Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 AC021876.1-201ENST00000425959 359 ntBASIC5.8□□□□□ -1.48
PTCHD4Q6ZW05 MGAT2P2-201ENST00000427194 797 ntBASIC5.8□□□□□ -1.48
PTCHD4Q6ZW05 RPL3P11-201ENST00000434028 1146 ntBASIC5.8□□□□□ -1.48
PTCHD4Q6ZW05 AL845321.1-201ENST00000444603 348 ntBASIC5.8□□□□□ -1.48
PTCHD4Q6ZW05 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC5.8□□□□□ -1.48
PTCHD4Q6ZW05 UBBP5-201ENST00000446970 266 ntBASIC5.8□□□□□ -1.48
PTCHD4Q6ZW05 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC5.8□□□□□ -1.48
PTCHD4Q6ZW05 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC5.8□□□□□ -1.48
PTCHD4Q6ZW05 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC5.8□□□□□ -1.48
PTCHD4Q6ZW05 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC5.8□□□□□ -1.48
PTCHD4Q6ZW05 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC5.8□□□□□ -1.48
PTCHD4Q6ZW05 AC239804.1-201ENST00000466343 869 ntTSL 5 BASIC5.8□□□□□ -1.48
PTCHD4Q6ZW05 CR383656.1-201ENST00000484916 377 ntBASIC5.8□□□□□ -1.48
PTCHD4Q6ZW05 AC131392.1-201ENST00000506490 633 ntBASIC5.8□□□□□ -1.48
PTCHD4Q6ZW05 AC097451.1-201ENST00000507388 653 ntTSL 3 BASIC5.8□□□□□ -1.48
PTCHD4Q6ZW05 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC5.8□□□□□ -1.48
PTCHD4Q6ZW05 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC5.8□□□□□ -1.48
PTCHD4Q6ZW05 AC111000.6-201ENST00000514471 709 ntBASIC5.8□□□□□ -1.48
PTCHD4Q6ZW05 AC010834.1-201ENST00000517998 696 ntTSL 2 BASIC5.8□□□□□ -1.48
PTCHD4Q6ZW05 AC023866.2-201ENST00000521378 387 ntTSL 3 BASIC5.8□□□□□ -1.48
PTCHD4Q6ZW05 OR4A41P-201ENST00000533053 928 ntBASIC5.8□□□□□ -1.48
PTCHD4Q6ZW05 HNRNPCP1-201ENST00000556181 766 ntBASIC5.8□□□□□ -1.48
PTCHD4Q6ZW05 HNRNPA1P74-201ENST00000560782 835 ntBASIC5.8□□□□□ -1.48
PTCHD4Q6ZW05 AC009120.3-201ENST00000563335 499 ntBASIC5.8□□□□□ -1.48
PTCHD4Q6ZW05 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC5.8□□□□□ -1.48
PTCHD4Q6ZW05 AC126323.5-201ENST00000569913 592 ntTSL 3 BASIC5.8□□□□□ -1.48
PTCHD4Q6ZW05 C17orf80-208ENST00000582793 531 ntTSL 2 BASIC5.8□□□□□ -1.48
PTCHD4Q6ZW05 AC098847.2-201ENST00000588088 528 ntTSL 5 BASIC5.8□□□□□ -1.48
PTCHD4Q6ZW05 AC008507.2-201ENST00000588402 1176 ntBASIC5.8□□□□□ -1.48
PTCHD4Q6ZW05 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC5.8□□□□□ -1.48
PTCHD4Q6ZW05 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC5.8□□□□□ -1.48
PTCHD4Q6ZW05 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC5.8□□□□□ -1.48
PTCHD4Q6ZW05 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC5.8□□□□□ -1.48
PTCHD4Q6ZW05 AC011492.1-201ENST00000600023 315 ntBASIC5.8□□□□□ -1.48
PTCHD4Q6ZW05 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC5.8□□□□□ -1.48
PTCHD4Q6ZW05 RPS4XP21-201ENST00000603814 750 ntBASIC5.8□□□□□ -1.48
PTCHD4Q6ZW05 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC5.8□□□□□ -1.48
PTCHD4Q6ZW05 AC090617.9-201ENST00000623751 147 ntBASIC5.8□□□□□ -1.48
PTCHD4Q6ZW05 SAMD12-AS1-201ENST00000625758 718 ntTSL 5 BASIC5.8□□□□□ -1.48
PTCHD4Q6ZW05 AL590396.4-201ENST00000636779 956 ntBASIC5.8□□□□□ -1.48
PTCHD4Q6ZW05 AL121839.2-201ENST00000565058 6943 ntBASIC5.8□□□□□ -1.48
PTCHD4Q6ZW05 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
PTCHD4Q6ZW05 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
PTCHD4Q6ZW05 SAGE3P-201ENST00000619800 1635 ntBASIC5.8□□□□□ -1.48
PTCHD4Q6ZW05 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
PTCHD4Q6ZW05 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PTCHD4Q6ZW05 OR5M2P-202ENST00000641241 4242 ntBASIC5.8□□□□□ -1.48
PTCHD4Q6ZW05 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC5.8□□□□□ -1.48
PTCHD4Q6ZW05 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
PTCHD4Q6ZW05 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC5.8□□□□□ -1.48
PTCHD4Q6ZW05 MS4A6A-213ENST00000530839 1383 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
PTCHD4Q6ZW05 MAK-205ENST00000538030 2459 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PTCHD4Q6ZW05 AC083837.1-201ENST00000565297 2994 ntBASIC5.79□□□□□ -1.48
PTCHD4Q6ZW05 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PTCHD4Q6ZW05 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
PTCHD4Q6ZW05 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
PTCHD4Q6ZW05 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.79□□□□□ -1.48
PTCHD4Q6ZW05 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PTCHD4Q6ZW05 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PTCHD4Q6ZW05 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC5.79□□□□□ -1.48
PTCHD4Q6ZW05 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC5.79□□□□□ -1.48
PTCHD4Q6ZW05 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
PTCHD4Q6ZW05 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
PTCHD4Q6ZW05 OR4F17-201ENST00000318050 1054 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
PTCHD4Q6ZW05 PPIAP24-201ENST00000328558 471 ntBASIC5.79□□□□□ -1.48
PTCHD4Q6ZW05 OR4F5-201ENST00000335137 1054 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
PTCHD4Q6ZW05 RNA5-8SP5-201ENST00000365304 152 ntBASIC5.79□□□□□ -1.48
PTCHD4Q6ZW05 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PTCHD4Q6ZW05 TRAV27-201ENST00000390457 425 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
PTCHD4Q6ZW05 AL139100.1-201ENST00000408001 498 ntBASIC5.79□□□□□ -1.48
PTCHD4Q6ZW05 TCEA1P2-201ENST00000420496 906 ntBASIC5.79□□□□□ -1.48
PTCHD4Q6ZW05 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC5.79□□□□□ -1.48
PTCHD4Q6ZW05 AL390879.1-201ENST00000439143 386 ntBASIC5.79□□□□□ -1.48
PTCHD4Q6ZW05 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC5.79□□□□□ -1.48
PTCHD4Q6ZW05 REG1CP-206ENST00000447469 496 ntBASIC5.79□□□□□ -1.48
PTCHD4Q6ZW05 LIX1L-AS1-206ENST00000447686 846 ntTSL 2 BASIC5.79□□□□□ -1.48
PTCHD4Q6ZW05 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC5.79□□□□□ -1.48
PTCHD4Q6ZW05 AL157896.1-201ENST00000451617 790 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PTCHD4Q6ZW05 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC5.79□□□□□ -1.48
PTCHD4Q6ZW05 RPS3AP49-201ENST00000472161 790 ntBASIC5.79□□□□□ -1.48
PTCHD4Q6ZW05 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
PTCHD4Q6ZW05 RPL19P11-201ENST00000495944 589 ntBASIC5.79□□□□□ -1.48
PTCHD4Q6ZW05 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC5.79□□□□□ -1.48
PTCHD4Q6ZW05 AC093534.1-201ENST00000504977 132 ntBASIC5.79□□□□□ -1.48
PTCHD4Q6ZW05 AC069306.1-201ENST00000507006 843 ntBASIC5.79□□□□□ -1.48
PTCHD4Q6ZW05 SNX18P25-201ENST00000510539 758 ntBASIC5.79□□□□□ -1.48
PTCHD4Q6ZW05 CFI-204ENST00000510800 667 ntTSL 2 BASIC5.79□□□□□ -1.48
PTCHD4Q6ZW05 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC5.79□□□□□ -1.48
PTCHD4Q6ZW05 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC5.79□□□□□ -1.48
PTCHD4Q6ZW05 AC103831.1-201ENST00000522228 422 ntTSL 3 BASIC5.79□□□□□ -1.48
PTCHD4Q6ZW05 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC5.79□□□□□ -1.48
PTCHD4Q6ZW05 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC5.79□□□□□ -1.48
PTCHD4Q6ZW05 TPRXL-210ENST00000532753 478 ntTSL 4 BASIC5.79□□□□□ -1.48
PTCHD4Q6ZW05 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC5.79□□□□□ -1.48
PTCHD4Q6ZW05 AGGF1P9-201ENST00000561884 913 ntBASIC5.79□□□□□ -1.48
PTCHD4Q6ZW05 MED31-202ENST00000574128 619 ntTSL 3 BASIC5.79□□□□□ -1.48
PTCHD4Q6ZW05 GLYATL1P2-202ENST00000588046 902 ntBASIC5.79□□□□□ -1.48
PTCHD4Q6ZW05 AL136084.2-222ENST00000589105 885 ntTSL 5 BASIC5.79□□□□□ -1.48
PTCHD4Q6ZW05 MTCO2P2-201ENST00000591258 225 ntBASIC5.79□□□□□ -1.48
PTCHD4Q6ZW05 ZNF415-218ENST00000599261 601 ntTSL 3 BASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms