Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC6.18□□□□□ -1.42
HMGB4Q8WW32 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC6.18□□□□□ -1.42
HMGB4Q8WW32 CKS1BP1-201ENST00000555221 240 ntBASIC6.18□□□□□ -1.42
HMGB4Q8WW32 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC6.18□□□□□ -1.42
HMGB4Q8WW32 AC027176.2-201ENST00000559166 746 ntBASIC6.18□□□□□ -1.42
HMGB4Q8WW32 AC092868.3-201ENST00000560515 784 ntBASIC6.18□□□□□ -1.42
HMGB4Q8WW32 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC6.18□□□□□ -1.42
HMGB4Q8WW32 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC6.18□□□□□ -1.42
HMGB4Q8WW32 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC6.18□□□□□ -1.42
HMGB4Q8WW32 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC6.18□□□□□ -1.42
HMGB4Q8WW32 AC005244.1-201ENST00000582566 339 ntBASIC6.18□□□□□ -1.42
HMGB4Q8WW32 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC6.18□□□□□ -1.42
HMGB4Q8WW32 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC6.18□□□□□ -1.42
HMGB4Q8WW32 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC6.18□□□□□ -1.42
HMGB4Q8WW32 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC6.18□□□□□ -1.42
HMGB4Q8WW32 AC097467.4-201ENST00000605504 141 ntBASIC6.18□□□□□ -1.42
HMGB4Q8WW32 PPATP2-201ENST00000605635 508 ntBASIC6.18□□□□□ -1.42
HMGB4Q8WW32 MIR6809-201ENST00000612189 116 ntBASIC6.18□□□□□ -1.42
HMGB4Q8WW32 RN7SL787P-201ENST00000613000 284 ntBASIC6.18□□□□□ -1.42
HMGB4Q8WW32 AC004477.3-201ENST00000614061 590 ntBASIC6.18□□□□□ -1.42
HMGB4Q8WW32 AL049767.1-202ENST00000637826 242 ntBASIC6.18□□□□□ -1.42
HMGB4Q8WW32 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
HMGB4Q8WW32 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
HMGB4Q8WW32 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
HMGB4Q8WW32 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
HMGB4Q8WW32 WBP11P1-201ENST00000562560 1931 ntBASIC6.18□□□□□ -1.42
HMGB4Q8WW32 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC6.18□□□□□ -1.42
HMGB4Q8WW32 CIR1P2-201ENST00000514821 1342 ntBASIC6.18□□□□□ -1.42
HMGB4Q8WW32 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC6.18□□□□□ -1.42
HMGB4Q8WW32 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
HMGB4Q8WW32 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC6.18□□□□□ -1.42
HMGB4Q8WW32 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
HMGB4Q8WW32 AC025809.2-201ENST00000625085 1802 ntBASIC6.18□□□□□ -1.42
HMGB4Q8WW32 NEPNP-201ENST00000404786 1371 ntBASIC6.18□□□□□ -1.42
HMGB4Q8WW32 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
HMGB4Q8WW32 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
HMGB4Q8WW32 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
HMGB4Q8WW32 CA1-225ENST00000626824 2405 ntTSL 5 BASIC6.17□□□□□ -1.42
HMGB4Q8WW32 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
HMGB4Q8WW32 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
HMGB4Q8WW32 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
HMGB4Q8WW32 ZNF573-201ENST00000339503 2014 ntTSL 5 BASIC6.17□□□□□ -1.42
HMGB4Q8WW32 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC6.17□□□□□ -1.42
HMGB4Q8WW32 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
HMGB4Q8WW32 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
HMGB4Q8WW32 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
HMGB4Q8WW32 SNORD51.1-201ENST00000365405 77 ntBASIC6.17□□□□□ -1.42
HMGB4Q8WW32 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
HMGB4Q8WW32 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC6.17□□□□□ -1.42
HMGB4Q8WW32 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
HMGB4Q8WW32 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
HMGB4Q8WW32 AC016769.2-201ENST00000414815 475 ntBASIC6.17□□□□□ -1.42
HMGB4Q8WW32 BX284632.2-201ENST00000421091 399 ntBASIC6.17□□□□□ -1.42
HMGB4Q8WW32 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC6.17□□□□□ -1.42
HMGB4Q8WW32 MTCO1P51-201ENST00000427672 1060 ntBASIC6.17□□□□□ -1.42
HMGB4Q8WW32 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC6.17□□□□□ -1.42
HMGB4Q8WW32 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC6.17□□□□□ -1.42
HMGB4Q8WW32 AL512605.1-202ENST00000441919 381 ntBASIC6.17□□□□□ -1.42
HMGB4Q8WW32 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC6.17□□□□□ -1.42
HMGB4Q8WW32 AL359955.2-201ENST00000445380 353 ntBASIC6.17□□□□□ -1.42
HMGB4Q8WW32 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
HMGB4Q8WW32 NPM1P19-201ENST00000450070 712 ntBASIC6.17□□□□□ -1.42
HMGB4Q8WW32 AP000547.1-201ENST00000454360 617 ntBASIC6.17□□□□□ -1.42
HMGB4Q8WW32 AP002345.1-201ENST00000456493 928 ntBASIC6.17□□□□□ -1.42
HMGB4Q8WW32 EIF2S2P4-201ENST00000461070 984 ntBASIC6.17□□□□□ -1.42
HMGB4Q8WW32 RN7SL177P-201ENST00000476596 299 ntBASIC6.17□□□□□ -1.42
HMGB4Q8WW32 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC6.17□□□□□ -1.42
HMGB4Q8WW32 RPS4XP14-201ENST00000493072 781 ntBASIC6.17□□□□□ -1.42
HMGB4Q8WW32 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
HMGB4Q8WW32 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC6.17□□□□□ -1.42
HMGB4Q8WW32 AC027338.1-201ENST00000514840 825 ntBASIC6.17□□□□□ -1.42
HMGB4Q8WW32 IGHVIII-67-4-201ENST00000524281 296 ntBASIC6.17□□□□□ -1.42
HMGB4Q8WW32 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
HMGB4Q8WW32 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC6.17□□□□□ -1.42
HMGB4Q8WW32 AC008147.3-201ENST00000548666 354 ntBASIC6.17□□□□□ -1.42
HMGB4Q8WW32 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC6.17□□□□□ -1.42
HMGB4Q8WW32 SNORD95-201ENST00000579879 68 ntBASIC6.17□□□□□ -1.42
HMGB4Q8WW32 AP001496.3-201ENST00000580230 913 ntBASIC6.17□□□□□ -1.42
HMGB4Q8WW32 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC6.17□□□□□ -1.42
HMGB4Q8WW32 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC6.17□□□□□ -1.42
HMGB4Q8WW32 AP006248.3-201ENST00000623580 594 ntBASIC6.17□□□□□ -1.42
HMGB4Q8WW32 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC6.17□□□□□ -1.42
HMGB4Q8WW32 MAPK10-350ENST00000641777 965 ntBASIC6.17□□□□□ -1.42
HMGB4Q8WW32 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC6.17□□□□□ -1.42
HMGB4Q8WW32 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
HMGB4Q8WW32 AC105235.1-201ENST00000623208 1816 ntBASIC6.17□□□□□ -1.42
HMGB4Q8WW32 AC130360.2-201ENST00000533477 1556 ntBASIC6.17□□□□□ -1.42
HMGB4Q8WW32 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
HMGB4Q8WW32 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC6.17□□□□□ -1.42
HMGB4Q8WW32 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC6.17□□□□□ -1.42
HMGB4Q8WW32 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
HMGB4Q8WW32 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
HMGB4Q8WW32 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
HMGB4Q8WW32 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
HMGB4Q8WW32 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
HMGB4Q8WW32 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC6.16□□□□□ -1.42
HMGB4Q8WW32 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
HMGB4Q8WW32 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC6.16□□□□□ -1.42
HMGB4Q8WW32 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
HMGB4Q8WW32 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC6.16□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 91.6 ms