Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC4.87□□□□□ -1.63
RTN4IP1Q8WWV3 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
RTN4IP1Q8WWV3 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
RTN4IP1Q8WWV3 MIR1275-201ENST00000408770 80 ntBASIC4.87□□□□□ -1.63
RTN4IP1Q8WWV3 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC4.87□□□□□ -1.63
RTN4IP1Q8WWV3 RNGTTP1-201ENST00000420965 728 ntBASIC4.87□□□□□ -1.63
RTN4IP1Q8WWV3 LINC01114-201ENST00000421071 482 ntTSL 3 BASIC4.87□□□□□ -1.63
RTN4IP1Q8WWV3 LINC01593-201ENST00000424355 388 ntTSL 5 BASIC4.87□□□□□ -1.63
RTN4IP1Q8WWV3 FTO-202ENST00000431610 707 ntTSL 3 BASIC4.87□□□□□ -1.63
RTN4IP1Q8WWV3 AL353662.1-201ENST00000439099 327 ntBASIC4.87□□□□□ -1.63
RTN4IP1Q8WWV3 RPL6P30-201ENST00000443382 862 ntBASIC4.87□□□□□ -1.63
RTN4IP1Q8WWV3 MED28P3-201ENST00000444288 531 ntBASIC4.87□□□□□ -1.63
RTN4IP1Q8WWV3 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC4.87□□□□□ -1.63
RTN4IP1Q8WWV3 YRDCP3-201ENST00000456507 480 ntBASIC4.87□□□□□ -1.63
RTN4IP1Q8WWV3 RNU1-88P-201ENST00000459274 128 ntBASIC4.87□□□□□ -1.63
RTN4IP1Q8WWV3 AC005165.2-201ENST00000466070 380 ntBASIC4.87□□□□□ -1.63
RTN4IP1Q8WWV3 AC006539.1-201ENST00000481419 501 ntBASIC4.87□□□□□ -1.63
RTN4IP1Q8WWV3 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC4.87□□□□□ -1.63
RTN4IP1Q8WWV3 AC122718.2-201ENST00000505325 591 ntBASIC4.87□□□□□ -1.63
RTN4IP1Q8WWV3 HSD3BP3-201ENST00000514706 994 ntBASIC4.87□□□□□ -1.63
RTN4IP1Q8WWV3 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC4.87□□□□□ -1.63
RTN4IP1Q8WWV3 AC009879.1-201ENST00000520029 839 ntBASIC4.87□□□□□ -1.63
RTN4IP1Q8WWV3 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC4.87□□□□□ -1.63
RTN4IP1Q8WWV3 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC4.87□□□□□ -1.63
RTN4IP1Q8WWV3 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC4.87□□□□□ -1.63
RTN4IP1Q8WWV3 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC4.87□□□□□ -1.63
RTN4IP1Q8WWV3 AC023906.3-201ENST00000559825 874 ntTSL 5 BASIC4.87□□□□□ -1.63
RTN4IP1Q8WWV3 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC4.87□□□□□ -1.63
RTN4IP1Q8WWV3 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC4.87□□□□□ -1.63
RTN4IP1Q8WWV3 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
RTN4IP1Q8WWV3 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC4.87□□□□□ -1.63
RTN4IP1Q8WWV3 AC124916.2-201ENST00000604416 224 ntBASIC4.87□□□□□ -1.63
RTN4IP1Q8WWV3 RPL12P48-201ENST00000605620 304 ntBASIC4.87□□□□□ -1.63
RTN4IP1Q8WWV3 AL022394.1-201ENST00000606979 292 ntBASIC4.87□□□□□ -1.63
RTN4IP1Q8WWV3 AC007786.3-201ENST00000615154 596 ntBASIC4.87□□□□□ -1.63
RTN4IP1Q8WWV3 AC004801.6-201ENST00000616571 978 ntBASIC4.87□□□□□ -1.63
RTN4IP1Q8WWV3 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
RTN4IP1Q8WWV3 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC4.87□□□□□ -1.63
RTN4IP1Q8WWV3 AP001052.1-201ENST00000626421 99 ntBASIC4.87□□□□□ -1.63
RTN4IP1Q8WWV3 AC073488.3-201ENST00000631611 778 ntBASIC4.87□□□□□ -1.63
RTN4IP1Q8WWV3 EEF1A1P30-201ENST00000429708 1315 ntBASIC4.87□□□□□ -1.63
RTN4IP1Q8WWV3 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
RTN4IP1Q8WWV3 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
RTN4IP1Q8WWV3 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
RTN4IP1Q8WWV3 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
RTN4IP1Q8WWV3 GNL2P1-201ENST00000451274 2190 ntBASIC4.87□□□□□ -1.63
RTN4IP1Q8WWV3 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
RTN4IP1Q8WWV3 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
RTN4IP1Q8WWV3 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
RTN4IP1Q8WWV3 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC4.86□□□□□ -1.63
RTN4IP1Q8WWV3 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC4.86□□□□□ -1.63
RTN4IP1Q8WWV3 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
RTN4IP1Q8WWV3 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC4.86□□□□□ -1.63
RTN4IP1Q8WWV3 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC4.86□□□□□ -1.63
RTN4IP1Q8WWV3 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC4.86□□□□□ -1.63
RTN4IP1Q8WWV3 MT4-201ENST00000219162 294 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
RTN4IP1Q8WWV3 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
RTN4IP1Q8WWV3 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
RTN4IP1Q8WWV3 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
RTN4IP1Q8WWV3 RNA5SP91-201ENST00000390902 119 ntBASIC4.86□□□□□ -1.63
RTN4IP1Q8WWV3 SNRPEP6-201ENST00000407465 277 ntBASIC4.86□□□□□ -1.63
RTN4IP1Q8WWV3 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC4.86□□□□□ -1.63
RTN4IP1Q8WWV3 GAS5-202ENST00000414075 413 ntTSL 2 BASIC4.86□□□□□ -1.63
RTN4IP1Q8WWV3 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC4.86□□□□□ -1.63
RTN4IP1Q8WWV3 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC4.86□□□□□ -1.63
RTN4IP1Q8WWV3 VN1R21P-201ENST00000426703 765 ntBASIC4.86□□□□□ -1.63
RTN4IP1Q8WWV3 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC4.86□□□□□ -1.63
RTN4IP1Q8WWV3 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC4.86□□□□□ -1.63
RTN4IP1Q8WWV3 AC118758.1-202ENST00000454719 225 ntBASIC4.86□□□□□ -1.63
RTN4IP1Q8WWV3 AC009963.3-201ENST00000458090 486 ntBASIC4.86□□□□□ -1.63
RTN4IP1Q8WWV3 AC090602.1-201ENST00000469695 252 ntBASIC4.86□□□□□ -1.63
RTN4IP1Q8WWV3 AC092865.4-201ENST00000477936 615 ntBASIC4.86□□□□□ -1.63
RTN4IP1Q8WWV3 AK6-203ENST00000502819 743 ntTSL 5 BASIC4.86□□□□□ -1.63
RTN4IP1Q8WWV3 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC4.86□□□□□ -1.63
RTN4IP1Q8WWV3 AC105420.1-201ENST00000504389 582 ntBASIC4.86□□□□□ -1.63
RTN4IP1Q8WWV3 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC4.86□□□□□ -1.63
RTN4IP1Q8WWV3 AC110056.1-201ENST00000525759 911 ntBASIC4.86□□□□□ -1.63
RTN4IP1Q8WWV3 OR4A43P-201ENST00000532938 908 ntBASIC4.86□□□□□ -1.63
RTN4IP1Q8WWV3 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC4.86□□□□□ -1.63
RTN4IP1Q8WWV3 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC4.86□□□□□ -1.63
RTN4IP1Q8WWV3 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
RTN4IP1Q8WWV3 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC4.86□□□□□ -1.63
RTN4IP1Q8WWV3 AC068768.2-201ENST00000602352 343 ntBASIC4.86□□□□□ -1.63
RTN4IP1Q8WWV3 HIRAP1-201ENST00000605318 787 ntBASIC4.86□□□□□ -1.63
RTN4IP1Q8WWV3 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC4.86□□□□□ -1.63
RTN4IP1Q8WWV3 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC4.86□□□□□ -1.63
RTN4IP1Q8WWV3 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
RTN4IP1Q8WWV3 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC4.86□□□□□ -1.63
RTN4IP1Q8WWV3 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
RTN4IP1Q8WWV3 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
RTN4IP1Q8WWV3 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
RTN4IP1Q8WWV3 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC4.86□□□□□ -1.63
RTN4IP1Q8WWV3 CPS1-IT1-201ENST00000628368 2306 ntBASIC4.86□□□□□ -1.63
RTN4IP1Q8WWV3 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
RTN4IP1Q8WWV3 CAP1P2-201ENST00000417455 1409 ntBASIC4.86□□□□□ -1.63
RTN4IP1Q8WWV3 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC4.86□□□□□ -1.63
RTN4IP1Q8WWV3 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC4.86□□□□□ -1.63
RTN4IP1Q8WWV3 AC008627.1-201ENST00000517511 1704 ntBASIC4.86□□□□□ -1.63
RTN4IP1Q8WWV3 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC4.86□□□□□ -1.63
RTN4IP1Q8WWV3 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms