Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC6.58□□□□□ -1.36
TRIM48Q8IWZ4 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
TRIM48Q8IWZ4 AC013403.1-201ENST00000436954 263 ntBASIC6.58□□□□□ -1.36
TRIM48Q8IWZ4 NFIA-AS2-203ENST00000438559 1275 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
TRIM48Q8IWZ4 AC064862.5-201ENST00000440618 334 ntBASIC6.58□□□□□ -1.36
TRIM48Q8IWZ4 RPL12P49-201ENST00000441100 121 ntBASIC6.58□□□□□ -1.36
TRIM48Q8IWZ4 MIR4432HG-201ENST00000441598 470 ntTSL 3 BASIC6.58□□□□□ -1.36
TRIM48Q8IWZ4 RPS27P5-201ENST00000444247 244 ntBASIC6.58□□□□□ -1.36
TRIM48Q8IWZ4 AL589880.1-201ENST00000448271 287 ntBASIC6.58□□□□□ -1.36
TRIM48Q8IWZ4 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC6.58□□□□□ -1.36
TRIM48Q8IWZ4 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC6.58□□□□□ -1.36
TRIM48Q8IWZ4 KF459542.1-201ENST00000450908 553 ntBASIC6.58□□□□□ -1.36
TRIM48Q8IWZ4 AKR1D1P1-201ENST00000457236 936 ntBASIC6.58□□□□□ -1.36
TRIM48Q8IWZ4 USP9YP25-201ENST00000457708 443 ntBASIC6.58□□□□□ -1.36
TRIM48Q8IWZ4 RN7SL393P-201ENST00000463588 296 ntBASIC6.58□□□□□ -1.36
TRIM48Q8IWZ4 AC129807.1-201ENST00000471614 591 ntTSL 4 BASIC6.58□□□□□ -1.36
TRIM48Q8IWZ4 AC011037.1-201ENST00000483964 558 ntBASIC6.58□□□□□ -1.36
TRIM48Q8IWZ4 AC015524.1-201ENST00000491585 472 ntBASIC6.58□□□□□ -1.36
TRIM48Q8IWZ4 EIF4E2P2-201ENST00000492033 736 ntBASIC6.58□□□□□ -1.36
TRIM48Q8IWZ4 AC114324.2-202ENST00000503812 134 ntBASIC6.58□□□□□ -1.36
TRIM48Q8IWZ4 LAMTOR3P2-201ENST00000504479 232 ntBASIC6.58□□□□□ -1.36
TRIM48Q8IWZ4 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC6.58□□□□□ -1.36
TRIM48Q8IWZ4 AC139713.2-204ENST00000511042 342 ntTSL 5 BASIC6.58□□□□□ -1.36
TRIM48Q8IWZ4 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC6.58□□□□□ -1.36
TRIM48Q8IWZ4 AC007068.2-201ENST00000543168 395 ntBASIC6.58□□□□□ -1.36
TRIM48Q8IWZ4 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC6.58□□□□□ -1.36
TRIM48Q8IWZ4 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC6.58□□□□□ -1.36
TRIM48Q8IWZ4 MIR4732-201ENST00000581873 76 ntBASIC6.58□□□□□ -1.36
TRIM48Q8IWZ4 RN7SL622P-201ENST00000585292 275 ntBASIC6.58□□□□□ -1.36
TRIM48Q8IWZ4 AC023421.2-202ENST00000586213 547 ntTSL 3 BASIC6.58□□□□□ -1.36
TRIM48Q8IWZ4 AC015802.2-201ENST00000589690 189 ntBASIC6.58□□□□□ -1.36
TRIM48Q8IWZ4 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC6.58□□□□□ -1.36
TRIM48Q8IWZ4 AP001269.1-201ENST00000592820 528 ntTSL 4 BASIC6.58□□□□□ -1.36
TRIM48Q8IWZ4 AC020914.2-201ENST00000598220 430 ntTSL 4 BASIC6.58□□□□□ -1.36
TRIM48Q8IWZ4 HNRNPA3P9-201ENST00000604913 979 ntBASIC6.58□□□□□ -1.36
TRIM48Q8IWZ4 AC022106.1-201ENST00000612834 766 ntBASIC6.58□□□□□ -1.36
TRIM48Q8IWZ4 MIR7854-201ENST00000620068 65 ntBASIC6.58□□□□□ -1.36
TRIM48Q8IWZ4 AC026124.2-201ENST00000621847 656 ntBASIC6.58□□□□□ -1.36
TRIM48Q8IWZ4 AC068213.1-201ENST00000625124 226 ntBASIC6.58□□□□□ -1.36
TRIM48Q8IWZ4 LINC01646-202ENST00000634256 1107 ntTSL 5 BASIC6.58□□□□□ -1.36
TRIM48Q8IWZ4 PMFBP1-202ENST00000355636 3501 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
TRIM48Q8IWZ4 CS-201ENST00000351328 2975 ntAPPRIS P2 TSL 1 (best) BASIC6.58□□□□□ -1.36
TRIM48Q8IWZ4 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
TRIM48Q8IWZ4 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC6.58□□□□□ -1.36
TRIM48Q8IWZ4 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
TRIM48Q8IWZ4 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
TRIM48Q8IWZ4 ZNF559-ZNF177-203ENST00000541595 2435 ntAPPRIS P3 TSL 2 BASIC6.58□□□□□ -1.36
TRIM48Q8IWZ4 AC007993.1-201ENST00000621298 2430 ntBASIC6.58□□□□□ -1.36
TRIM48Q8IWZ4 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
TRIM48Q8IWZ4 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
TRIM48Q8IWZ4 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC6.58□□□□□ -1.36
TRIM48Q8IWZ4 NUMB-203ENST00000359560 3309 ntAPPRIS P3 TSL 5 BASIC6.58□□□□□ -1.36
TRIM48Q8IWZ4 AC104454.1-201ENST00000421341 1401 ntBASIC6.58□□□□□ -1.36
TRIM48Q8IWZ4 AL359715.3-201ENST00000569267 2123 ntBASIC6.58□□□□□ -1.36
TRIM48Q8IWZ4 OR5T2-202ENST00000641661 2062 ntAPPRIS ALT2 BASIC6.57□□□□□ -1.36
TRIM48Q8IWZ4 LINC02044-201ENST00000490139 2502 ntTSL 2 BASIC6.57□□□□□ -1.36
TRIM48Q8IWZ4 C2CD5-212ENST00000542676 3438 ntTSL 2 BASIC6.57□□□□□ -1.36
TRIM48Q8IWZ4 KLRD1-203ENST00000350274 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
TRIM48Q8IWZ4 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
TRIM48Q8IWZ4 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC6.57□□□□□ -1.36
TRIM48Q8IWZ4 UGT2B24P-201ENST00000514441 1597 ntBASIC6.57□□□□□ -1.36
TRIM48Q8IWZ4 AC007114.2-201ENST00000576014 4281 ntBASIC6.57□□□□□ -1.36
TRIM48Q8IWZ4 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC6.57□□□□□ -1.36
TRIM48Q8IWZ4 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
TRIM48Q8IWZ4 AL357568.1-201ENST00000421530 1963 ntTSL 2 BASIC6.57□□□□□ -1.36
TRIM48Q8IWZ4 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
TRIM48Q8IWZ4 ADH1B-201ENST00000305046 4072 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
TRIM48Q8IWZ4 WBP11P1-201ENST00000562560 1931 ntBASIC6.57□□□□□ -1.36
TRIM48Q8IWZ4 TAS2R42-201ENST00000334266 945 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
TRIM48Q8IWZ4 SNORD56.4-201ENST00000363883 71 ntBASIC6.57□□□□□ -1.36
TRIM48Q8IWZ4 RNU6-1251P-201ENST00000364502 107 ntBASIC6.57□□□□□ -1.36
TRIM48Q8IWZ4 U6.112-201ENST00000384129 70 ntBASIC6.57□□□□□ -1.36
TRIM48Q8IWZ4 Y_RNA.472-201ENST00000384322 102 ntBASIC6.57□□□□□ -1.36
TRIM48Q8IWZ4 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC6.57□□□□□ -1.36
TRIM48Q8IWZ4 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
TRIM48Q8IWZ4 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC6.57□□□□□ -1.36
TRIM48Q8IWZ4 LINC00575-201ENST00000426551 910 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
TRIM48Q8IWZ4 AC005083.1-202ENST00000430859 740 ntTSL 2 BASIC6.57□□□□□ -1.36
TRIM48Q8IWZ4 GAPDHP19-201ENST00000431768 1005 ntBASIC6.57□□□□□ -1.36
TRIM48Q8IWZ4 UBE2D3P1-201ENST00000436669 444 ntBASIC6.57□□□□□ -1.36
TRIM48Q8IWZ4 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC6.57□□□□□ -1.36
TRIM48Q8IWZ4 LAPTM4BP1-201ENST00000447781 690 ntBASIC6.57□□□□□ -1.36
TRIM48Q8IWZ4 AL096803.2-201ENST00000450032 677 ntBASIC6.57□□□□□ -1.36
TRIM48Q8IWZ4 NPM1P19-201ENST00000450070 712 ntBASIC6.57□□□□□ -1.36
TRIM48Q8IWZ4 AC108676.1-201ENST00000455557 2969 ntTSL 2 BASIC6.57□□□□□ -1.36
TRIM48Q8IWZ4 RN7SL83P-201ENST00000468131 297 ntBASIC6.57□□□□□ -1.36
TRIM48Q8IWZ4 AC093719.1-201ENST00000480427 441 ntBASIC6.57□□□□□ -1.36
TRIM48Q8IWZ4 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC6.57□□□□□ -1.36
TRIM48Q8IWZ4 TAS2R50-201ENST00000506868 1000 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
TRIM48Q8IWZ4 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC6.57□□□□□ -1.36
TRIM48Q8IWZ4 AL390198.2-201ENST00000510553 222 ntBASIC6.57□□□□□ -1.36
TRIM48Q8IWZ4 AC011352.2-201ENST00000514574 1016 ntBASIC6.57□□□□□ -1.36
TRIM48Q8IWZ4 AC087672.3-201ENST00000519323 738 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
TRIM48Q8IWZ4 OR9L1P-201ENST00000529493 933 ntBASIC6.57□□□□□ -1.36
TRIM48Q8IWZ4 OR9G2P-201ENST00000533326 880 ntBASIC6.57□□□□□ -1.36
TRIM48Q8IWZ4 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
TRIM48Q8IWZ4 BTG1P1-201ENST00000540396 508 ntBASIC6.57□□□□□ -1.36
TRIM48Q8IWZ4 AP003717.3-201ENST00000544832 1180 ntBASIC6.57□□□□□ -1.36
TRIM48Q8IWZ4 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC6.57□□□□□ -1.36
TRIM48Q8IWZ4 TRIM69-208ENST00000560442 1262 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms