST00000518851 512 ntBASIC8.69□□□□□ -1.02
ZC3H4Q9UPT8 GLYATL1P4-201ENST00000529326 906 ntBASIC8.69□□□□□ -1.02
ZC3H4Q9UPT8 AC118273.2-201ENST00000532092 465 ntBASIC8.69□□□□□ -1.02
ZC3H4Q9UPT8 AC084121.1-201ENST00000533882 835 ntBASIC8.69□□□□□ -1.02
ZC3H4Q9UPT8 AP000619.3-201ENST00000535634 1127 ntBASIC8.69□□□□□ -1.02
ZC3H4Q9UPT8 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC8.69□□□□□ -1.02
ZC3H4Q9UPT8 AC084757.1-201ENST00000559987 490 ntBASIC8.69□□□□□ -1.02
ZC3H4Q9UPT8 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC8.69□□□□□ -1.02
ZC3H4Q9UPT8 PPIAP14-201ENST00000577627 496 ntBASIC8.69□□□□□ -1.02
ZC3H4Q9UPT8 ZNF207-207ENST00000577908 4672 ntAPPRIS ALT1 TSL 5 BASIC8.69□□□□□ -1.02
ZC3H4Q9UPT8 AC011447.2-201ENST00000592921 283 ntBASIC8.69□□□□□ -1.02
ZC3H4Q9UPT8 RPS11-202ENST00000594493 575 ntTSL 3 BASIC8.69□□□□□ -1.02
ZC3H4Q9UPT8 AL159169.2-201ENST00000610061 1269 ntBASIC8.69□□□□□ -1.02
ZC3H4Q9UPT8 MIR6729-201ENST00000618194 65 ntBASIC8.69□□□□□ -1.02
ZC3H4Q9UPT8 SAMD12-AS1-201ENST00000625758 718 ntTSL 5 BASIC8.69□□□□□ -1.02
ZC3H4Q9UPT8 AC083864.3-202ENST00000570271 1755 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
ZC3H4Q9UPT8 PHIP-201ENST00000275034 10460 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
ZC3H4Q9UPT8 ANKRD30A-205ENST00000611781 4474 ntAPPRIS ALT2 TSL 5 BASIC8.69□□□□□ -1.02
ZC3H4Q9UPT8 CUZD1-206ENST00000392790 2279 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
ZC3H4Q9UPT8 ZNF2-204ENST00000617923 3885 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
ZC3H4Q9UPT8 AC010894.3-201ENST00000442996 2400 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
ZC3H4Q9UPT8 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC8.69□□□□□ -1.02
ZC3H4Q9UPT8 AL031123.2-201ENST00000563225 3325 ntBASIC8.69□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 119.2 ms