Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 U3.28-201ENST00000391249 210 ntBASIC5.96□□□□□ -1.46
SHROOM3Q8TF72 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC5.96□□□□□ -1.46
SHROOM3Q8TF72 BX119321.1-201ENST00000428912 797 ntBASIC5.96□□□□□ -1.46
SHROOM3Q8TF72 AL121776.1-201ENST00000429337 372 ntBASIC5.96□□□□□ -1.46
SHROOM3Q8TF72 H3F3BP1-201ENST00000440551 403 ntBASIC5.96□□□□□ -1.46
SHROOM3Q8TF72 TOMM22P4-201ENST00000511318 336 ntBASIC5.96□□□□□ -1.46
SHROOM3Q8TF72 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC5.96□□□□□ -1.46
SHROOM3Q8TF72 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC5.96□□□□□ -1.46
SHROOM3Q8TF72 AC139697.1-201ENST00000548429 745 ntBASIC5.96□□□□□ -1.46
SHROOM3Q8TF72 AC007956.1-201ENST00000555623 542 ntBASIC5.96□□□□□ -1.46
SHROOM3Q8TF72 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC5.96□□□□□ -1.46
SHROOM3Q8TF72 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC5.96□□□□□ -1.46
SHROOM3Q8TF72 U1.25-201ENST00000614085 162 ntBASIC5.96□□□□□ -1.46
SHROOM3Q8TF72 U1.34-201ENST00000618578 162 ntBASIC5.96□□□□□ -1.46
SHROOM3Q8TF72 U1.31-201ENST00000620022 160 ntBASIC5.96□□□□□ -1.46
SHROOM3Q8TF72 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
SHROOM3Q8TF72 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
SHROOM3Q8TF72 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
SHROOM3Q8TF72 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
SHROOM3Q8TF72 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC5.96□□□□□ -1.46
SHROOM3Q8TF72 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC5.96□□□□□ -1.46
SHROOM3Q8TF72 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
SHROOM3Q8TF72 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
SHROOM3Q8TF72 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC5.96□□□□□ -1.46
SHROOM3Q8TF72 TRIP11-201ENST00000267622 9996 ntAPPRIS P2 TSL 1 (best) BASIC5.96□□□□□ -1.46
SHROOM3Q8TF72 KIAA0232-202ENST00000425103 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
SHROOM3Q8TF72 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
SHROOM3Q8TF72 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SHROOM3Q8TF72 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
SHROOM3Q8TF72 DMD-202ENST00000343523 5623 ntTSL 5 BASIC5.95□□□□□ -1.46
SHROOM3Q8TF72 MFSD8-239ENST00000641590 2479 ntBASIC5.95□□□□□ -1.46
SHROOM3Q8TF72 AC140479.2-201ENST00000421567 3130 ntBASIC5.95□□□□□ -1.46
SHROOM3Q8TF72 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC5.95□□□□□ -1.46
SHROOM3Q8TF72 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
SHROOM3Q8TF72 BPHL-201ENST00000380368 797 ntTSL 5 BASIC5.95□□□□□ -1.46
SHROOM3Q8TF72 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC5.95□□□□□ -1.46
SHROOM3Q8TF72 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC5.95□□□□□ -1.46
SHROOM3Q8TF72 AL365220.1-201ENST00000432923 399 ntBASIC5.95□□□□□ -1.46
SHROOM3Q8TF72 H2AFZP6-201ENST00000444403 394 ntBASIC5.95□□□□□ -1.46
SHROOM3Q8TF72 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC5.95□□□□□ -1.46
SHROOM3Q8TF72 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC5.95□□□□□ -1.46
SHROOM3Q8TF72 RPS3AP15-201ENST00000483874 781 ntBASIC5.95□□□□□ -1.46
SHROOM3Q8TF72 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC5.95□□□□□ -1.46
SHROOM3Q8TF72 AC109439.2-201ENST00000502421 564 ntTSL 4 BASIC5.95□□□□□ -1.46
SHROOM3Q8TF72 LINC01151-201ENST00000521608 571 ntTSL 4 BASIC5.95□□□□□ -1.46
SHROOM3Q8TF72 IGKV2-18-201ENST00000522607 343 ntBASIC5.95□□□□□ -1.46
SHROOM3Q8TF72 HMGN2P36-201ENST00000529541 409 ntBASIC5.95□□□□□ -1.46
SHROOM3Q8TF72 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC5.95□□□□□ -1.46
SHROOM3Q8TF72 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC5.95□□□□□ -1.46
SHROOM3Q8TF72 AC096996.1-201ENST00000563813 325 ntBASIC5.95□□□□□ -1.46
SHROOM3Q8TF72 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC5.95□□□□□ -1.46
SHROOM3Q8TF72 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC5.95□□□□□ -1.46
SHROOM3Q8TF72 AL133481.2-203ENST00000607558 139 ntBASIC5.95□□□□□ -1.46
SHROOM3Q8TF72 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC5.95□□□□□ -1.46
SHROOM3Q8TF72 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC5.95□□□□□ -1.46
SHROOM3Q8TF72 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
SHROOM3Q8TF72 MC4R-201ENST00000299766 1666 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
SHROOM3Q8TF72 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC5.95□□□□□ -1.46
SHROOM3Q8TF72 AC015689.2-201ENST00000528172 1738 ntBASIC5.95□□□□□ -1.46
SHROOM3Q8TF72 LIPA-203ENST00000371837 2513 ntTSL 2 BASIC5.95□□□□□ -1.46
SHROOM3Q8TF72 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SHROOM3Q8TF72 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
SHROOM3Q8TF72 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC5.95□□□□□ -1.46
SHROOM3Q8TF72 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
SHROOM3Q8TF72 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC5.95□□□□□ -1.46
SHROOM3Q8TF72 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC5.95□□□□□ -1.46
SHROOM3Q8TF72 AL121886.1-201ENST00000358609 435 ntBASIC5.95□□□□□ -1.46
SHROOM3Q8TF72 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
SHROOM3Q8TF72 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.95□□□□□ -1.46
SHROOM3Q8TF72 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC5.95□□□□□ -1.46
SHROOM3Q8TF72 RPL34P3-201ENST00000421454 338 ntBASIC5.95□□□□□ -1.46
SHROOM3Q8TF72 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC5.95□□□□□ -1.46
SHROOM3Q8TF72 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC5.95□□□□□ -1.46
SHROOM3Q8TF72 USP24P1-201ENST00000433802 779 ntBASIC5.95□□□□□ -1.46
SHROOM3Q8TF72 AC006335.2-201ENST00000437993 330 ntBASIC5.95□□□□□ -1.46
SHROOM3Q8TF72 ELOCP3-201ENST00000439303 348 ntBASIC5.95□□□□□ -1.46
SHROOM3Q8TF72 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC5.95□□□□□ -1.46
SHROOM3Q8TF72 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC5.95□□□□□ -1.46
SHROOM3Q8TF72 RNA5SP438-201ENST00000516561 112 ntBASIC5.95□□□□□ -1.46
SHROOM3Q8TF72 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC5.95□□□□□ -1.46
SHROOM3Q8TF72 AC018558.5-201ENST00000565840 952 ntBASIC5.95□□□□□ -1.46
SHROOM3Q8TF72 MIR3691-201ENST00000578066 90 ntBASIC5.95□□□□□ -1.46
SHROOM3Q8TF72 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC5.95□□□□□ -1.46
SHROOM3Q8TF72 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC5.95□□□□□ -1.46
SHROOM3Q8TF72 SLC26A5-205ENST00000393723 2174 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SHROOM3Q8TF72 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SHROOM3Q8TF72 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC5.94□□□□□ -1.46
SHROOM3Q8TF72 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
SHROOM3Q8TF72 AC027088.4-201ENST00000611559 1947 ntBASIC5.94□□□□□ -1.46
SHROOM3Q8TF72 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
SHROOM3Q8TF72 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
SHROOM3Q8TF72 SELE-204ENST00000367776 3576 ntTSL 5 BASIC5.94□□□□□ -1.46
SHROOM3Q8TF72 STK3-216ENST00000523601 3107 ntTSL 2 BASIC5.94□□□□□ -1.46
SHROOM3Q8TF72 NLN-202ENST00000502464 8354 ntTSL 5 BASIC5.94□□□□□ -1.46
SHROOM3Q8TF72 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC5.94□□□□□ -1.46
SHROOM3Q8TF72 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SHROOM3Q8TF72 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SHROOM3Q8TF72 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC5.94□□□□□ -1.46
SHROOM3Q8TF72 RN7SKP151-201ENST00000410230 316 ntBASIC5.94□□□□□ -1.46
SHROOM3Q8TF72 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC5.94□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 137.2 ms