Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC4.88□□□□□ -1.63
SDCBPO00560 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
SDCBPO00560 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC4.87□□□□□ -1.63
SDCBPO00560 AC093671.1-201ENST00000624981 2929 ntBASIC4.87□□□□□ -1.63
SDCBPO00560 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SDCBPO00560 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SDCBPO00560 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SDCBPO00560 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
SDCBPO00560 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
SDCBPO00560 SNORA70.6-201ENST00000383934 134 ntBASIC4.87□□□□□ -1.63
SDCBPO00560 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC4.87□□□□□ -1.63
SDCBPO00560 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC4.87□□□□□ -1.63
SDCBPO00560 AL049712.1-201ENST00000418739 872 ntTSL 3 BASIC4.87□□□□□ -1.63
SDCBPO00560 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC4.87□□□□□ -1.63
SDCBPO00560 RPS4XP5-201ENST00000419038 768 ntBASIC4.87□□□□□ -1.63
SDCBPO00560 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC4.87□□□□□ -1.63
SDCBPO00560 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC4.87□□□□□ -1.63
SDCBPO00560 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC4.87□□□□□ -1.63
SDCBPO00560 AC023141.8-201ENST00000442554 208 ntBASIC4.87□□□□□ -1.63
SDCBPO00560 RBMY2AP-201ENST00000445405 1157 ntBASIC4.87□□□□□ -1.63
SDCBPO00560 AC097463.1-201ENST00000447288 481 ntBASIC4.87□□□□□ -1.63
SDCBPO00560 EEF1B2P3-201ENST00000447718 678 ntBASIC4.87□□□□□ -1.63
SDCBPO00560 RBMY2CP-201ENST00000448575 1157 ntBASIC4.87□□□□□ -1.63
SDCBPO00560 RBMY2DP-202ENST00000448881 1157 ntBASIC4.87□□□□□ -1.63
SDCBPO00560 RBMY2BP-202ENST00000451071 1156 ntBASIC4.87□□□□□ -1.63
SDCBPO00560 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC4.87□□□□□ -1.63
SDCBPO00560 AC021006.1-201ENST00000489849 553 ntBASIC4.87□□□□□ -1.63
SDCBPO00560 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC4.87□□□□□ -1.63
SDCBPO00560 AL158068.1-201ENST00000506116 616 ntBASIC4.87□□□□□ -1.63
SDCBPO00560 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC4.87□□□□□ -1.63
SDCBPO00560 AC009879.1-201ENST00000520029 839 ntBASIC4.87□□□□□ -1.63
SDCBPO00560 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
SDCBPO00560 ASB8-202ENST00000535055 657 ntTSL 2 BASIC4.87□□□□□ -1.63
SDCBPO00560 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC4.87□□□□□ -1.63
SDCBPO00560 DPPA3P2-202ENST00000557188 1219 ntBASIC4.87□□□□□ -1.63
SDCBPO00560 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC4.87□□□□□ -1.63
SDCBPO00560 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SDCBPO00560 AC068768.2-201ENST00000602352 343 ntBASIC4.87□□□□□ -1.63
SDCBPO00560 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC4.87□□□□□ -1.63
SDCBPO00560 AC007786.3-201ENST00000615154 596 ntBASIC4.87□□□□□ -1.63
SDCBPO00560 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SDCBPO00560 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC4.87□□□□□ -1.63
SDCBPO00560 AP001052.1-201ENST00000626421 99 ntBASIC4.87□□□□□ -1.63
SDCBPO00560 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC4.87□□□□□ -1.63
SDCBPO00560 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC4.87□□□□□ -1.63
SDCBPO00560 AC111152.1-202ENST00000635848 339 ntBASIC4.87□□□□□ -1.63
SDCBPO00560 EEF1A1P30-201ENST00000429708 1315 ntBASIC4.87□□□□□ -1.63
SDCBPO00560 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC4.87□□□□□ -1.63
SDCBPO00560 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SDCBPO00560 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SDCBPO00560 AL360270.2-201ENST00000562952 5985 ntBASIC4.87□□□□□ -1.63
SDCBPO00560 AC090181.3-201ENST00000624777 1514 ntBASIC4.87□□□□□ -1.63
SDCBPO00560 UGT2B24P-201ENST00000514441 1597 ntBASIC4.87□□□□□ -1.63
SDCBPO00560 AP001029.2-203ENST00000589795 4910 ntBASIC4.86□□□□□ -1.63
SDCBPO00560 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC4.86□□□□□ -1.63
SDCBPO00560 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC4.86□□□□□ -1.63
SDCBPO00560 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC4.86□□□□□ -1.63
SDCBPO00560 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SDCBPO00560 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC4.86□□□□□ -1.63
SDCBPO00560 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
SDCBPO00560 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SDCBPO00560 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SDCBPO00560 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC4.86□□□□□ -1.63
SDCBPO00560 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SDCBPO00560 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SDCBPO00560 RN7SKP145-201ENST00000363291 303 ntBASIC4.86□□□□□ -1.63
SDCBPO00560 RNU1-136P-201ENST00000384181 164 ntBASIC4.86□□□□□ -1.63
SDCBPO00560 VTI1BP4-201ENST00000427516 527 ntBASIC4.86□□□□□ -1.63
SDCBPO00560 NPM1P18-201ENST00000434232 732 ntBASIC4.86□□□□□ -1.63
SDCBPO00560 BMS1P10-201ENST00000443754 1120 ntBASIC4.86□□□□□ -1.63
SDCBPO00560 AC093166.3-201ENST00000448785 303 ntBASIC4.86□□□□□ -1.63
SDCBPO00560 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC4.86□□□□□ -1.63
SDCBPO00560 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC4.86□□□□□ -1.63
SDCBPO00560 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC4.86□□□□□ -1.63
SDCBPO00560 AC091874.2-201ENST00000505889 720 ntBASIC4.86□□□□□ -1.63
SDCBPO00560 AC018797.1-201ENST00000510791 255 ntBASIC4.86□□□□□ -1.63
SDCBPO00560 RN7SKP35-201ENST00000517210 151 ntBASIC4.86□□□□□ -1.63
SDCBPO00560 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC4.86□□□□□ -1.63
SDCBPO00560 AP003396.4-201ENST00000527574 265 ntBASIC4.86□□□□□ -1.63
SDCBPO00560 AP000619.2-201ENST00000546014 969 ntBASIC4.86□□□□□ -1.63
SDCBPO00560 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC4.86□□□□□ -1.63
SDCBPO00560 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC4.86□□□□□ -1.63
SDCBPO00560 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC4.86□□□□□ -1.63
SDCBPO00560 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC4.86□□□□□ -1.63
SDCBPO00560 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
SDCBPO00560 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC4.86□□□□□ -1.63
SDCBPO00560 AC092266.1-201ENST00000610958 165 ntBASIC4.86□□□□□ -1.63
SDCBPO00560 AL139099.4-201ENST00000614802 114 ntBASIC4.86□□□□□ -1.63
SDCBPO00560 AC048341.3-201ENST00000619323 491 ntBASIC4.86□□□□□ -1.63
SDCBPO00560 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SDCBPO00560 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC4.86□□□□□ -1.63
SDCBPO00560 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC4.86□□□□□ -1.63
SDCBPO00560 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
SDCBPO00560 GKN2-202ENST00000481498 1498 ntTSL 2 BASIC4.86□□□□□ -1.63
SDCBPO00560 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC4.86□□□□□ -1.63
SDCBPO00560 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
SDCBPO00560 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SDCBPO00560 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SDCBPO00560 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC4.85□□□□□ -1.63
SDCBPO00560 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms