Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 AC092681.3-201ENST00000609463 678 ntBASIC5.89□□□□□ -1.47
ZNF549Q6P9A3 AC104307.1-201ENST00000616142 196 ntBASIC5.89□□□□□ -1.47
ZNF549Q6P9A3 FAM27E2-201ENST00000619668 403 ntBASIC5.89□□□□□ -1.47
ZNF549Q6P9A3 AC006249.1-201ENST00000621223 471 ntBASIC5.89□□□□□ -1.47
ZNF549Q6P9A3 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
ZNF549Q6P9A3 USP40-202ENST00000409945 1946 ntTSL 2 BASIC5.89□□□□□ -1.47
ZNF549Q6P9A3 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC5.89□□□□□ -1.47
ZNF549Q6P9A3 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
ZNF549Q6P9A3 MTND5P12-201ENST00000502851 1449 ntBASIC5.89□□□□□ -1.47
ZNF549Q6P9A3 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
ZNF549Q6P9A3 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC5.89□□□□□ -1.47
ZNF549Q6P9A3 AL359955.1-201ENST00000455242 3275 ntBASIC5.89□□□□□ -1.47
ZNF549Q6P9A3 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
ZNF549Q6P9A3 AC090181.3-201ENST00000624777 1514 ntBASIC5.89□□□□□ -1.47
ZNF549Q6P9A3 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
ZNF549Q6P9A3 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
ZNF549Q6P9A3 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC5.88□□□□□ -1.47
ZNF549Q6P9A3 AP000641.1-201ENST00000531988 1639 ntBASIC5.88□□□□□ -1.47
ZNF549Q6P9A3 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
ZNF549Q6P9A3 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC5.88□□□□□ -1.47
ZNF549Q6P9A3 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
ZNF549Q6P9A3 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
ZNF549Q6P9A3 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
ZNF549Q6P9A3 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.88□□□□□ -1.47
ZNF549Q6P9A3 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
ZNF549Q6P9A3 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC5.88□□□□□ -1.47
ZNF549Q6P9A3 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
ZNF549Q6P9A3 AL354692.1-201ENST00000423044 315 ntBASIC5.88□□□□□ -1.47
ZNF549Q6P9A3 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC5.88□□□□□ -1.47
ZNF549Q6P9A3 RPL17P35-201ENST00000432217 549 ntBASIC5.88□□□□□ -1.47
ZNF549Q6P9A3 PNKDP1-201ENST00000435914 430 ntBASIC5.88□□□□□ -1.47
ZNF549Q6P9A3 AL663074.2-201ENST00000440621 479 ntBASIC5.88□□□□□ -1.47
ZNF549Q6P9A3 AC097463.1-201ENST00000447288 481 ntBASIC5.88□□□□□ -1.47
ZNF549Q6P9A3 AL445466.1-201ENST00000448432 357 ntBASIC5.88□□□□□ -1.47
ZNF549Q6P9A3 OR52I1-201ENST00000450052 1050 ntBASIC5.88□□□□□ -1.47
ZNF549Q6P9A3 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC5.88□□□□□ -1.47
ZNF549Q6P9A3 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC5.88□□□□□ -1.47
ZNF549Q6P9A3 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC5.88□□□□□ -1.47
ZNF549Q6P9A3 AC008629.2-201ENST00000503783 483 ntBASIC5.88□□□□□ -1.47
ZNF549Q6P9A3 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC5.88□□□□□ -1.47
ZNF549Q6P9A3 HSD3BP3-201ENST00000514706 994 ntBASIC5.88□□□□□ -1.47
ZNF549Q6P9A3 snoU109.5-201ENST00000516231 132 ntBASIC5.88□□□□□ -1.47
ZNF549Q6P9A3 SNORA81.2-201ENST00000516868 170 ntBASIC5.88□□□□□ -1.47
ZNF549Q6P9A3 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC5.88□□□□□ -1.47
ZNF549Q6P9A3 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC5.88□□□□□ -1.47
ZNF549Q6P9A3 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC5.88□□□□□ -1.47
ZNF549Q6P9A3 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
ZNF549Q6P9A3 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC5.88□□□□□ -1.47
ZNF549Q6P9A3 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC5.88□□□□□ -1.47
ZNF549Q6P9A3 AC092332.1-201ENST00000563684 829 ntBASIC5.88□□□□□ -1.47
ZNF549Q6P9A3 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC5.88□□□□□ -1.47
ZNF549Q6P9A3 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC5.88□□□□□ -1.47
ZNF549Q6P9A3 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC5.88□□□□□ -1.47
ZNF549Q6P9A3 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC5.88□□□□□ -1.47
ZNF549Q6P9A3 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC5.88□□□□□ -1.47
ZNF549Q6P9A3 AC242628.1-201ENST00000606810 391 ntBASIC5.88□□□□□ -1.47
ZNF549Q6P9A3 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC5.88□□□□□ -1.47
ZNF549Q6P9A3 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC5.88□□□□□ -1.47
ZNF549Q6P9A3 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC5.88□□□□□ -1.47
ZNF549Q6P9A3 AC004801.6-201ENST00000616571 978 ntBASIC5.88□□□□□ -1.47
ZNF549Q6P9A3 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
ZNF549Q6P9A3 AL136228.1-201ENST00000622221 319 ntBASIC5.88□□□□□ -1.47
ZNF549Q6P9A3 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC5.88□□□□□ -1.47
ZNF549Q6P9A3 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
ZNF549Q6P9A3 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
ZNF549Q6P9A3 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.88□□□□□ -1.47
ZNF549Q6P9A3 RBPJP7-201ENST00000442803 1447 ntBASIC5.88□□□□□ -1.47
ZNF549Q6P9A3 RBPJP5-201ENST00000449433 1447 ntBASIC5.88□□□□□ -1.47
ZNF549Q6P9A3 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
ZNF549Q6P9A3 MSL3P1-202ENST00000440028 1468 ntBASIC5.88□□□□□ -1.47
ZNF549Q6P9A3 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
ZNF549Q6P9A3 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC5.88□□□□□ -1.47
ZNF549Q6P9A3 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
ZNF549Q6P9A3 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
ZNF549Q6P9A3 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC5.88□□□□□ -1.47
ZNF549Q6P9A3 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
ZNF549Q6P9A3 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
ZNF549Q6P9A3 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.88□□□□□ -1.47
ZNF549Q6P9A3 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.87□□□□□ -1.47
ZNF549Q6P9A3 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC5.87□□□□□ -1.47
ZNF549Q6P9A3 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
ZNF549Q6P9A3 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.87□□□□□ -1.47
ZNF549Q6P9A3 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC5.87□□□□□ -1.47
ZNF549Q6P9A3 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
ZNF549Q6P9A3 RNA5SP232-201ENST00000364144 119 ntBASIC5.87□□□□□ -1.47
ZNF549Q6P9A3 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC5.87□□□□□ -1.47
ZNF549Q6P9A3 MGST1-205ENST00000396210 914 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
ZNF549Q6P9A3 KIF4CP-201ENST00000422742 1279 ntBASIC5.87□□□□□ -1.47
ZNF549Q6P9A3 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC5.87□□□□□ -1.47
ZNF549Q6P9A3 BX119904.3-201ENST00000428194 957 ntBASIC5.87□□□□□ -1.47
ZNF549Q6P9A3 MTCYBP15-201ENST00000433123 1127 ntBASIC5.87□□□□□ -1.47
ZNF549Q6P9A3 AL445928.1-201ENST00000435545 222 ntBASIC5.87□□□□□ -1.47
ZNF549Q6P9A3 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC5.87□□□□□ -1.47
ZNF549Q6P9A3 OSTCP1-201ENST00000455507 450 ntBASIC5.87□□□□□ -1.47
ZNF549Q6P9A3 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC5.87□□□□□ -1.47
ZNF549Q6P9A3 PFN1P6-201ENST00000476786 399 ntBASIC5.87□□□□□ -1.47
ZNF549Q6P9A3 AC025181.1-201ENST00000477507 416 ntBASIC5.87□□□□□ -1.47
ZNF549Q6P9A3 AC021006.1-201ENST00000489849 553 ntBASIC5.87□□□□□ -1.47
ZNF549Q6P9A3 AC114322.1-201ENST00000506771 926 ntBASIC5.87□□□□□ -1.47
ZNF549Q6P9A3 AC010460.2-201ENST00000509054 677 ntBASIC5.87□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms