Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC5.88□□□□□ -1.47
HNF4AP41235 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC5.88□□□□□ -1.47
HNF4AP41235 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
HNF4AP41235 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
HNF4AP41235 ATP5A1P4-201ENST00000556888 1605 ntBASIC5.88□□□□□ -1.47
HNF4AP41235 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.88□□□□□ -1.47
HNF4AP41235 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.88□□□□□ -1.47
HNF4AP41235 AC140134.1-201ENST00000511830 3544 ntBASIC5.87□□□□□ -1.47
HNF4AP41235 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.87□□□□□ -1.47
HNF4AP41235 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
HNF4AP41235 AL034546.1-201ENST00000623740 3693 ntBASIC5.87□□□□□ -1.47
HNF4AP41235 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
HNF4AP41235 RNA5SP110-201ENST00000362638 115 ntBASIC5.87□□□□□ -1.47
HNF4AP41235 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
HNF4AP41235 AL132875.1-201ENST00000403623 949 ntBASIC5.87□□□□□ -1.47
HNF4AP41235 RN7SKP108-201ENST00000411367 328 ntBASIC5.87□□□□□ -1.47
HNF4AP41235 MTATP6P19-201ENST00000413797 659 ntBASIC5.87□□□□□ -1.47
HNF4AP41235 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC5.87□□□□□ -1.47
HNF4AP41235 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC5.87□□□□□ -1.47
HNF4AP41235 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC5.87□□□□□ -1.47
HNF4AP41235 AL512593.1-201ENST00000444758 779 ntBASIC5.87□□□□□ -1.47
HNF4AP41235 HMGB1P7-201ENST00000450921 612 ntBASIC5.87□□□□□ -1.47
HNF4AP41235 RN7SL254P-201ENST00000460609 284 ntBASIC5.87□□□□□ -1.47
HNF4AP41235 PFN2-209ENST00000481275 560 ntTSL 4 BASIC5.87□□□□□ -1.47
HNF4AP41235 AC124945.1-201ENST00000485133 188 ntBASIC5.87□□□□□ -1.47
HNF4AP41235 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
HNF4AP41235 UGT2A3P7-201ENST00000510485 734 ntBASIC5.87□□□□□ -1.47
HNF4AP41235 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC5.87□□□□□ -1.47
HNF4AP41235 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC5.87□□□□□ -1.47
HNF4AP41235 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC5.87□□□□□ -1.47
HNF4AP41235 AL049779.3-201ENST00000557141 606 ntBASIC5.87□□□□□ -1.47
HNF4AP41235 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC5.87□□□□□ -1.47
HNF4AP41235 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC5.87□□□□□ -1.47
HNF4AP41235 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC5.87□□□□□ -1.47
HNF4AP41235 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC5.87□□□□□ -1.47
HNF4AP41235 MTND2P13-201ENST00000577438 1039 ntBASIC5.87□□□□□ -1.47
HNF4AP41235 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC5.87□□□□□ -1.47
HNF4AP41235 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
HNF4AP41235 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC5.87□□□□□ -1.47
HNF4AP41235 AC119403.2-201ENST00000590960 598 ntBASIC5.87□□□□□ -1.47
HNF4AP41235 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC5.87□□□□□ -1.47
HNF4AP41235 AC009779.8-202ENST00000607990 932 ntBASIC5.87□□□□□ -1.47
HNF4AP41235 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC5.87□□□□□ -1.47
HNF4AP41235 OSBPL9P1-201ENST00000604744 1469 ntBASIC5.87□□□□□ -1.47
HNF4AP41235 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.87□□□□□ -1.47
HNF4AP41235 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
HNF4AP41235 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC5.87□□□□□ -1.47
HNF4AP41235 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC5.87□□□□□ -1.47
HNF4AP41235 AL121839.2-201ENST00000565058 6943 ntBASIC5.87□□□□□ -1.47
HNF4AP41235 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.87□□□□□ -1.47
HNF4AP41235 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
HNF4AP41235 DCN-218ENST00000551354 2924 ntTSL 3 BASIC5.87□□□□□ -1.47
HNF4AP41235 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
HNF4AP41235 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
HNF4AP41235 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC5.86□□□□□ -1.47
HNF4AP41235 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
HNF4AP41235 AC097461.1-201ENST00000568928 2821 ntBASIC5.86□□□□□ -1.47
HNF4AP41235 AC022325.1-201ENST00000502748 2199 ntBASIC5.86□□□□□ -1.47
HNF4AP41235 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
HNF4AP41235 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.86□□□□□ -1.47
HNF4AP41235 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.86□□□□□ -1.47
HNF4AP41235 OR10AB1P-202ENST00000641219 1686 ntBASIC5.86□□□□□ -1.47
HNF4AP41235 UGT2B24P-201ENST00000514441 1597 ntBASIC5.86□□□□□ -1.47
HNF4AP41235 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
HNF4AP41235 GNG5P2-201ENST00000372054 207 ntBASIC5.86□□□□□ -1.47
HNF4AP41235 SNORA77.2-201ENST00000408571 112 ntBASIC5.86□□□□□ -1.47
HNF4AP41235 RPL35AP31-201ENST00000418340 337 ntBASIC5.86□□□□□ -1.47
HNF4AP41235 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC5.86□□□□□ -1.47
HNF4AP41235 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC5.86□□□□□ -1.47
HNF4AP41235 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC5.86□□□□□ -1.47
HNF4AP41235 RPL12P12-201ENST00000424633 501 ntBASIC5.86□□□□□ -1.47
HNF4AP41235 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC5.86□□□□□ -1.47
HNF4AP41235 CCNB1IP1P1-201ENST00000428976 839 ntBASIC5.86□□□□□ -1.47
HNF4AP41235 PPIA-203ENST00000451562 544 ntTSL 2 BASIC5.86□□□□□ -1.47
HNF4AP41235 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC5.86□□□□□ -1.47
HNF4AP41235 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC5.86□□□□□ -1.47
HNF4AP41235 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC5.86□□□□□ -1.47
HNF4AP41235 SEPT14P1-201ENST00000458703 648 ntBASIC5.86□□□□□ -1.47
HNF4AP41235 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC5.86□□□□□ -1.47
HNF4AP41235 CCDC11P1-201ENST00000503137 1162 ntBASIC5.86□□□□□ -1.47
HNF4AP41235 AC018797.1-201ENST00000510791 255 ntBASIC5.86□□□□□ -1.47
HNF4AP41235 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC5.86□□□□□ -1.47
HNF4AP41235 BICD1-206ENST00000551086 423 ntTSL 3 BASIC5.86□□□□□ -1.47
HNF4AP41235 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC5.86□□□□□ -1.47
HNF4AP41235 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC5.86□□□□□ -1.47
HNF4AP41235 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC5.86□□□□□ -1.47
HNF4AP41235 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC5.86□□□□□ -1.47
HNF4AP41235 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
HNF4AP41235 MIR6806-201ENST00000622141 64 ntBASIC5.86□□□□□ -1.47
HNF4AP41235 AC123769.1-201ENST00000530992 3192 ntBASIC5.86□□□□□ -1.47
HNF4AP41235 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
HNF4AP41235 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC5.86□□□□□ -1.47
HNF4AP41235 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
HNF4AP41235 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
HNF4AP41235 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
HNF4AP41235 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
HNF4AP41235 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
HNF4AP41235 SELE-204ENST00000367776 3576 ntTSL 5 BASIC5.86□□□□□ -1.47
HNF4AP41235 SELE-205ENST00000367777 3576 ntTSL 5 BASIC5.86□□□□□ -1.47
HNF4AP41235 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms