Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC8.71□□□□□ -1.02
RAPGEF3O95398 NAP1L4P3-201ENST00000432820 1147 ntBASIC8.71□□□□□ -1.02
RAPGEF3O95398 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC8.71□□□□□ -1.02
RAPGEF3O95398 AC023141.8-201ENST00000442554 208 ntBASIC8.71□□□□□ -1.02
RAPGEF3O95398 VDAC2P4-201ENST00000452925 711 ntBASIC8.71□□□□□ -1.02
RAPGEF3O95398 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC8.71□□□□□ -1.02
RAPGEF3O95398 AK5-208ENST00000478255 556 ntTSL 2 BASIC8.71□□□□□ -1.02
RAPGEF3O95398 AGGF1P3-201ENST00000493675 1213 ntBASIC8.71□□□□□ -1.02
RAPGEF3O95398 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC8.71□□□□□ -1.02
RAPGEF3O95398 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC8.71□□□□□ -1.02
RAPGEF3O95398 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
RAPGEF3O95398 RPL21P136-201ENST00000605378 396 ntBASIC8.71□□□□□ -1.02
RAPGEF3O95398 AC144521.1-201ENST00000607148 956 ntBASIC8.71□□□□□ -1.02
RAPGEF3O95398 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC8.71□□□□□ -1.02
RAPGEF3O95398 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC8.71□□□□□ -1.02
RAPGEF3O95398 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC8.71□□□□□ -1.02
RAPGEF3O95398 AL391597.1-201ENST00000618707 694 ntBASIC8.71□□□□□ -1.02
RAPGEF3O95398 AC012254.5-201ENST00000623573 478 ntBASIC8.71□□□□□ -1.02
RAPGEF3O95398 LINC01739-205ENST00000641890 573 ntBASIC8.71□□□□□ -1.02
RAPGEF3O95398 TLN2-209ENST00000561311 11880 ntAPPRIS P1 TSL 5 BASIC8.71□□□□□ -1.02
RAPGEF3O95398 ZHX3-211ENST00000544979 3933 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
RAPGEF3O95398 TTC39B-208ENST00000512701 10483 ntAPPRIS P3 TSL 2 BASIC8.71□□□□□ -1.02
RAPGEF3O95398 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC8.71□□□□□ -1.02
RAPGEF3O95398 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC8.71□□□□□ -1.02
RAPGEF3O95398 EOGT-201ENST00000295571 4138 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
RAPGEF3O95398 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
RAPGEF3O95398 OR5T2-202ENST00000641661 2062 ntAPPRIS ALT2 BASIC8.71□□□□□ -1.02
RAPGEF3O95398 FAM160A1-203ENST00000505231 4156 ntAPPRIS P1 TSL 5 BASIC8.71□□□□□ -1.02
RAPGEF3O95398 NAV2-203ENST00000396085 11000 ntAPPRIS P4 TSL 5 BASIC8.7□□□□□ -1.02
RAPGEF3O95398 NBPF11-202ENST00000614015 4630 ntAPPRIS P2 TSL 2 BASIC8.7□□□□□ -1.02
RAPGEF3O95398 LIPG-201ENST00000261292 10441 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
RAPGEF3O95398 NRCAM-203ENST00000379024 5782 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
RAPGEF3O95398 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC8.7□□□□□ -1.02
RAPGEF3O95398 DCX-208ENST00000636035 9269 ntAPPRIS ALT1 TSL 2 BASIC8.7□□□□□ -1.02
RAPGEF3O95398 RNA5SP335-201ENST00000363817 110 ntBASIC8.7□□□□□ -1.02
RAPGEF3O95398 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC8.7□□□□□ -1.02
RAPGEF3O95398 NENFP1-201ENST00000419476 466 ntBASIC8.7□□□□□ -1.02
RAPGEF3O95398 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC8.7□□□□□ -1.02
RAPGEF3O95398 AL162427.1-201ENST00000450399 439 ntTSL 5 BASIC8.7□□□□□ -1.02
RAPGEF3O95398 AC073610.1-201ENST00000489971 396 ntBASIC8.7□□□□□ -1.02
RAPGEF3O95398 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC8.7□□□□□ -1.02
RAPGEF3O95398 RNU4-18P-201ENST00000516751 149 ntBASIC8.7□□□□□ -1.02
RAPGEF3O95398 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC8.7□□□□□ -1.02
RAPGEF3O95398 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC8.7□□□□□ -1.02
RAPGEF3O95398 AL391001.1-201ENST00000602747 715 ntBASIC8.7□□□□□ -1.02
RAPGEF3O95398 TAS2R6P-201ENST00000605022 826 ntBASIC8.7□□□□□ -1.02
RAPGEF3O95398 AC005972.3-201ENST00000606304 481 ntBASIC8.7□□□□□ -1.02
RAPGEF3O95398 AC092574.1-201ENST00000609771 420 ntBASIC8.7□□□□□ -1.02
RAPGEF3O95398 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC8.7□□□□□ -1.02
RAPGEF3O95398 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC8.7□□□□□ -1.02
RAPGEF3O95398 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC8.7□□□□□ -1.02
RAPGEF3O95398 RACGAP1-221ENST00000551016 2193 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
RAPGEF3O95398 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
RAPGEF3O95398 SETDB1-201ENST00000271640 4437 ntAPPRIS ALT1 TSL 1 (best) BASIC8.7□□□□□ -1.02
RAPGEF3O95398 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC8.7□□□□□ -1.02
RAPGEF3O95398 LINC00598-211ENST00000636621 3241 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
RAPGEF3O95398 DSCAM-203ENST00000617870 6176 ntTSL 5 BASIC8.7□□□□□ -1.02
RAPGEF3O95398 OR2J2-203ENST00000641417 2392 ntAPPRIS P1 BASIC8.7□□□□□ -1.02
RAPGEF3O95398 AC021078.1-201ENST00000499521 8636 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
RAPGEF3O95398 FZD3-204ENST00000537916 13740 ntAPPRIS P1 TSL 2 BASIC8.7□□□□□ -1.02
RAPGEF3O95398 ST6GAL1-211ENST00000448044 4302 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
RAPGEF3O95398 IMMTP1-201ENST00000435590 2219 ntBASIC8.69□□□□□ -1.02
RAPGEF3O95398 IGF1R-206ENST00000558762 11726 ntAPPRIS ALT1 TSL 1 (best) BASIC8.69□□□□□ -1.02
RAPGEF3O95398 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
RAPGEF3O95398 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC8.69□□□□□ -1.02
RAPGEF3O95398 TMEM192-201ENST00000306480 10012 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
RAPGEF3O95398 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
RAPGEF3O95398 AL133325.1-201ENST00000421090 382 ntBASIC8.69□□□□□ -1.02
RAPGEF3O95398 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC8.69□□□□□ -1.02
RAPGEF3O95398 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC8.69□□□□□ -1.02
RAPGEF3O95398 MTND3P4-201ENST00000453537 303 ntBASIC8.69□□□□□ -1.02
RAPGEF3O95398 NDUFAF4P3-201ENST00000456468 525 ntBASIC8.69□□□□□ -1.02
RAPGEF3O95398 COL6A4P2-205ENST00000509855 506 ntBASIC8.69□□□□□ -1.02
RAPGEF3O95398 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC8.69□□□□□ -1.02
RAPGEF3O95398 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC8.69□□□□□ -1.02
RAPGEF3O95398 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC8.69□□□□□ -1.02
RAPGEF3O95398 BX322635.1-201ENST00000605804 496 ntBASIC8.69□□□□□ -1.02
RAPGEF3O95398 AC026790.2-201ENST00000606282 430 ntBASIC8.69□□□□□ -1.02
RAPGEF3O95398 WWOX-217ENST00000620008 450 ntTSL 2 BASIC8.69□□□□□ -1.02
RAPGEF3O95398 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
RAPGEF3O95398 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC8.69□□□□□ -1.02
RAPGEF3O95398 ETV1-210ENST00000430479 6740 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
RAPGEF3O95398 OR56B1-201ENST00000317121 2075 ntAPPRIS P1 BASIC8.69□□□□□ -1.02
RAPGEF3O95398 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC8.69□□□□□ -1.02
RAPGEF3O95398 CTAGE11P-201ENST00000451540 2353 ntBASIC8.69□□□□□ -1.02
RAPGEF3O95398 PGAP1-201ENST00000354764 11114 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
RAPGEF3O95398 MTIF2-201ENST00000263629 2528 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
RAPGEF3O95398 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC8.69□□□□□ -1.02
RAPGEF3O95398 HMGCR-209ENST00000511206 3395 ntAPPRIS P1 TSL 2 BASIC8.69□□□□□ -1.02
RAPGEF3O95398 HMBOX1-211ENST00000524238 1731 ntTSL 2 BASIC8.68□□□□□ -1.02
RAPGEF3O95398 API5-210ENST00000534600 1760 ntTSL 5 BASIC8.68□□□□□ -1.02
RAPGEF3O95398 HSPA8P18-201ENST00000439846 1928 ntBASIC8.68□□□□□ -1.02
RAPGEF3O95398 FANCD2-201ENST00000287647 5219 ntAPPRIS P3 TSL 1 (best) BASIC8.68□□□□□ -1.02
RAPGEF3O95398 ARHGAP32-203ENST00000524655 8194 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
RAPGEF3O95398 AC110373.1-201ENST00000505994 3505 ntBASIC8.68□□□□□ -1.02
RAPGEF3O95398 SLC16A4-210ENST00000541986 2496 ntTSL 2 BASIC8.68□□□□□ -1.02
RAPGEF3O95398 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
RAPGEF3O95398 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC8.68□□□□□ -1.02
RAPGEF3O95398 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC8.68□□□□□ -1.02
RAPGEF3O95398 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC8.68□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms