Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
LRRC28Q86X40 AL022311.1-201ENST00000623726 19416 ntBASIC5.22□□□□□ -1.57
LRRC28Q86X40 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
LRRC28Q86X40 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.22□□□□□ -1.57
LRRC28Q86X40 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC5.22□□□□□ -1.57
LRRC28Q86X40 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
LRRC28Q86X40 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
LRRC28Q86X40 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.57
LRRC28Q86X40 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
LRRC28Q86X40 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.21□□□□□ -1.57
LRRC28Q86X40 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
LRRC28Q86X40 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
LRRC28Q86X40 BRAFP1-201ENST00000445336 2703 ntBASIC5.21□□□□□ -1.58
LRRC28Q86X40 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.21□□□□□ -1.58
LRRC28Q86X40 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
LRRC28Q86X40 RPS2P45-201ENST00000469997 2057 ntBASIC5.21□□□□□ -1.58
LRRC28Q86X40 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
LRRC28Q86X40 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.21□□□□□ -1.58
LRRC28Q86X40 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC5.21□□□□□ -1.58
LRRC28Q86X40 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC5.21□□□□□ -1.58
LRRC28Q86X40 CRIP1P1-201ENST00000427567 185 ntBASIC5.21□□□□□ -1.58
LRRC28Q86X40 AC069154.1-201ENST00000432914 542 ntBASIC5.21□□□□□ -1.58
LRRC28Q86X40 AC097463.1-201ENST00000447288 481 ntBASIC5.21□□□□□ -1.58
LRRC28Q86X40 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC5.21□□□□□ -1.58
LRRC28Q86X40 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC5.21□□□□□ -1.58
LRRC28Q86X40 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC5.21□□□□□ -1.58
LRRC28Q86X40 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC5.21□□□□□ -1.58
LRRC28Q86X40 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC5.21□□□□□ -1.58
LRRC28Q86X40 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.21□□□□□ -1.58
LRRC28Q86X40 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC5.21□□□□□ -1.58
LRRC28Q86X40 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.21□□□□□ -1.58
LRRC28Q86X40 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC5.21□□□□□ -1.58
LRRC28Q86X40 AC092332.1-201ENST00000563684 829 ntBASIC5.21□□□□□ -1.58
LRRC28Q86X40 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
LRRC28Q86X40 TXNP4-201ENST00000575018 310 ntBASIC5.21□□□□□ -1.58
LRRC28Q86X40 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC5.21□□□□□ -1.58
LRRC28Q86X40 AC119403.2-201ENST00000590960 598 ntBASIC5.21□□□□□ -1.58
LRRC28Q86X40 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC5.21□□□□□ -1.58
LRRC28Q86X40 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC5.21□□□□□ -1.58
LRRC28Q86X40 AL513327.3-201ENST00000602618 469 ntBASIC5.21□□□□□ -1.58
LRRC28Q86X40 AL499605.1-201ENST00000604628 403 ntBASIC5.21□□□□□ -1.58
LRRC28Q86X40 FAM27E2-201ENST00000619668 403 ntBASIC5.21□□□□□ -1.58
LRRC28Q86X40 OXSM-209ENST00000626005 309 ntTSL 3 BASIC5.21□□□□□ -1.58
LRRC28Q86X40 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC5.21□□□□□ -1.58
LRRC28Q86X40 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC5.21□□□□□ -1.58
LRRC28Q86X40 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC5.21□□□□□ -1.58
LRRC28Q86X40 AL133243.2-201ENST00000610331 1621 ntBASIC5.21□□□□□ -1.58
LRRC28Q86X40 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
LRRC28Q86X40 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
LRRC28Q86X40 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
LRRC28Q86X40 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.21□□□□□ -1.58
LRRC28Q86X40 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
LRRC28Q86X40 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC5.21□□□□□ -1.58
LRRC28Q86X40 AL137058.3-201ENST00000624531 3099 ntBASIC5.21□□□□□ -1.58
LRRC28Q86X40 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC5.21□□□□□ -1.58
LRRC28Q86X40 IFIT1P1-201ENST00000400497 1449 ntBASIC5.21□□□□□ -1.58
LRRC28Q86X40 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC5.21□□□□□ -1.58
LRRC28Q86X40 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.21□□□□□ -1.58
LRRC28Q86X40 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
LRRC28Q86X40 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC5.21□□□□□ -1.58
LRRC28Q86X40 MAPK10-338ENST00000641647 3362 ntBASIC5.21□□□□□ -1.58
LRRC28Q86X40 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC5.21□□□□□ -1.58
LRRC28Q86X40 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC5.21□□□□□ -1.58
LRRC28Q86X40 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.2□□□□□ -1.58
LRRC28Q86X40 AC002525.1-201ENST00000624392 1622 ntBASIC5.2□□□□□ -1.58
LRRC28Q86X40 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
LRRC28Q86X40 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
LRRC28Q86X40 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
LRRC28Q86X40 RNA5SP433-201ENST00000364491 114 ntBASIC5.2□□□□□ -1.58
LRRC28Q86X40 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
LRRC28Q86X40 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
LRRC28Q86X40 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC5.2□□□□□ -1.58
LRRC28Q86X40 AC130360.1-201ENST00000425489 1117 ntBASIC5.2□□□□□ -1.58
LRRC28Q86X40 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC5.2□□□□□ -1.58
LRRC28Q86X40 PNKDP1-201ENST00000435914 430 ntBASIC5.2□□□□□ -1.58
LRRC28Q86X40 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
LRRC28Q86X40 OR3D1P-201ENST00000438288 955 ntBASIC5.2□□□□□ -1.58
LRRC28Q86X40 AL138899.2-201ENST00000439139 499 ntBASIC5.2□□□□□ -1.58
LRRC28Q86X40 PCNPP2-201ENST00000441651 455 ntBASIC5.2□□□□□ -1.58
LRRC28Q86X40 RPL6P30-201ENST00000443382 862 ntBASIC5.2□□□□□ -1.58
LRRC28Q86X40 PFN1P8-201ENST00000497012 543 ntBASIC5.2□□□□□ -1.58
LRRC28Q86X40 Y_RNA.710-201ENST00000516975 110 ntBASIC5.2□□□□□ -1.58
LRRC28Q86X40 IGKV1OR22-1-201ENST00000521497 360 ntBASIC5.2□□□□□ -1.58
LRRC28Q86X40 AC138832.1-201ENST00000522871 556 ntBASIC5.2□□□□□ -1.58
LRRC28Q86X40 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC5.2□□□□□ -1.58
LRRC28Q86X40 AC130365.2-201ENST00000525882 1201 ntBASIC5.2□□□□□ -1.58
LRRC28Q86X40 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.2□□□□□ -1.58
LRRC28Q86X40 MED21-206ENST00000546323 575 ntTSL 3 BASIC5.2□□□□□ -1.58
LRRC28Q86X40 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC5.2□□□□□ -1.58
LRRC28Q86X40 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC5.2□□□□□ -1.58
LRRC28Q86X40 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC5.2□□□□□ -1.58
LRRC28Q86X40 AC091167.5-201ENST00000605689 894 ntBASIC5.2□□□□□ -1.58
LRRC28Q86X40 AL591167.1-201ENST00000607321 456 ntBASIC5.2□□□□□ -1.58
LRRC28Q86X40 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC5.2□□□□□ -1.58
LRRC28Q86X40 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC5.2□□□□□ -1.58
LRRC28Q86X40 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
LRRC28Q86X40 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
LRRC28Q86X40 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.2□□□□□ -1.58
LRRC28Q86X40 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
LRRC28Q86X40 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms