Protein–RNA interactions for Protein: A0A0J9YWV2

TRBV4-1, T-cell receptor beta variable 4-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV4-1A0A0J9YWV2 DEFB109A-201ENST00000482450 265 ntBASIC5.32□□□□□ -1.56
TRBV4-1A0A0J9YWV2 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC5.32□□□□□ -1.56
TRBV4-1A0A0J9YWV2 AP002453.1-201ENST00000492327 668 ntBASIC5.32□□□□□ -1.56
TRBV4-1A0A0J9YWV2 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC5.32□□□□□ -1.56
TRBV4-1A0A0J9YWV2 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC5.32□□□□□ -1.56
TRBV4-1A0A0J9YWV2 GLUD1P3-202ENST00000508551 200 ntBASIC5.32□□□□□ -1.56
TRBV4-1A0A0J9YWV2 RNU6-1334P-201ENST00000516032 105 ntBASIC5.32□□□□□ -1.56
TRBV4-1A0A0J9YWV2 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC5.32□□□□□ -1.56
TRBV4-1A0A0J9YWV2 AP000620.1-201ENST00000527147 504 ntBASIC5.32□□□□□ -1.56
TRBV4-1A0A0J9YWV2 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC5.32□□□□□ -1.56
TRBV4-1A0A0J9YWV2 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.32□□□□□ -1.56
TRBV4-1A0A0J9YWV2 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC5.32□□□□□ -1.56
TRBV4-1A0A0J9YWV2 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC5.32□□□□□ -1.56
TRBV4-1A0A0J9YWV2 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC5.32□□□□□ -1.56
TRBV4-1A0A0J9YWV2 AC007346.1-201ENST00000569208 867 ntBASIC5.32□□□□□ -1.56
TRBV4-1A0A0J9YWV2 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.32□□□□□ -1.56
TRBV4-1A0A0J9YWV2 AL035661.1-201ENST00000620459 1144 ntBASIC5.32□□□□□ -1.56
TRBV4-1A0A0J9YWV2 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC5.32□□□□□ -1.56
TRBV4-1A0A0J9YWV2 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC5.32□□□□□ -1.56
TRBV4-1A0A0J9YWV2 AC073488.6-201ENST00000632293 754 ntBASIC5.32□□□□□ -1.56
TRBV4-1A0A0J9YWV2 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.32□□□□□ -1.56
TRBV4-1A0A0J9YWV2 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
TRBV4-1A0A0J9YWV2 ALB-220ENST00000621628 1606 ntTSL 5 BASIC5.32□□□□□ -1.56
TRBV4-1A0A0J9YWV2 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
TRBV4-1A0A0J9YWV2 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC5.32□□□□□ -1.56
TRBV4-1A0A0J9YWV2 USP40-202ENST00000409945 1946 ntTSL 2 BASIC5.32□□□□□ -1.56
TRBV4-1A0A0J9YWV2 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
TRBV4-1A0A0J9YWV2 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
TRBV4-1A0A0J9YWV2 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
TRBV4-1A0A0J9YWV2 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.32□□□□□ -1.56
TRBV4-1A0A0J9YWV2 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
TRBV4-1A0A0J9YWV2 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.32□□□□□ -1.56
TRBV4-1A0A0J9YWV2 PSG10P-201ENST00000501199 1500 ntBASIC5.32□□□□□ -1.56
TRBV4-1A0A0J9YWV2 AC104964.3-201ENST00000606115 2860 ntBASIC5.32□□□□□ -1.56
TRBV4-1A0A0J9YWV2 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
TRBV4-1A0A0J9YWV2 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.32□□□□□ -1.56
TRBV4-1A0A0J9YWV2 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
TRBV4-1A0A0J9YWV2 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.32□□□□□ -1.56
TRBV4-1A0A0J9YWV2 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
TRBV4-1A0A0J9YWV2 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC5.32□□□□□ -1.56
TRBV4-1A0A0J9YWV2 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
TRBV4-1A0A0J9YWV2 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
TRBV4-1A0A0J9YWV2 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
TRBV4-1A0A0J9YWV2 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
TRBV4-1A0A0J9YWV2 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
TRBV4-1A0A0J9YWV2 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.31□□□□□ -1.56
TRBV4-1A0A0J9YWV2 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.31□□□□□ -1.56
TRBV4-1A0A0J9YWV2 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
TRBV4-1A0A0J9YWV2 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.31□□□□□ -1.56
TRBV4-1A0A0J9YWV2 SAMMSON-210ENST00000641260 1308 ntBASIC5.31□□□□□ -1.56
TRBV4-1A0A0J9YWV2 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
TRBV4-1A0A0J9YWV2 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC5.31□□□□□ -1.56
TRBV4-1A0A0J9YWV2 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.31□□□□□ -1.56
TRBV4-1A0A0J9YWV2 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
TRBV4-1A0A0J9YWV2 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
TRBV4-1A0A0J9YWV2 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC5.31□□□□□ -1.56
TRBV4-1A0A0J9YWV2 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC5.31□□□□□ -1.56
TRBV4-1A0A0J9YWV2 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC5.31□□□□□ -1.56
TRBV4-1A0A0J9YWV2 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC5.31□□□□□ -1.56
TRBV4-1A0A0J9YWV2 RNGTTP1-201ENST00000420965 728 ntBASIC5.31□□□□□ -1.56
TRBV4-1A0A0J9YWV2 SETP9-201ENST00000423837 832 ntBASIC5.31□□□□□ -1.56
TRBV4-1A0A0J9YWV2 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC5.31□□□□□ -1.56
TRBV4-1A0A0J9YWV2 VN1R21P-201ENST00000426703 765 ntBASIC5.31□□□□□ -1.56
TRBV4-1A0A0J9YWV2 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC5.31□□□□□ -1.56
TRBV4-1A0A0J9YWV2 AL353662.1-201ENST00000439099 327 ntBASIC5.31□□□□□ -1.56
TRBV4-1A0A0J9YWV2 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.31□□□□□ -1.56
TRBV4-1A0A0J9YWV2 UBQLN1P1-207ENST00000441056 1169 ntBASIC5.31□□□□□ -1.56
TRBV4-1A0A0J9YWV2 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC5.31□□□□□ -1.56
TRBV4-1A0A0J9YWV2 BMS1P10-201ENST00000443754 1120 ntBASIC5.31□□□□□ -1.56
TRBV4-1A0A0J9YWV2 OR6C72P-201ENST00000451403 892 ntBASIC5.31□□□□□ -1.56
TRBV4-1A0A0J9YWV2 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC5.31□□□□□ -1.56
TRBV4-1A0A0J9YWV2 AL356390.1-201ENST00000455684 397 ntBASIC5.31□□□□□ -1.56
TRBV4-1A0A0J9YWV2 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC5.31□□□□□ -1.56
TRBV4-1A0A0J9YWV2 AC078785.2-201ENST00000462010 1253 ntTSL 3 BASIC5.31□□□□□ -1.56
TRBV4-1A0A0J9YWV2 AK5-208ENST00000478255 556 ntTSL 2 BASIC5.31□□□□□ -1.56
TRBV4-1A0A0J9YWV2 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC5.31□□□□□ -1.56
TRBV4-1A0A0J9YWV2 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC5.31□□□□□ -1.56
TRBV4-1A0A0J9YWV2 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC5.31□□□□□ -1.56
TRBV4-1A0A0J9YWV2 IGHVIII-76-1-201ENST00000523776 286 ntBASIC5.31□□□□□ -1.56
TRBV4-1A0A0J9YWV2 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.31□□□□□ -1.56
TRBV4-1A0A0J9YWV2 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC5.31□□□□□ -1.56
TRBV4-1A0A0J9YWV2 AL359232.1-202ENST00000556874 1206 ntTSL 2 BASIC5.31□□□□□ -1.56
TRBV4-1A0A0J9YWV2 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.31□□□□□ -1.56
TRBV4-1A0A0J9YWV2 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC5.31□□□□□ -1.56
TRBV4-1A0A0J9YWV2 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.31□□□□□ -1.56
TRBV4-1A0A0J9YWV2 AC068768.2-201ENST00000602352 343 ntBASIC5.31□□□□□ -1.56
TRBV4-1A0A0J9YWV2 AL583832.1-201ENST00000603227 784 ntBASIC5.31□□□□□ -1.56
TRBV4-1A0A0J9YWV2 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC5.31□□□□□ -1.56
TRBV4-1A0A0J9YWV2 AC145423.1-201ENST00000605712 336 ntBASIC5.31□□□□□ -1.56
TRBV4-1A0A0J9YWV2 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC5.31□□□□□ -1.56
TRBV4-1A0A0J9YWV2 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC5.31□□□□□ -1.56
TRBV4-1A0A0J9YWV2 OSTC-205ENST00000613215 876 ntTSL 2 BASIC5.31□□□□□ -1.56
TRBV4-1A0A0J9YWV2 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
TRBV4-1A0A0J9YWV2 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC5.31□□□□□ -1.56
TRBV4-1A0A0J9YWV2 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC5.31□□□□□ -1.56
TRBV4-1A0A0J9YWV2 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC5.31□□□□□ -1.56
TRBV4-1A0A0J9YWV2 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
TRBV4-1A0A0J9YWV2 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC5.31□□□□□ -1.56
TRBV4-1A0A0J9YWV2 Z95114.1-201ENST00000624264 14574 ntBASIC5.31□□□□□ -1.56
TRBV4-1A0A0J9YWV2 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms