Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
TM9SF3Q9HD45 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC6.02□□□□□ -1.45
TM9SF3Q9HD45 GEMIN2P1-201ENST00000454246 752 ntBASIC6.02□□□□□ -1.45
TM9SF3Q9HD45 AC104849.1-201ENST00000462623 405 ntBASIC6.02□□□□□ -1.45
TM9SF3Q9HD45 RPSAP37-201ENST00000470913 821 ntBASIC6.02□□□□□ -1.45
TM9SF3Q9HD45 TMEM97P2-201ENST00000517841 403 ntBASIC6.02□□□□□ -1.45
TM9SF3Q9HD45 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC6.02□□□□□ -1.45
TM9SF3Q9HD45 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC6.02□□□□□ -1.45
TM9SF3Q9HD45 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
TM9SF3Q9HD45 CASP5-209ENST00000531367 879 ntTSL 5 BASIC6.02□□□□□ -1.45
TM9SF3Q9HD45 PCNAP4-201ENST00000532690 730 ntBASIC6.02□□□□□ -1.45
TM9SF3Q9HD45 OR4A40P-201ENST00000533878 948 ntBASIC6.02□□□□□ -1.45
TM9SF3Q9HD45 AC090022.1-201ENST00000546569 311 ntBASIC6.02□□□□□ -1.45
TM9SF3Q9HD45 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC6.02□□□□□ -1.45
TM9SF3Q9HD45 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC6.02□□□□□ -1.45
TM9SF3Q9HD45 AC141002.1-201ENST00000607025 279 ntBASIC6.02□□□□□ -1.45
TM9SF3Q9HD45 AL136131.3-201ENST00000607600 188 ntBASIC6.02□□□□□ -1.45
TM9SF3Q9HD45 AC096861.1-201ENST00000616652 240 ntBASIC6.02□□□□□ -1.45
TM9SF3Q9HD45 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC6.02□□□□□ -1.45
TM9SF3Q9HD45 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
TM9SF3Q9HD45 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
TM9SF3Q9HD45 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
TM9SF3Q9HD45 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
TM9SF3Q9HD45 AC011503.2-201ENST00000594230 1500 ntBASIC6.02□□□□□ -1.45
TM9SF3Q9HD45 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
TM9SF3Q9HD45 AC092724.1-201ENST00000624623 3397 ntBASIC6.02□□□□□ -1.45
TM9SF3Q9HD45 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC6.02□□□□□ -1.45
TM9SF3Q9HD45 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC6.02□□□□□ -1.45
TM9SF3Q9HD45 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
TM9SF3Q9HD45 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
TM9SF3Q9HD45 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
TM9SF3Q9HD45 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC6.01□□□□□ -1.45
TM9SF3Q9HD45 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
TM9SF3Q9HD45 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC6.01□□□□□ -1.45
TM9SF3Q9HD45 ING3-204ENST00000431467 1447 ntTSL 2 BASIC6.01□□□□□ -1.45
TM9SF3Q9HD45 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC6.01□□□□□ -1.45
TM9SF3Q9HD45 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
TM9SF3Q9HD45 OR13C1P-202ENST00000641378 2919 ntBASIC6.01□□□□□ -1.45
TM9SF3Q9HD45 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC6.01□□□□□ -1.45
TM9SF3Q9HD45 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC6.01□□□□□ -1.45
TM9SF3Q9HD45 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC6.01□□□□□ -1.45
TM9SF3Q9HD45 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
TM9SF3Q9HD45 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
TM9SF3Q9HD45 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
TM9SF3Q9HD45 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
TM9SF3Q9HD45 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
TM9SF3Q9HD45 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC6.01□□□□□ -1.45
TM9SF3Q9HD45 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC6.01□□□□□ -1.45
TM9SF3Q9HD45 SDHDP6-201ENST00000414693 480 ntBASIC6.01□□□□□ -1.45
TM9SF3Q9HD45 AL513325.1-201ENST00000417716 1034 ntBASIC6.01□□□□□ -1.45
TM9SF3Q9HD45 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC6.01□□□□□ -1.45
TM9SF3Q9HD45 AP000281.1-201ENST00000444036 316 ntBASIC6.01□□□□□ -1.45
TM9SF3Q9HD45 MTND6P5-201ENST00000448266 512 ntBASIC6.01□□□□□ -1.45
TM9SF3Q9HD45 YWHAEP1-201ENST00000453697 763 ntBASIC6.01□□□□□ -1.45
TM9SF3Q9HD45 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC6.01□□□□□ -1.45
TM9SF3Q9HD45 RPS27AP2-201ENST00000457576 465 ntBASIC6.01□□□□□ -1.45
TM9SF3Q9HD45 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC6.01□□□□□ -1.45
TM9SF3Q9HD45 RPSAP39-201ENST00000467439 883 ntBASIC6.01□□□□□ -1.45
TM9SF3Q9HD45 RN7SL269P-201ENST00000467795 305 ntBASIC6.01□□□□□ -1.45
TM9SF3Q9HD45 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC6.01□□□□□ -1.45
TM9SF3Q9HD45 CR383656.1-201ENST00000484916 377 ntBASIC6.01□□□□□ -1.45
TM9SF3Q9HD45 AC124945.1-201ENST00000485133 188 ntBASIC6.01□□□□□ -1.45
TM9SF3Q9HD45 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC6.01□□□□□ -1.45
TM9SF3Q9HD45 RNA5SP400-201ENST00000517155 111 ntBASIC6.01□□□□□ -1.45
TM9SF3Q9HD45 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC6.01□□□□□ -1.45
TM9SF3Q9HD45 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC6.01□□□□□ -1.45
TM9SF3Q9HD45 RPA2P3-201ENST00000533268 770 ntBASIC6.01□□□□□ -1.45
TM9SF3Q9HD45 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC6.01□□□□□ -1.45
TM9SF3Q9HD45 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC6.01□□□□□ -1.45
TM9SF3Q9HD45 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC6.01□□□□□ -1.45
TM9SF3Q9HD45 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC6.01□□□□□ -1.45
TM9SF3Q9HD45 MIR6826-201ENST00000617808 98 ntBASIC6.01□□□□□ -1.45
TM9SF3Q9HD45 AL137067.2-201ENST00000621202 131 ntBASIC6.01□□□□□ -1.45
TM9SF3Q9HD45 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC6.01□□□□□ -1.45
TM9SF3Q9HD45 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC6.01□□□□□ -1.45
TM9SF3Q9HD45 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
TM9SF3Q9HD45 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
TM9SF3Q9HD45 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC6.01□□□□□ -1.45
TM9SF3Q9HD45 AC007842.1-201ENST00000597336 2039 ntBASIC6.01□□□□□ -1.45
TM9SF3Q9HD45 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
TM9SF3Q9HD45 AC007342.5-201ENST00000571340 2142 ntBASIC6.01□□□□□ -1.45
TM9SF3Q9HD45 AC012254.3-201ENST00000591183 2117 ntBASIC6.01□□□□□ -1.45
TM9SF3Q9HD45 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
TM9SF3Q9HD45 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC6□□□□□ -1.45
TM9SF3Q9HD45 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC6□□□□□ -1.45
TM9SF3Q9HD45 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
TM9SF3Q9HD45 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
TM9SF3Q9HD45 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
TM9SF3Q9HD45 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC6□□□□□ -1.45
TM9SF3Q9HD45 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC6□□□□□ -1.45
TM9SF3Q9HD45 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC6□□□□□ -1.45
TM9SF3Q9HD45 DMD-228ENST00000541735 7080 ntTSL 5 BASIC6□□□□□ -1.45
TM9SF3Q9HD45 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
TM9SF3Q9HD45 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC6□□□□□ -1.45
TM9SF3Q9HD45 RNA5SP375-201ENST00000362975 119 ntBASIC6□□□□□ -1.45
TM9SF3Q9HD45 AC016769.2-201ENST00000414815 475 ntBASIC6□□□□□ -1.45
TM9SF3Q9HD45 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC6□□□□□ -1.45
TM9SF3Q9HD45 MGAT2P2-201ENST00000427194 797 ntBASIC6□□□□□ -1.45
TM9SF3Q9HD45 AL121776.1-201ENST00000429337 372 ntBASIC6□□□□□ -1.45
TM9SF3Q9HD45 LYPLA1P1-201ENST00000434514 622 ntBASIC6□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms