Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 AP003392.5-201ENST00000607857 415 ntBASIC7.29□□□□□ -1.24
SHKBP1Q8TBC3 5S_rRNA.23-201ENST00000612086 102 ntBASIC7.29□□□□□ -1.24
SHKBP1Q8TBC3 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC7.29□□□□□ -1.24
SHKBP1Q8TBC3 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC7.29□□□□□ -1.24
SHKBP1Q8TBC3 AC006328.2-201ENST00000623198 397 ntBASIC7.29□□□□□ -1.24
SHKBP1Q8TBC3 AC012005.2-201ENST00000624333 397 ntBASIC7.29□□□□□ -1.24
SHKBP1Q8TBC3 FP325313.1-201ENST00000638228 703 ntBASIC7.29□□□□□ -1.24
SHKBP1Q8TBC3 GUSBP1-205ENST00000607545 4157 ntTSL 2 BASIC7.29□□□□□ -1.24
SHKBP1Q8TBC3 NBPF19-206ENST00000621744 14425 ntTSL 5 BASIC7.29□□□□□ -1.24
SHKBP1Q8TBC3 AC062029.1-202ENST00000606164 3651 ntBASIC7.29□□□□□ -1.24
SHKBP1Q8TBC3 ZNF846-202ENST00000586293 1621 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
SHKBP1Q8TBC3 NSUN6-201ENST00000377304 2201 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
SHKBP1Q8TBC3 MEPE-204ENST00000497649 2226 ntAPPRIS ALT2 TSL 5 BASIC7.29□□□□□ -1.24
SHKBP1Q8TBC3 USP32-214ENST00000592339 4045 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
SHKBP1Q8TBC3 LY75-201ENST00000263636 6886 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
SHKBP1Q8TBC3 RBM23-203ENST00000359890 10040 ntAPPRIS P4 TSL 1 (best) BASIC7.29□□□□□ -1.24
SHKBP1Q8TBC3 DSCAM-203ENST00000617870 6176 ntTSL 5 BASIC7.29□□□□□ -1.24
SHKBP1Q8TBC3 IARS-206ENST00000447699 4186 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
SHKBP1Q8TBC3 MC2R-201ENST00000327606 3656 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
SHKBP1Q8TBC3 CYP3A5-202ENST00000339843 3320 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
SHKBP1Q8TBC3 STARD4-AS1-201ENST00000500779 5525 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
SHKBP1Q8TBC3 AKR1C2-201ENST00000380753 3756 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
SHKBP1Q8TBC3 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
SHKBP1Q8TBC3 AC244100.2-202ENST00000612584 3878 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
SHKBP1Q8TBC3 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC7.28□□□□□ -1.24
SHKBP1Q8TBC3 POT1-AS1-203ENST00000435452 2147 ntTSL 2 BASIC7.28□□□□□ -1.24
SHKBP1Q8TBC3 SPARCL1-201ENST00000282470 2906 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
SHKBP1Q8TBC3 CLTC-210ENST00000579456 2301 ntTSL 5 BASIC7.28□□□□□ -1.24
SHKBP1Q8TBC3 ERVW-1-202ENST00000603053 2763 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
SHKBP1Q8TBC3 ANKRD20A10P-201ENST00000457591 1515 ntBASIC7.28□□□□□ -1.24
SHKBP1Q8TBC3 PIK3R3-202ENST00000372006 5019 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
SHKBP1Q8TBC3 THADA-204ENST00000403856 6939 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
SHKBP1Q8TBC3 PIGN-207ENST00000586566 3891 ntTSL 5 BASIC7.28□□□□□ -1.24
SHKBP1Q8TBC3 ARMCX5-202ENST00000372742 2647 ntAPPRIS P1 TSL 2 BASIC7.28□□□□□ -1.24
SHKBP1Q8TBC3 NFIB-221ENST00000637742 2166 ntTSL 5 BASIC7.28□□□□□ -1.24
SHKBP1Q8TBC3 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
SHKBP1Q8TBC3 CA5B-201ENST00000318636 6835 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
SHKBP1Q8TBC3 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
SHKBP1Q8TBC3 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC7.28□□□□□ -1.24
SHKBP1Q8TBC3 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
SHKBP1Q8TBC3 RNU6-1017P-201ENST00000363613 106 ntBASIC7.28□□□□□ -1.24
SHKBP1Q8TBC3 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC7.28□□□□□ -1.24
SHKBP1Q8TBC3 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC7.28□□□□□ -1.24
SHKBP1Q8TBC3 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC7.28□□□□□ -1.24
SHKBP1Q8TBC3 MIR181A2HG-201ENST00000429139 662 ntTSL 2 BASIC7.28□□□□□ -1.24
SHKBP1Q8TBC3 FGF12-202ENST00000430714 603 ntTSL 2 BASIC7.28□□□□□ -1.24
SHKBP1Q8TBC3 LSM3P3-201ENST00000436601 306 ntBASIC7.28□□□□□ -1.24
SHKBP1Q8TBC3 LRRC23-208ENST00000436789 796 ntTSL 3 BASIC7.28□□□□□ -1.24
SHKBP1Q8TBC3 AC114755.4-201ENST00000439114 443 ntBASIC7.28□□□□□ -1.24
SHKBP1Q8TBC3 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC7.28□□□□□ -1.24
SHKBP1Q8TBC3 OTX2P1-201ENST00000450956 354 ntBASIC7.28□□□□□ -1.24
SHKBP1Q8TBC3 AP002345.1-201ENST00000456493 928 ntBASIC7.28□□□□□ -1.24
SHKBP1Q8TBC3 AMD1P1-201ENST00000457220 922 ntBASIC7.28□□□□□ -1.24
SHKBP1Q8TBC3 RPS26P11-201ENST00000463445 348 ntBASIC7.28□□□□□ -1.24
SHKBP1Q8TBC3 RPS26P6-201ENST00000475156 348 ntBASIC7.28□□□□□ -1.24
SHKBP1Q8TBC3 AC104763.1-201ENST00000475274 360 ntBASIC7.28□□□□□ -1.24
SHKBP1Q8TBC3 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC7.28□□□□□ -1.24
SHKBP1Q8TBC3 AC093895.1-201ENST00000506480 821 ntTSL 3 BASIC7.28□□□□□ -1.24
SHKBP1Q8TBC3 AC113430.1-201ENST00000506872 718 ntBASIC7.28□□□□□ -1.24
SHKBP1Q8TBC3 AC146944.3-201ENST00000509969 371 ntBASIC7.28□□□□□ -1.24
SHKBP1Q8TBC3 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC7.28□□□□□ -1.24
SHKBP1Q8TBC3 AC138517.1-201ENST00000515724 568 ntBASIC7.28□□□□□ -1.24
SHKBP1Q8TBC3 Y_RNA.695-201ENST00000516715 107 ntBASIC7.28□□□□□ -1.24
SHKBP1Q8TBC3 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC7.28□□□□□ -1.24
SHKBP1Q8TBC3 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC7.28□□□□□ -1.24
SHKBP1Q8TBC3 BAALC-AS1-208ENST00000523614 582 ntTSL 5 BASIC7.28□□□□□ -1.24
SHKBP1Q8TBC3 OR8Q1P-201ENST00000526467 655 ntBASIC7.28□□□□□ -1.24
SHKBP1Q8TBC3 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC7.28□□□□□ -1.24
SHKBP1Q8TBC3 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC7.28□□□□□ -1.24
SHKBP1Q8TBC3 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC7.28□□□□□ -1.24
SHKBP1Q8TBC3 ZNF519P3-201ENST00000557158 1032 ntBASIC7.28□□□□□ -1.24
SHKBP1Q8TBC3 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC7.28□□□□□ -1.24
SHKBP1Q8TBC3 OR4G1P-201ENST00000588632 938 ntBASIC7.28□□□□□ -1.24
SHKBP1Q8TBC3 BNIP3P33-201ENST00000598912 569 ntBASIC7.28□□□□□ -1.24
SHKBP1Q8TBC3 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC7.28□□□□□ -1.24
SHKBP1Q8TBC3 AC079880.2-201ENST00000603790 1213 ntBASIC7.28□□□□□ -1.24
SHKBP1Q8TBC3 AL390877.1-201ENST00000605704 214 ntBASIC7.28□□□□□ -1.24
SHKBP1Q8TBC3 AC006566.1-201ENST00000608943 513 ntBASIC7.28□□□□□ -1.24
SHKBP1Q8TBC3 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
SHKBP1Q8TBC3 AC138932.5-201ENST00000617759 563 ntBASIC7.28□□□□□ -1.24
SHKBP1Q8TBC3 AC022079.2-201ENST00000619739 566 ntBASIC7.28□□□□□ -1.24
SHKBP1Q8TBC3 AC092794.2-201ENST00000620933 563 ntBASIC7.28□□□□□ -1.24
SHKBP1Q8TBC3 MIR6823-201ENST00000622118 61 ntBASIC7.28□□□□□ -1.24
SHKBP1Q8TBC3 MIR7515HG-257ENST00000625915 852 ntTSL 5 BASIC7.28□□□□□ -1.24
SHKBP1Q8TBC3 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC7.28□□□□□ -1.24
SHKBP1Q8TBC3 CASC19-274ENST00000642018 970 ntBASIC7.28□□□□□ -1.24
SHKBP1Q8TBC3 TP63-207ENST00000418709 2810 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
SHKBP1Q8TBC3 AC107980.1-201ENST00000558671 3355 ntBASIC7.28□□□□□ -1.24
SHKBP1Q8TBC3 PDE4DIP-206ENST00000369356 8307 ntAPPRIS P4 TSL 1 (best) BASIC7.28□□□□□ -1.24
SHKBP1Q8TBC3 ZNF107-206ENST00000620827 5685 ntAPPRIS P4 TSL 4 BASIC7.28□□□□□ -1.24
SHKBP1Q8TBC3 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
SHKBP1Q8TBC3 EEF1A1P33-201ENST00000554413 1362 ntBASIC7.28□□□□□ -1.24
SHKBP1Q8TBC3 ZNF160-208ENST00000599056 4229 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
SHKBP1Q8TBC3 LINC01252-201ENST00000499291 3673 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
SHKBP1Q8TBC3 INTS7-204ENST00000440600 3136 ntTSL 2 BASIC7.28□□□□□ -1.24
SHKBP1Q8TBC3 CNTNAP2-203ENST00000463592 6076 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
SHKBP1Q8TBC3 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC7.28□□□□□ -1.24
SHKBP1Q8TBC3 TAT-201ENST00000355962 3983 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
SHKBP1Q8TBC3 USP1-202ENST00000371146 3507 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
SHKBP1Q8TBC3 FHL1-227ENST00000628568 2304 ntTSL 5 BASIC7.28□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms