Protein–RNA interactions for Protein: O95484

CLDN9, Claudin-9, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9O95484 PPIAP27-201ENST00000453800 265 ntBASIC5.61□□□□□ -1.51
CLDN9O95484 RBBP4P1-201ENST00000502424 1276 ntBASIC5.61□□□□□ -1.51
CLDN9O95484 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC5.61□□□□□ -1.51
CLDN9O95484 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CLDN9O95484 SCARNA18.1-201ENST00000516330 83 ntBASIC5.61□□□□□ -1.51
CLDN9O95484 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC5.61□□□□□ -1.51
CLDN9O95484 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC5.61□□□□□ -1.51
CLDN9O95484 AC084121.1-201ENST00000533882 835 ntBASIC5.61□□□□□ -1.51
CLDN9O95484 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC5.61□□□□□ -1.51
CLDN9O95484 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
CLDN9O95484 AC125612.1-201ENST00000547580 377 ntBASIC5.61□□□□□ -1.51
CLDN9O95484 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.61□□□□□ -1.51
CLDN9O95484 AC007956.1-201ENST00000555623 542 ntBASIC5.61□□□□□ -1.51
CLDN9O95484 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC5.61□□□□□ -1.51
CLDN9O95484 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC5.61□□□□□ -1.51
CLDN9O95484 AC008507.3-201ENST00000585753 472 ntBASIC5.61□□□□□ -1.51
CLDN9O95484 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC5.61□□□□□ -1.51
CLDN9O95484 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.61□□□□□ -1.51
CLDN9O95484 AL132656.3-201ENST00000606384 1595 ntBASIC5.61□□□□□ -1.51
CLDN9O95484 AC108673.3-201ENST00000609183 335 ntBASIC5.61□□□□□ -1.51
CLDN9O95484 AC027088.4-201ENST00000611559 1947 ntBASIC5.61□□□□□ -1.51
CLDN9O95484 MIR6793-201ENST00000612376 63 ntBASIC5.61□□□□□ -1.51
CLDN9O95484 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC5.61□□□□□ -1.51
CLDN9O95484 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.61□□□□□ -1.51
CLDN9O95484 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC5.61□□□□□ -1.51
CLDN9O95484 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC5.61□□□□□ -1.51
CLDN9O95484 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC5.61□□□□□ -1.51
CLDN9O95484 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC5.61□□□□□ -1.51
CLDN9O95484 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
CLDN9O95484 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CLDN9O95484 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
CLDN9O95484 AC011933.2-201ENST00000578539 2790 ntBASIC5.61□□□□□ -1.51
CLDN9O95484 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.61□□□□□ -1.51
CLDN9O95484 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CLDN9O95484 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
CLDN9O95484 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
CLDN9O95484 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC5.6□□□□□ -1.51
CLDN9O95484 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CLDN9O95484 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CLDN9O95484 AF287957.1-201ENST00000607368 1595 ntBASIC5.6□□□□□ -1.51
CLDN9O95484 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.6□□□□□ -1.51
CLDN9O95484 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC5.6□□□□□ -1.51
CLDN9O95484 AC232271.1-201ENST00000602455 2715 ntBASIC5.6□□□□□ -1.51
CLDN9O95484 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CLDN9O95484 COX6B1P3-201ENST00000312310 260 ntBASIC5.6□□□□□ -1.51
CLDN9O95484 RNU1-65P-201ENST00000363919 148 ntBASIC5.6□□□□□ -1.51
CLDN9O95484 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC5.6□□□□□ -1.51
CLDN9O95484 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC5.6□□□□□ -1.51
CLDN9O95484 PLA2G12AP2-201ENST00000424744 264 ntBASIC5.6□□□□□ -1.51
CLDN9O95484 AC002069.1-201ENST00000429649 1159 ntBASIC5.6□□□□□ -1.51
CLDN9O95484 AC242426.1-201ENST00000435270 960 ntBASIC5.6□□□□□ -1.51
CLDN9O95484 AC073072.2-201ENST00000447425 348 ntBASIC5.6□□□□□ -1.51
CLDN9O95484 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC5.6□□□□□ -1.51
CLDN9O95484 AC068228.1-201ENST00000461723 211 ntBASIC5.6□□□□□ -1.51
CLDN9O95484 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC5.6□□□□□ -1.51
CLDN9O95484 RN7SL57P-201ENST00000493687 290 ntBASIC5.6□□□□□ -1.51
CLDN9O95484 LDHAP1-201ENST00000509421 992 ntBASIC5.6□□□□□ -1.51
CLDN9O95484 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.6□□□□□ -1.51
CLDN9O95484 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.6□□□□□ -1.51
CLDN9O95484 AC084824.2-201ENST00000548906 345 ntBASIC5.6□□□□□ -1.51
CLDN9O95484 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CLDN9O95484 AC002310.3-201ENST00000569728 723 ntBASIC5.6□□□□□ -1.51
CLDN9O95484 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC5.6□□□□□ -1.51
CLDN9O95484 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.6□□□□□ -1.51
CLDN9O95484 AL359091.2-201ENST00000609303 556 ntBASIC5.6□□□□□ -1.51
CLDN9O95484 MIR6806-201ENST00000622141 64 ntBASIC5.6□□□□□ -1.51
CLDN9O95484 AC022400.9-201ENST00000623633 273 ntBASIC5.6□□□□□ -1.51
CLDN9O95484 AC079776.5-201ENST00000641920 211 ntBASIC5.6□□□□□ -1.51
CLDN9O95484 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CLDN9O95484 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
CLDN9O95484 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC5.6□□□□□ -1.51
CLDN9O95484 AC015799.1-201ENST00000622996 3122 ntBASIC5.6□□□□□ -1.51
CLDN9O95484 AC025470.1-201ENST00000510053 2032 ntBASIC5.6□□□□□ -1.51
CLDN9O95484 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CLDN9O95484 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CLDN9O95484 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.6□□□□□ -1.51
CLDN9O95484 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CLDN9O95484 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CLDN9O95484 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
CLDN9O95484 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.59□□□□□ -1.51
CLDN9O95484 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CLDN9O95484 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC5.59□□□□□ -1.51
CLDN9O95484 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CLDN9O95484 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CLDN9O95484 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
CLDN9O95484 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CLDN9O95484 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
CLDN9O95484 AC087752.1-201ENST00000391360 558 ntBASIC5.59□□□□□ -1.51
CLDN9O95484 CXADRP1-201ENST00000398098 1095 ntBASIC5.59□□□□□ -1.51
CLDN9O95484 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
CLDN9O95484 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC5.59□□□□□ -1.51
CLDN9O95484 RANP7-201ENST00000418085 644 ntBASIC5.59□□□□□ -1.51
CLDN9O95484 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC5.59□□□□□ -1.51
CLDN9O95484 LINC01363-202ENST00000428030 930 ntTSL 3 BASIC5.59□□□□□ -1.51
CLDN9O95484 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC5.59□□□□□ -1.51
CLDN9O95484 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC5.59□□□□□ -1.51
CLDN9O95484 VN1R110P-201ENST00000438988 971 ntBASIC5.59□□□□□ -1.51
CLDN9O95484 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.59□□□□□ -1.51
CLDN9O95484 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
CLDN9O95484 OR7E116P-201ENST00000448529 957 ntBASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 145.8 ms