Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 NF1-214ENST00000490416 1329 ntTSL 3 BASIC4.21□□□□□ -1.74
LITAFQ99732 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
LITAFQ99732 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
LITAFQ99732 AC004158.1-201ENST00000564508 4319 ntBASIC4.2□□□□□ -1.74
LITAFQ99732 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
LITAFQ99732 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
LITAFQ99732 AL161912.4-201ENST00000623889 2468 ntBASIC4.2□□□□□ -1.74
LITAFQ99732 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
LITAFQ99732 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
LITAFQ99732 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC4.2□□□□□ -1.74
LITAFQ99732 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
LITAFQ99732 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
LITAFQ99732 KIAA1524-207ENST00000619684 2839 ntAPPRIS ALT1 TSL 5 BASIC4.2□□□□□ -1.74
LITAFQ99732 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
LITAFQ99732 MAP3K20-AS1-203ENST00000423106 2538 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
LITAFQ99732 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
LITAFQ99732 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC4.2□□□□□ -1.74
LITAFQ99732 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
LITAFQ99732 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
LITAFQ99732 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
LITAFQ99732 BTF3-201ENST00000335895 897 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
LITAFQ99732 RNU1-21P-201ENST00000363327 163 ntBASIC4.2□□□□□ -1.74
LITAFQ99732 RNA5SP302-201ENST00000364896 100 ntBASIC4.2□□□□□ -1.74
LITAFQ99732 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC4.2□□□□□ -1.74
LITAFQ99732 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC4.2□□□□□ -1.74
LITAFQ99732 SNORD116-2-201ENST00000384274 95 ntBASIC4.2□□□□□ -1.74
LITAFQ99732 SNORD116-6-201ENST00000384711 96 ntBASIC4.2□□□□□ -1.74
LITAFQ99732 RNA5SP53-201ENST00000391299 120 ntBASIC4.2□□□□□ -1.74
LITAFQ99732 RAN-201ENST00000392367 780 ntTSL 5 BASIC4.2□□□□□ -1.74
LITAFQ99732 AL049545.1-201ENST00000401856 572 ntBASIC4.2□□□□□ -1.74
LITAFQ99732 OR4F7P-201ENST00000402444 931 ntBASIC4.2□□□□□ -1.74
LITAFQ99732 OR4F1P-201ENST00000405102 938 ntBASIC4.2□□□□□ -1.74
LITAFQ99732 FIGN-202ENST00000409634 746 ntTSL 5 BASIC4.2□□□□□ -1.74
LITAFQ99732 AL157932.1-201ENST00000413246 363 ntTSL 3 BASIC4.2□□□□□ -1.74
LITAFQ99732 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC4.2□□□□□ -1.74
LITAFQ99732 CCR8-202ENST00000414803 1078 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
LITAFQ99732 USP9YP21-201ENST00000420603 432 ntBASIC4.2□□□□□ -1.74
LITAFQ99732 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC4.2□□□□□ -1.74
LITAFQ99732 OR4F2P-201ENST00000424047 938 ntBASIC4.2□□□□□ -1.74
LITAFQ99732 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC4.2□□□□□ -1.74
LITAFQ99732 KCNQ5-AS1-201ENST00000429832 1101 ntTSL 5 BASIC4.2□□□□□ -1.74
LITAFQ99732 FAF2P1-201ENST00000429974 1298 ntBASIC4.2□□□□□ -1.74
LITAFQ99732 AL357552.2-201ENST00000433876 353 ntTSL 5 BASIC4.2□□□□□ -1.74
LITAFQ99732 AC099670.2-201ENST00000435130 321 ntBASIC4.2□□□□□ -1.74
LITAFQ99732 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC4.2□□□□□ -1.74
LITAFQ99732 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC4.2□□□□□ -1.74
LITAFQ99732 AC012485.2-201ENST00000437372 982 ntTSL 5 BASIC4.2□□□□□ -1.74
LITAFQ99732 AC000041.1-201ENST00000439655 175 ntBASIC4.2□□□□□ -1.74
LITAFQ99732 SNRPFP2-201ENST00000440710 251 ntBASIC4.2□□□□□ -1.74
LITAFQ99732 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC4.2□□□□□ -1.74
LITAFQ99732 SETD6P1-201ENST00000444575 317 ntBASIC4.2□□□□□ -1.74
LITAFQ99732 PARD3-AS1-201ENST00000446211 302 ntTSL 2 BASIC4.2□□□□□ -1.74
LITAFQ99732 CYCSP42-201ENST00000450823 238 ntBASIC4.2□□□□□ -1.74
LITAFQ99732 AC007879.2-201ENST00000454444 551 ntTSL 4 BASIC4.2□□□□□ -1.74
LITAFQ99732 MED28P7-201ENST00000456611 530 ntBASIC4.2□□□□□ -1.74
LITAFQ99732 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC4.2□□□□□ -1.74
LITAFQ99732 NAP1L1P3-201ENST00000462291 880 ntBASIC4.2□□□□□ -1.74
LITAFQ99732 FAM74A1-201ENST00000465257 623 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
LITAFQ99732 NDUFA5P9-201ENST00000472609 340 ntBASIC4.2□□□□□ -1.74
LITAFQ99732 RPS26P6-201ENST00000475156 348 ntBASIC4.2□□□□□ -1.74
LITAFQ99732 RN7SL702P-201ENST00000488394 292 ntBASIC4.2□□□□□ -1.74
LITAFQ99732 SEC22A-210ENST00000492595 972 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
LITAFQ99732 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
LITAFQ99732 AC138409.2-202ENST00000507274 458 ntBASIC4.2□□□□□ -1.74
LITAFQ99732 TOMM22P4-201ENST00000511318 336 ntBASIC4.2□□□□□ -1.74
LITAFQ99732 AC027315.1-201ENST00000511592 469 ntTSL 3 BASIC4.2□□□□□ -1.74
LITAFQ99732 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC4.2□□□□□ -1.74
LITAFQ99732 AC139713.1-202ENST00000512366 460 ntBASIC4.2□□□□□ -1.74
LITAFQ99732 SCARNA5-201ENST00000516201 276 ntBASIC4.2□□□□□ -1.74
LITAFQ99732 COX6B1P4-201ENST00000519826 484 ntBASIC4.2□□□□□ -1.74
LITAFQ99732 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC4.2□□□□□ -1.74
LITAFQ99732 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC4.2□□□□□ -1.74
LITAFQ99732 CASP1P2-201ENST00000526830 1258 ntBASIC4.2□□□□□ -1.74
LITAFQ99732 OR6M2P-201ENST00000529831 871 ntBASIC4.2□□□□□ -1.74
LITAFQ99732 AP006587.2-201ENST00000530696 493 ntBASIC4.2□□□□□ -1.74
LITAFQ99732 RPL27A-210ENST00000531978 867 ntTSL 2 BASIC4.2□□□□□ -1.74
LITAFQ99732 OR7E128P-201ENST00000532736 1024 ntBASIC4.2□□□□□ -1.74
LITAFQ99732 AC068205.2-201ENST00000532864 771 ntTSL 5 BASIC4.2□□□□□ -1.74
LITAFQ99732 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
LITAFQ99732 BTG1P1-201ENST00000540396 508 ntBASIC4.2□□□□□ -1.74
LITAFQ99732 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC4.2□□□□□ -1.74
LITAFQ99732 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC4.2□□□□□ -1.74
LITAFQ99732 PCED1B-AS1-207ENST00000551432 522 ntTSL 5 BASIC4.2□□□□□ -1.74
LITAFQ99732 AC023794.4-201ENST00000551732 754 ntTSL 5 BASIC4.2□□□□□ -1.74
LITAFQ99732 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC4.2□□□□□ -1.74
LITAFQ99732 PPIAP6-201ENST00000557078 499 ntBASIC4.2□□□□□ -1.74
LITAFQ99732 AC092868.2-201ENST00000558749 497 ntTSL 3 BASIC4.2□□□□□ -1.74
LITAFQ99732 OR4F28P-201ENST00000559128 938 ntBASIC4.2□□□□□ -1.74
LITAFQ99732 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC4.2□□□□□ -1.74
LITAFQ99732 AC110603.1-201ENST00000580645 468 ntTSL 3 BASIC4.2□□□□□ -1.74
LITAFQ99732 AC027229.1-201ENST00000583887 253 ntBASIC4.2□□□□□ -1.74
LITAFQ99732 NPIPB1P-202ENST00000588786 828 ntBASIC4.2□□□□□ -1.74
LITAFQ99732 OR4F8P-201ENST00000589943 937 ntBASIC4.2□□□□□ -1.74
LITAFQ99732 LINC01837-204ENST00000593211 570 ntTSL 4 BASIC4.2□□□□□ -1.74
LITAFQ99732 AC006116.6-201ENST00000593258 1103 ntBASIC4.2□□□□□ -1.74
LITAFQ99732 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC4.2□□□□□ -1.74
LITAFQ99732 AC011487.2-201ENST00000600193 1228 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
LITAFQ99732 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC4.2□□□□□ -1.74
LITAFQ99732 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC4.2□□□□□ -1.74
LITAFQ99732 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 120.4 ms