Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC6.03□□□□□ -1.44
PDGFBP01127 PACRG-210ENST00000611387 279 ntTSL 5 BASIC6.03□□□□□ -1.44
PDGFBP01127 AL121612.2-201ENST00000612261 482 ntBASIC6.03□□□□□ -1.44
PDGFBP01127 AL139407.1-201ENST00000613826 1175 ntBASIC6.03□□□□□ -1.44
PDGFBP01127 FGA-201ENST00000302053 3678 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
PDGFBP01127 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC6.03□□□□□ -1.44
PDGFBP01127 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
PDGFBP01127 NCOA4P2-201ENST00000340589 1813 ntBASIC6.03□□□□□ -1.44
PDGFBP01127 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC6.03□□□□□ -1.44
PDGFBP01127 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC6.03□□□□□ -1.44
PDGFBP01127 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC6.03□□□□□ -1.44
PDGFBP01127 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
PDGFBP01127 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC6.03□□□□□ -1.44
PDGFBP01127 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC6.03□□□□□ -1.44
PDGFBP01127 ZNF699-201ENST00000308650 2094 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
PDGFBP01127 INTS12-202ENST00000394735 1927 ntTSL 5 BASIC6.03□□□□□ -1.44
PDGFBP01127 MAPK10-287ENST00000641217 3037 ntBASIC6.03□□□□□ -1.44
PDGFBP01127 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
PDGFBP01127 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC6.03□□□□□ -1.44
PDGFBP01127 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
PDGFBP01127 TCL6-203ENST00000459662 3307 ntTSL 2 BASIC6.02□□□□□ -1.45
PDGFBP01127 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
PDGFBP01127 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
PDGFBP01127 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC6.02□□□□□ -1.45
PDGFBP01127 HTR1D-201ENST00000374619 2835 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
PDGFBP01127 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
PDGFBP01127 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
PDGFBP01127 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC6.02□□□□□ -1.45
PDGFBP01127 NME1P1-201ENST00000420914 382 ntBASIC6.02□□□□□ -1.45
PDGFBP01127 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC6.02□□□□□ -1.45
PDGFBP01127 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC6.02□□□□□ -1.45
PDGFBP01127 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC6.02□□□□□ -1.45
PDGFBP01127 AL672167.3-201ENST00000465951 960 ntBASIC6.02□□□□□ -1.45
PDGFBP01127 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
PDGFBP01127 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC6.02□□□□□ -1.45
PDGFBP01127 C5orf64-204ENST00000507461 535 ntTSL 4 BASIC6.02□□□□□ -1.45
PDGFBP01127 PGAM1P13-201ENST00000507497 754 ntBASIC6.02□□□□□ -1.45
PDGFBP01127 SUMO2P7-201ENST00000511179 285 ntBASIC6.02□□□□□ -1.45
PDGFBP01127 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC6.02□□□□□ -1.45
PDGFBP01127 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC6.02□□□□□ -1.45
PDGFBP01127 OR5D15P-201ENST00000531671 942 ntBASIC6.02□□□□□ -1.45
PDGFBP01127 CR383656.6-201ENST00000550518 394 ntBASIC6.02□□□□□ -1.45
PDGFBP01127 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC6.02□□□□□ -1.45
PDGFBP01127 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC6.02□□□□□ -1.45
PDGFBP01127 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC6.02□□□□□ -1.45
PDGFBP01127 AL359704.2-201ENST00000604335 521 ntBASIC6.02□□□□□ -1.45
PDGFBP01127 AC010245.2-201ENST00000606908 1167 ntBASIC6.02□□□□□ -1.45
PDGFBP01127 ZNF658B-201ENST00000602828 3408 ntBASIC6.02□□□□□ -1.45
PDGFBP01127 AC021078.1-201ENST00000499521 8636 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
PDGFBP01127 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC6.02□□□□□ -1.45
PDGFBP01127 BCL2L14-201ENST00000266434 2039 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
PDGFBP01127 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
PDGFBP01127 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
PDGFBP01127 AC007114.2-201ENST00000576014 4281 ntBASIC6.02□□□□□ -1.45
PDGFBP01127 AC093829.1-201ENST00000506662 1618 ntBASIC6.02□□□□□ -1.45
PDGFBP01127 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
PDGFBP01127 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
PDGFBP01127 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC6.02□□□□□ -1.45
PDGFBP01127 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC6.02□□□□□ -1.45
PDGFBP01127 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC6.02□□□□□ -1.45
PDGFBP01127 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
PDGFBP01127 CTNNA1P1-201ENST00000515849 2728 ntBASIC6.02□□□□□ -1.45
PDGFBP01127 MIPEPP2-201ENST00000422560 1819 ntBASIC6.02□□□□□ -1.45
PDGFBP01127 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
PDGFBP01127 MFSD4BP1-201ENST00000513330 1552 ntBASIC6.01□□□□□ -1.45
PDGFBP01127 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC6.01□□□□□ -1.45
PDGFBP01127 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC6.01□□□□□ -1.45
PDGFBP01127 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC6.01□□□□□ -1.45
PDGFBP01127 FTO-215ENST00000636491 1676 ntTSL 5 BASIC6.01□□□□□ -1.45
PDGFBP01127 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
PDGFBP01127 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
PDGFBP01127 AC009120.2-204ENST00000621548 2032 ntBASIC6.01□□□□□ -1.45
PDGFBP01127 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
PDGFBP01127 BRD7P6-201ENST00000431406 1860 ntBASIC6.01□□□□□ -1.45
PDGFBP01127 AC005332.9-201ENST00000620266 2921 ntBASIC6.01□□□□□ -1.45
PDGFBP01127 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
PDGFBP01127 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC6.01□□□□□ -1.45
PDGFBP01127 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
PDGFBP01127 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC6.01□□□□□ -1.45
PDGFBP01127 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
PDGFBP01127 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC6.01□□□□□ -1.45
PDGFBP01127 RPL23P2-201ENST00000320371 421 ntBASIC6.01□□□□□ -1.45
PDGFBP01127 RNA5SP478-201ENST00000364657 115 ntBASIC6.01□□□□□ -1.45
PDGFBP01127 MIR141-201ENST00000384975 95 ntBASIC6.01□□□□□ -1.45
PDGFBP01127 MIR765-201ENST00000390226 114 ntBASIC6.01□□□□□ -1.45
PDGFBP01127 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC6.01□□□□□ -1.45
PDGFBP01127 EIF2S2P3-201ENST00000428356 999 ntBASIC6.01□□□□□ -1.45
PDGFBP01127 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
PDGFBP01127 AZGP1P2-201ENST00000454506 345 ntBASIC6.01□□□□□ -1.45
PDGFBP01127 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC6.01□□□□□ -1.45
PDGFBP01127 GYG1P1-201ENST00000460864 698 ntBASIC6.01□□□□□ -1.45
PDGFBP01127 AC073594.1-201ENST00000462065 364 ntBASIC6.01□□□□□ -1.45
PDGFBP01127 AP002371.1-201ENST00000463604 433 ntBASIC6.01□□□□□ -1.45
PDGFBP01127 AC021074.2-201ENST00000468434 172 ntBASIC6.01□□□□□ -1.45
PDGFBP01127 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC6.01□□□□□ -1.45
PDGFBP01127 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC6.01□□□□□ -1.45
PDGFBP01127 RN7SKP98-201ENST00000517070 156 ntBASIC6.01□□□□□ -1.45
PDGFBP01127 MRPS16P1-201ENST00000523462 412 ntBASIC6.01□□□□□ -1.45
PDGFBP01127 DCN-209ENST00000546745 1026 ntTSL 3 BASIC6.01□□□□□ -1.45
PDGFBP01127 HMGN2P47-201ENST00000559378 272 ntBASIC6.01□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 69.5 ms