Protein–RNA interactions for Protein: P35499

SCN4A, Sodium channel protein type 4 subunit alpha, humanhuman

Predictions only

Length 1,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4AP35499 AC092106.1-201ENST00000444291 373 ntBASIC6.81□□□□□ -1.32
SCN4AP35499 LINC02083-201ENST00000462835 515 ntTSL 3 BASIC6.81□□□□□ -1.32
SCN4AP35499 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
SCN4AP35499 RN7SL447P-201ENST00000494711 245 ntBASIC6.81□□□□□ -1.32
SCN4AP35499 AC015864.1-201ENST00000496512 544 ntBASIC6.81□□□□□ -1.32
SCN4AP35499 AC013701.1-201ENST00000522657 465 ntBASIC6.81□□□□□ -1.32
SCN4AP35499 KLRD1-209ENST00000543420 802 ntTSL 5 BASIC6.81□□□□□ -1.32
SCN4AP35499 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC6.81□□□□□ -1.32
SCN4AP35499 AC016229.2-201ENST00000591331 417 ntTSL 2 BASIC6.81□□□□□ -1.32
SCN4AP35499 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC6.81□□□□□ -1.32
SCN4AP35499 TRPS1-203ENST00000395715 9990 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
SCN4AP35499 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
SCN4AP35499 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC6.81□□□□□ -1.32
SCN4AP35499 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
SCN4AP35499 GON4L-203ENST00000368331 7823 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
SCN4AP35499 GCNT1-202ENST00000442371 5972 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
SCN4AP35499 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
SCN4AP35499 ANKFY1-201ENST00000341657 7418 ntAPPRIS ALT1 TSL 5 BASIC6.81□□□□□ -1.32
SCN4AP35499 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
SCN4AP35499 IMMTP1-201ENST00000435590 2219 ntBASIC6.81□□□□□ -1.32
SCN4AP35499 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
SCN4AP35499 CD109-201ENST00000287097 9130 ntAPPRIS P3 TSL 1 (best) BASIC6.8□□□□□ -1.32
SCN4AP35499 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
SCN4AP35499 ARHGEF12-201ENST00000356641 6891 ntTSL 5 BASIC6.8□□□□□ -1.32
SCN4AP35499 GNAS-202ENST00000306090 477 ntTSL 5 BASIC6.8□□□□□ -1.32
SCN4AP35499 RNU4-4P-201ENST00000364588 130 ntBASIC6.8□□□□□ -1.32
SCN4AP35499 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
SCN4AP35499 NDUFAF4P3-201ENST00000456468 525 ntBASIC6.8□□□□□ -1.32
SCN4AP35499 AC092905.1-201ENST00000467527 949 ntBASIC6.8□□□□□ -1.32
SCN4AP35499 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC6.8□□□□□ -1.32
SCN4AP35499 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC6.8□□□□□ -1.32
SCN4AP35499 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC6.8□□□□□ -1.32
SCN4AP35499 AC069307.1-201ENST00000602820 447 ntBASIC6.8□□□□□ -1.32
SCN4AP35499 WBP1LP8-201ENST00000617401 327 ntBASIC6.8□□□□□ -1.32
SCN4AP35499 AC009234.1-201ENST00000634985 895 ntTSL 5 BASIC6.8□□□□□ -1.32
SCN4AP35499 SLFN13-204ENST00000526861 6004 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
SCN4AP35499 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
SCN4AP35499 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC6.8□□□□□ -1.32
SCN4AP35499 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
SCN4AP35499 LINC01268-201ENST00000434296 2755 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
SCN4AP35499 MYH15-201ENST00000273353 7074 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
SCN4AP35499 SSBP2-201ENST00000320672 8780 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
SCN4AP35499 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC6.8□□□□□ -1.32
SCN4AP35499 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC6.8□□□□□ -1.32
SCN4AP35499 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC6.8□□□□□ -1.32
SCN4AP35499 TOR1AIP2-203ENST00000482587 7067 ntTSL 2 BASIC6.8□□□□□ -1.32
SCN4AP35499 OR2J2-203ENST00000641417 2392 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
SCN4AP35499 GALK2-201ENST00000327171 5299 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
SCN4AP35499 AL360271.1-201ENST00000395679 510 ntBASIC6.8□□□□□ -1.32
SCN4AP35499 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC6.8□□□□□ -1.32
SCN4AP35499 TPT1P12-201ENST00000448968 492 ntBASIC6.8□□□□□ -1.32
SCN4AP35499 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC6.8□□□□□ -1.32
SCN4AP35499 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC6.8□□□□□ -1.32
SCN4AP35499 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC6.8□□□□□ -1.32
SCN4AP35499 RNU6ATAC24P-201ENST00000516811 135 ntBASIC6.8□□□□□ -1.32
SCN4AP35499 BRD9P1-201ENST00000529855 560 ntBASIC6.8□□□□□ -1.32
SCN4AP35499 AC126615.2-201ENST00000553003 515 ntBASIC6.8□□□□□ -1.32
SCN4AP35499 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC6.8□□□□□ -1.32
SCN4AP35499 NMNAT1P5-201ENST00000559657 841 ntBASIC6.8□□□□□ -1.32
SCN4AP35499 AC087283.1-201ENST00000604029 1074 ntBASIC6.8□□□□□ -1.32
SCN4AP35499 AC137695.1-201ENST00000604126 489 ntBASIC6.8□□□□□ -1.32
SCN4AP35499 SLC30A8-205ENST00000519688 5242 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
SCN4AP35499 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
SCN4AP35499 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
SCN4AP35499 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC6.8□□□□□ -1.32
SCN4AP35499 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
SCN4AP35499 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
SCN4AP35499 MGAM-209ENST00000620571 6483 ntTSL 5 BASIC6.8□□□□□ -1.32
SCN4AP35499 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC6.8□□□□□ -1.32
SCN4AP35499 AC004690.2-201ENST00000472838 1754 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
SCN4AP35499 FBXW7-203ENST00000296555 3572 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
SCN4AP35499 RBFOX2-205ENST00000405409 6932 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
SCN4AP35499 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
SCN4AP35499 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
SCN4AP35499 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC6.79□□□□□ -1.32
SCN4AP35499 AC001226.2-204ENST00000638101 2645 ntAPPRIS ALT2 TSL 5 BASIC6.79□□□□□ -1.32
SCN4AP35499 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
SCN4AP35499 CDK12-202ENST00000447079 8336 ntAPPRIS P3 TSL 1 (best) BASIC6.79□□□□□ -1.32
SCN4AP35499 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
SCN4AP35499 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
SCN4AP35499 AL451142.1-201ENST00000375867 775 ntBASIC6.79□□□□□ -1.32
SCN4AP35499 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
SCN4AP35499 MIR130A-201ENST00000385274 89 ntBASIC6.79□□□□□ -1.32
SCN4AP35499 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC6.79□□□□□ -1.32
SCN4AP35499 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC6.79□□□□□ -1.32
SCN4AP35499 AC009220.1-201ENST00000451614 275 ntBASIC6.79□□□□□ -1.32
SCN4AP35499 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC6.79□□□□□ -1.32
SCN4AP35499 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC6.79□□□□□ -1.32
SCN4AP35499 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC6.79□□□□□ -1.32
SCN4AP35499 PTER-205ENST00000535784 1203 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
SCN4AP35499 AC078878.1-201ENST00000539832 958 ntBASIC6.79□□□□□ -1.32
SCN4AP35499 AC114947.2-201ENST00000565748 2125 ntBASIC6.79□□□□□ -1.32
SCN4AP35499 AC067852.5-201ENST00000589299 310 ntBASIC6.79□□□□□ -1.32
SCN4AP35499 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC6.79□□□□□ -1.32
SCN4AP35499 AC025574.2-201ENST00000615621 514 ntBASIC6.79□□□□□ -1.32
SCN4AP35499 MAPK10-350ENST00000641777 965 ntBASIC6.79□□□□□ -1.32
SCN4AP35499 PARP4P1-201ENST00000435945 2337 ntBASIC6.79□□□□□ -1.32
SCN4AP35499 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC6.79□□□□□ -1.32
SCN4AP35499 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
SCN4AP35499 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC6.79□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms