Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
CSB-PGBD3P0DP91 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC8.93□□□□□ -0.98
CSB-PGBD3P0DP91 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC8.93□□□□□ -0.98
CSB-PGBD3P0DP91 AL603865.2-201ENST00000401679 213 ntBASIC8.93□□□□□ -0.98
CSB-PGBD3P0DP91 AL391422.1-201ENST00000402155 436 ntBASIC8.93□□□□□ -0.98
CSB-PGBD3P0DP91 RNA5SP198-201ENST00000410376 127 ntBASIC8.93□□□□□ -0.98
CSB-PGBD3P0DP91 AL449283.1-202ENST00000418249 604 ntBASIC8.93□□□□□ -0.98
CSB-PGBD3P0DP91 AC009500.1-201ENST00000420684 583 ntBASIC8.93□□□□□ -0.98
CSB-PGBD3P0DP91 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC8.93□□□□□ -0.98
CSB-PGBD3P0DP91 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC8.93□□□□□ -0.98
CSB-PGBD3P0DP91 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC8.93□□□□□ -0.98
CSB-PGBD3P0DP91 AMYP1-201ENST00000440059 1023 ntBASIC8.93□□□□□ -0.98
CSB-PGBD3P0DP91 AL035420.1-202ENST00000450129 357 ntTSL 3 BASIC8.93□□□□□ -0.98
CSB-PGBD3P0DP91 AL136981.1-203ENST00000451452 3844 ntBASIC8.93□□□□□ -0.98
CSB-PGBD3P0DP91 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC8.93□□□□□ -0.98
CSB-PGBD3P0DP91 NDUFA12P1-201ENST00000455914 406 ntBASIC8.93□□□□□ -0.98
CSB-PGBD3P0DP91 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC8.93□□□□□ -0.98
CSB-PGBD3P0DP91 AC092691.2-201ENST00000461787 803 ntBASIC8.93□□□□□ -0.98
CSB-PGBD3P0DP91 RPS7P7-201ENST00000463499 571 ntBASIC8.93□□□□□ -0.98
CSB-PGBD3P0DP91 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC8.93□□□□□ -0.98
CSB-PGBD3P0DP91 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC8.93□□□□□ -0.98
CSB-PGBD3P0DP91 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC8.93□□□□□ -0.98
CSB-PGBD3P0DP91 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
CSB-PGBD3P0DP91 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC8.93□□□□□ -0.98
CSB-PGBD3P0DP91 AC116353.3-201ENST00000511215 249 ntBASIC8.93□□□□□ -0.98
CSB-PGBD3P0DP91 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC8.93□□□□□ -0.98
CSB-PGBD3P0DP91 OR52H2P-201ENST00000514607 902 ntBASIC8.93□□□□□ -0.98
CSB-PGBD3P0DP91 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
CSB-PGBD3P0DP91 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC8.93□□□□□ -0.98
CSB-PGBD3P0DP91 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC8.93□□□□□ -0.98
CSB-PGBD3P0DP91 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC8.93□□□□□ -0.98
CSB-PGBD3P0DP91 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC8.93□□□□□ -0.98
CSB-PGBD3P0DP91 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC8.93□□□□□ -0.98
CSB-PGBD3P0DP91 AC016526.1-201ENST00000555465 520 ntTSL 3 BASIC8.93□□□□□ -0.98
CSB-PGBD3P0DP91 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC8.93□□□□□ -0.98
CSB-PGBD3P0DP91 NR2F2-AS1-209ENST00000560800 549 ntTSL 4 BASIC8.93□□□□□ -0.98
CSB-PGBD3P0DP91 PPP4R1-AS1-201ENST00000582435 379 ntTSL 2 BASIC8.93□□□□□ -0.98
CSB-PGBD3P0DP91 AL589863.1-201ENST00000595383 631 ntBASIC8.93□□□□□ -0.98
CSB-PGBD3P0DP91 OR2AS2P-201ENST00000606902 342 ntBASIC8.93□□□□□ -0.98
CSB-PGBD3P0DP91 AL136097.3-201ENST00000611097 505 ntBASIC8.93□□□□□ -0.98
CSB-PGBD3P0DP91 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
CSB-PGBD3P0DP91 AC121761.2-201ENST00000617300 689 ntBASIC8.93□□□□□ -0.98
CSB-PGBD3P0DP91 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC8.93□□□□□ -0.98
CSB-PGBD3P0DP91 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC8.93□□□□□ -0.98
CSB-PGBD3P0DP91 GLUD1P2-202ENST00000630097 606 ntTSL 3 BASIC8.93□□□□□ -0.98
CSB-PGBD3P0DP91 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
CSB-PGBD3P0DP91 SAMM50P1-201ENST00000455403 1399 ntBASIC8.93□□□□□ -0.98
CSB-PGBD3P0DP91 OR6J1-201ENST00000540461 4165 ntAPPRIS P1 BASIC8.93□□□□□ -0.98
CSB-PGBD3P0DP91 CYP4Z2P-202ENST00000505841 1436 ntTSL 2 BASIC8.93□□□□□ -0.98
CSB-PGBD3P0DP91 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
CSB-PGBD3P0DP91 LINC01697-202ENST00000426534 1764 ntTSL 2 BASIC8.93□□□□□ -0.98
CSB-PGBD3P0DP91 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC8.93□□□□□ -0.98
CSB-PGBD3P0DP91 LINC00649-203ENST00000427447 9124 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
CSB-PGBD3P0DP91 AC020978.6-201ENST00000571197 3177 ntBASIC8.93□□□□□ -0.98
CSB-PGBD3P0DP91 LARS-212ENST00000510191 3737 ntTSL 2 BASIC8.93□□□□□ -0.98
CSB-PGBD3P0DP91 ALG13-201ENST00000251943 3997 ntTSL 2 BASIC8.93□□□□□ -0.98
CSB-PGBD3P0DP91 TMEM170B-201ENST00000379426 8362 ntAPPRIS P1 TSL 4 BASIC8.93□□□□□ -0.98
CSB-PGBD3P0DP91 AL160408.3-201ENST00000442382 3564 ntTSL 2 BASIC8.92□□□□□ -0.98
CSB-PGBD3P0DP91 GOSR2-238ENST00000640495 3395 ntTSL 5 BASIC8.92□□□□□ -0.98
CSB-PGBD3P0DP91 OR4Q2-201ENST00000541415 2778 ntAPPRIS P5 BASIC8.92□□□□□ -0.98
CSB-PGBD3P0DP91 AC087501.5-201ENST00000607496 2374 ntBASIC8.92□□□□□ -0.98
CSB-PGBD3P0DP91 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
CSB-PGBD3P0DP91 C8orf34-208ENST00000523686 1948 ntAPPRIS ALT2 TSL 2 BASIC8.92□□□□□ -0.98
CSB-PGBD3P0DP91 MTND5P29-201ENST00000458676 1807 ntBASIC8.92□□□□□ -0.98
CSB-PGBD3P0DP91 GRIK2-205ENST00000369138 4921 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
CSB-PGBD3P0DP91 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
CSB-PGBD3P0DP91 ZNF148-201ENST00000360647 9651 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
CSB-PGBD3P0DP91 SPANXN5-201ENST00000375511 1316 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
CSB-PGBD3P0DP91 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC8.92□□□□□ -0.98
CSB-PGBD3P0DP91 TINAG-202ENST00000370864 692 ntTSL 2 BASIC8.92□□□□□ -0.98
CSB-PGBD3P0DP91 RNU6-1005P-201ENST00000384519 107 ntBASIC8.92□□□□□ -0.98
CSB-PGBD3P0DP91 RN7SKP62-201ENST00000384539 329 ntBASIC8.92□□□□□ -0.98
CSB-PGBD3P0DP91 AL355375.1-201ENST00000405686 392 ntBASIC8.92□□□□□ -0.98
CSB-PGBD3P0DP91 AL356131.1-201ENST00000405826 414 ntBASIC8.92□□□□□ -0.98
CSB-PGBD3P0DP91 RPA3-204ENST00000406109 434 ntTSL 3 BASIC8.92□□□□□ -0.98
CSB-PGBD3P0DP91 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC8.92□□□□□ -0.98
CSB-PGBD3P0DP91 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC8.92□□□□□ -0.98
CSB-PGBD3P0DP91 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC8.92□□□□□ -0.98
CSB-PGBD3P0DP91 AC009229.2-201ENST00000417213 351 ntTSL 3 BASIC8.92□□□□□ -0.98
CSB-PGBD3P0DP91 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC8.92□□□□□ -0.98
CSB-PGBD3P0DP91 GSTA6P-201ENST00000424144 582 ntBASIC8.92□□□□□ -0.98
CSB-PGBD3P0DP91 DNAJA1P5-201ENST00000440278 943 ntBASIC8.92□□□□□ -0.98
CSB-PGBD3P0DP91 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC8.92□□□□□ -0.98
CSB-PGBD3P0DP91 RPL7L1P11-201ENST00000446092 721 ntBASIC8.92□□□□□ -0.98
CSB-PGBD3P0DP91 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC8.92□□□□□ -0.98
CSB-PGBD3P0DP91 AL034399.1-201ENST00000451535 380 ntBASIC8.92□□□□□ -0.98
CSB-PGBD3P0DP91 AC008280.2-201ENST00000455473 307 ntBASIC8.92□□□□□ -0.98
CSB-PGBD3P0DP91 F11-205ENST00000492972 1204 ntTSL 2 BASIC8.92□□□□□ -0.98
CSB-PGBD3P0DP91 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC8.92□□□□□ -0.98
CSB-PGBD3P0DP91 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC8.92□□□□□ -0.98
CSB-PGBD3P0DP91 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC8.92□□□□□ -0.98
CSB-PGBD3P0DP91 RPL3P13-201ENST00000550415 216 ntBASIC8.92□□□□□ -0.98
CSB-PGBD3P0DP91 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC8.92□□□□□ -0.98
CSB-PGBD3P0DP91 AL138895.2-201ENST00000603019 178 ntBASIC8.92□□□□□ -0.98
CSB-PGBD3P0DP91 AC124916.2-201ENST00000604416 224 ntBASIC8.92□□□□□ -0.98
CSB-PGBD3P0DP91 AC103591.3-201ENST00000608684 209 ntBASIC8.92□□□□□ -0.98
CSB-PGBD3P0DP91 AC068944.2-201ENST00000610373 403 ntBASIC8.92□□□□□ -0.98
CSB-PGBD3P0DP91 AL133243.1-201ENST00000614487 366 ntBASIC8.92□□□□□ -0.98
CSB-PGBD3P0DP91 RMST_10.1-201ENST00000616309 154 ntBASIC8.92□□□□□ -0.98
CSB-PGBD3P0DP91 AC015804.1-201ENST00000622935 435 ntBASIC8.92□□□□□ -0.98
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms