Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CCDC65Q8IXS2 AC004129.2-201ENST00000457229 287 ntBASIC6.48□□□□□ -1.37
CCDC65Q8IXS2 snoU13.29-201ENST00000459370 104 ntBASIC6.48□□□□□ -1.37
CCDC65Q8IXS2 AP002884.1-201ENST00000479691 655 ntBASIC6.48□□□□□ -1.37
CCDC65Q8IXS2 RN7SL170P-201ENST00000487098 295 ntBASIC6.48□□□□□ -1.37
CCDC65Q8IXS2 RN7SL57P-201ENST00000493687 290 ntBASIC6.48□□□□□ -1.37
CCDC65Q8IXS2 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC6.48□□□□□ -1.37
CCDC65Q8IXS2 AC027369.2-201ENST00000528030 440 ntBASIC6.48□□□□□ -1.37
CCDC65Q8IXS2 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC6.48□□□□□ -1.37
CCDC65Q8IXS2 PCNAP4-201ENST00000532690 730 ntBASIC6.48□□□□□ -1.37
CCDC65Q8IXS2 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC6.48□□□□□ -1.37
CCDC65Q8IXS2 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC6.48□□□□□ -1.37
CCDC65Q8IXS2 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC6.48□□□□□ -1.37
CCDC65Q8IXS2 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC6.48□□□□□ -1.37
CCDC65Q8IXS2 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC6.48□□□□□ -1.37
CCDC65Q8IXS2 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC6.48□□□□□ -1.37
CCDC65Q8IXS2 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC6.48□□□□□ -1.37
CCDC65Q8IXS2 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CCDC65Q8IXS2 AL513327.3-201ENST00000602618 469 ntBASIC6.48□□□□□ -1.37
CCDC65Q8IXS2 AC024884.1-201ENST00000620583 399 ntBASIC6.48□□□□□ -1.37
CCDC65Q8IXS2 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC6.48□□□□□ -1.37
CCDC65Q8IXS2 UGP2-232ENST00000640075 567 ntTSL 5 BASIC6.48□□□□□ -1.37
CCDC65Q8IXS2 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CCDC65Q8IXS2 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CCDC65Q8IXS2 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC6.48□□□□□ -1.37
CCDC65Q8IXS2 IFIT1P1-201ENST00000400497 1449 ntBASIC6.48□□□□□ -1.37
CCDC65Q8IXS2 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC6.48□□□□□ -1.37
CCDC65Q8IXS2 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC6.48□□□□□ -1.37
CCDC65Q8IXS2 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
CCDC65Q8IXS2 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC6.48□□□□□ -1.37
CCDC65Q8IXS2 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC6.48□□□□□ -1.37
CCDC65Q8IXS2 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
CCDC65Q8IXS2 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
CCDC65Q8IXS2 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
CCDC65Q8IXS2 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC6.47□□□□□ -1.37
CCDC65Q8IXS2 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC6.47□□□□□ -1.37
CCDC65Q8IXS2 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC6.47□□□□□ -1.37
CCDC65Q8IXS2 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC6.47□□□□□ -1.37
CCDC65Q8IXS2 PDZK1P1-202ENST00000425209 1350 ntBASIC6.47□□□□□ -1.37
CCDC65Q8IXS2 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC6.47□□□□□ -1.37
CCDC65Q8IXS2 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
CCDC65Q8IXS2 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
CCDC65Q8IXS2 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CCDC65Q8IXS2 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CCDC65Q8IXS2 AC004386.1-201ENST00000393214 761 ntBASIC6.47□□□□□ -1.37
CCDC65Q8IXS2 RPL11P3-201ENST00000395256 523 ntBASIC6.47□□□□□ -1.37
CCDC65Q8IXS2 AC099535.1-201ENST00000408928 371 ntBASIC6.47□□□□□ -1.37
CCDC65Q8IXS2 FIGN-202ENST00000409634 746 ntTSL 5 BASIC6.47□□□□□ -1.37
CCDC65Q8IXS2 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC6.47□□□□□ -1.37
CCDC65Q8IXS2 AC019205.1-201ENST00000421830 730 ntBASIC6.47□□□□□ -1.37
CCDC65Q8IXS2 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC6.47□□□□□ -1.37
CCDC65Q8IXS2 EIF5AP4-201ENST00000441206 465 ntBASIC6.47□□□□□ -1.37
CCDC65Q8IXS2 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC6.47□□□□□ -1.37
CCDC65Q8IXS2 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC6.47□□□□□ -1.37
CCDC65Q8IXS2 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC6.47□□□□□ -1.37
CCDC65Q8IXS2 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC6.47□□□□□ -1.37
CCDC65Q8IXS2 AC025458.1-201ENST00000506046 166 ntBASIC6.47□□□□□ -1.37
CCDC65Q8IXS2 CETN3-206ENST00000522864 738 ntTSL 3 BASIC6.47□□□□□ -1.37
CCDC65Q8IXS2 AC006530.1-201ENST00000555980 571 ntBASIC6.47□□□□□ -1.37
CCDC65Q8IXS2 AL356801.1-201ENST00000559320 294 ntBASIC6.47□□□□□ -1.37
CCDC65Q8IXS2 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC6.47□□□□□ -1.37
CCDC65Q8IXS2 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC6.47□□□□□ -1.37
CCDC65Q8IXS2 LINC00556-201ENST00000569603 412 ntBASIC6.47□□□□□ -1.37
CCDC65Q8IXS2 MIR4271-201ENST00000582451 67 ntBASIC6.47□□□□□ -1.37
CCDC65Q8IXS2 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC6.47□□□□□ -1.37
CCDC65Q8IXS2 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC6.47□□□□□ -1.37
CCDC65Q8IXS2 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC6.47□□□□□ -1.37
CCDC65Q8IXS2 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
CCDC65Q8IXS2 AC099654.11-201ENST00000638857 294 ntBASIC6.47□□□□□ -1.37
CCDC65Q8IXS2 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC6.47□□□□□ -1.37
CCDC65Q8IXS2 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
CCDC65Q8IXS2 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CCDC65Q8IXS2 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
CCDC65Q8IXS2 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC6.47□□□□□ -1.37
CCDC65Q8IXS2 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.37
CCDC65Q8IXS2 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
CCDC65Q8IXS2 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.37
CCDC65Q8IXS2 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC6.46□□□□□ -1.37
CCDC65Q8IXS2 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
CCDC65Q8IXS2 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
CCDC65Q8IXS2 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
CCDC65Q8IXS2 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC6.46□□□□□ -1.38
CCDC65Q8IXS2 AC110602.1-201ENST00000437414 318 ntBASIC6.46□□□□□ -1.38
CCDC65Q8IXS2 PPIA-203ENST00000451562 544 ntTSL 2 BASIC6.46□□□□□ -1.38
CCDC65Q8IXS2 RPL37P23-201ENST00000492641 294 ntBASIC6.46□□□□□ -1.38
CCDC65Q8IXS2 ST13P12-201ENST00000508958 1094 ntBASIC6.46□□□□□ -1.38
CCDC65Q8IXS2 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC6.46□□□□□ -1.38
CCDC65Q8IXS2 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC6.46□□□□□ -1.38
CCDC65Q8IXS2 AC060780.2-201ENST00000589047 198 ntBASIC6.46□□□□□ -1.38
CCDC65Q8IXS2 AL158152.1-201ENST00000602652 1435 ntBASIC6.46□□□□□ -1.38
CCDC65Q8IXS2 AC129778.1-202ENST00000623812 261 ntBASIC6.46□□□□□ -1.38
CCDC65Q8IXS2 AL137058.3-201ENST00000624531 3099 ntBASIC6.46□□□□□ -1.38
CCDC65Q8IXS2 AC069542.2-201ENST00000624816 216 ntBASIC6.46□□□□□ -1.38
CCDC65Q8IXS2 AL591379.1-207ENST00000635982 261 ntBASIC6.46□□□□□ -1.38
CCDC65Q8IXS2 AMYH02020865.1-205ENST00000636189 261 ntBASIC6.46□□□□□ -1.38
CCDC65Q8IXS2 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC6.46□□□□□ -1.38
CCDC65Q8IXS2 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
CCDC65Q8IXS2 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC6.46□□□□□ -1.38
CCDC65Q8IXS2 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
CCDC65Q8IXS2 AC092070.2-203ENST00000598377 3644 ntBASIC6.46□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms