Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 AC004690.2-201ENST00000472838 1754 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
VTNP04004 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
VTNP04004 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC6.33□□□□□ -1.4
VTNP04004 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
VTNP04004 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
VTNP04004 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
VTNP04004 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC6.33□□□□□ -1.4
VTNP04004 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
VTNP04004 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC6.33□□□□□ -1.4
VTNP04004 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
VTNP04004 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
VTNP04004 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
VTNP04004 RN7SKP124-201ENST00000364730 341 ntBASIC6.33□□□□□ -1.4
VTNP04004 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
VTNP04004 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC6.33□□□□□ -1.4
VTNP04004 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
VTNP04004 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC6.33□□□□□ -1.4
VTNP04004 AL390119.1-201ENST00000440329 312 ntBASIC6.33□□□□□ -1.4
VTNP04004 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC6.33□□□□□ -1.4
VTNP04004 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC6.33□□□□□ -1.4
VTNP04004 RN7SL629P-201ENST00000489622 285 ntBASIC6.33□□□□□ -1.4
VTNP04004 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC6.33□□□□□ -1.4
VTNP04004 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC6.33□□□□□ -1.4
VTNP04004 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC6.33□□□□□ -1.4
VTNP04004 IGKV2-19-201ENST00000518132 283 ntBASIC6.33□□□□□ -1.4
VTNP04004 AC008429.4-201ENST00000521201 182 ntBASIC6.33□□□□□ -1.4
VTNP04004 AC090424.1-201ENST00000535243 736 ntBASIC6.33□□□□□ -1.4
VTNP04004 AC027667.1-201ENST00000545814 304 ntBASIC6.33□□□□□ -1.4
VTNP04004 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC6.33□□□□□ -1.4
VTNP04004 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC6.33□□□□□ -1.4
VTNP04004 AL049779.3-201ENST00000557141 606 ntBASIC6.33□□□□□ -1.4
VTNP04004 AC007346.2-201ENST00000564816 892 ntBASIC6.33□□□□□ -1.4
VTNP04004 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC6.33□□□□□ -1.4
VTNP04004 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC6.33□□□□□ -1.4
VTNP04004 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC6.33□□□□□ -1.4
VTNP04004 GMFG-212ENST00000602185 423 ntTSL 3 BASIC6.33□□□□□ -1.4
VTNP04004 AC079395.2-201ENST00000610982 737 ntBASIC6.33□□□□□ -1.4
VTNP04004 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
VTNP04004 AL161756.3-201ENST00000641216 2071 ntBASIC6.33□□□□□ -1.4
VTNP04004 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
VTNP04004 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
VTNP04004 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
VTNP04004 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC6.33□□□□□ -1.4
VTNP04004 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
VTNP04004 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
VTNP04004 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC6.33□□□□□ -1.4
VTNP04004 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC6.33□□□□□ -1.4
VTNP04004 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
VTNP04004 NEK11-201ENST00000356918 1874 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
VTNP04004 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
VTNP04004 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
VTNP04004 CPS1-IT1-201ENST00000628368 2306 ntBASIC6.32□□□□□ -1.4
VTNP04004 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
VTNP04004 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC6.32□□□□□ -1.4
VTNP04004 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC6.32□□□□□ -1.4
VTNP04004 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
VTNP04004 NIFKP3-201ENST00000417799 865 ntBASIC6.32□□□□□ -1.4
VTNP04004 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC6.32□□□□□ -1.4
VTNP04004 AC113412.1-201ENST00000425840 504 ntBASIC6.32□□□□□ -1.4
VTNP04004 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC6.32□□□□□ -1.4
VTNP04004 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
VTNP04004 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC6.32□□□□□ -1.4
VTNP04004 AL355032.1-201ENST00000472981 438 ntBASIC6.32□□□□□ -1.4
VTNP04004 AC087672.1-201ENST00000479876 766 ntBASIC6.32□□□□□ -1.4
VTNP04004 AC006539.1-201ENST00000481419 501 ntBASIC6.32□□□□□ -1.4
VTNP04004 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC6.32□□□□□ -1.4
VTNP04004 IGKV2-18-201ENST00000522607 343 ntBASIC6.32□□□□□ -1.4
VTNP04004 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC6.32□□□□□ -1.4
VTNP04004 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC6.32□□□□□ -1.4
VTNP04004 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC6.32□□□□□ -1.4
VTNP04004 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC6.32□□□□□ -1.4
VTNP04004 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC6.32□□□□□ -1.4
VTNP04004 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC6.32□□□□□ -1.4
VTNP04004 AC016229.2-201ENST00000591331 417 ntTSL 2 BASIC6.32□□□□□ -1.4
VTNP04004 AC016252.1-201ENST00000609721 474 ntBASIC6.32□□□□□ -1.4
VTNP04004 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC6.32□□□□□ -1.4
VTNP04004 CDON-202ENST00000392693 9138 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
VTNP04004 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
VTNP04004 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
VTNP04004 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC6.32□□□□□ -1.4
VTNP04004 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
VTNP04004 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC6.32□□□□□ -1.4
VTNP04004 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
VTNP04004 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC6.32□□□□□ -1.4
VTNP04004 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
VTNP04004 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
VTNP04004 AC093829.1-201ENST00000506662 1618 ntBASIC6.32□□□□□ -1.4
VTNP04004 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
VTNP04004 AC114876.1-201ENST00000490962 1366 ntBASIC6.31□□□□□ -1.4
VTNP04004 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC6.31□□□□□ -1.4
VTNP04004 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
VTNP04004 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
VTNP04004 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC6.31□□□□□ -1.4
VTNP04004 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC6.31□□□□□ -1.4
VTNP04004 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
VTNP04004 RNA5SP131-201ENST00000365452 119 ntBASIC6.31□□□□□ -1.4
VTNP04004 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
VTNP04004 AL391422.1-201ENST00000402155 436 ntBASIC6.31□□□□□ -1.4
VTNP04004 AL691447.1-201ENST00000419456 387 ntBASIC6.31□□□□□ -1.4
VTNP04004 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC6.31□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 92.9 ms